Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008101
CDS Infomation

pacid=37436072 polypeptide=PGSC0003DMP400005638 locus=PGSC0003DMG400003122 ID=PGSC0003DMT400008101.v4.03 annot-version=v4.03
Sequence

ATGACTTCCGCCGGCCTGCTCCTCCGACCACTACGTCGTTCTGCCCATAAAATTTTTGCT
TCCAACACCAAGCCTTCATGGTGCCCATCACATTTTGGTGCTAAATGGGATGGTCTAGCT
AGACCATTCAGCTCTAAACCTGCTGGAAATGAAATTATTGGGATTGACTTGGGTACGACC
AACTCTTGTGTTTCTGTGATGGAGGGGAAGAATCCTAAAGTCATTGAGAATGCTGAGGGG
GCAAGAACAACTCCTTCCGTGGTTGCGTTTAACCAGAAGGGGGAACGACTTGTTGGTACT
CCAGCCAAGCGTCAGGCAGTGACCAATCCTGCAAACACACTTTCCGGGACCAAGCGTCTA
ATTGGTAGACGCTTTGACGATACTCAAACGCAAAAGGAGATGAAGATGGTTCCTTACAAG
ATTGTGAGAGGCTCAAATGGAGATGCTTGGCTTGAAGCAAATGGACAACAATATTCTCCA
AGCCAAATTGGAGCATTTGTTCTAACAAAGATGAAGGAAACTGCAGAAGCCTACCTAGGG
AAATCTATTAGTAAAGCTGTGGTCACTGTTCCAGCTTATTTCAATGATGCTCAGAGGCAG
GCAACAAAGGATGCTGGGCGAATTGCAGGTCTTGATGTGCAAAGGATTATTAATGAGCCT
ACTGCAGCTGCGCTCTCTTATGGTATGAACAACAAAGAAGGTCTTGTTGCTGTTTTTGAT
CTAGGTGGTGGAACTTTTGATGTTTCAATTCTGGAGATATCAAATGGCGTTTTTGAAGTC
AAGGCAACCAATGGTGACACCTTTCTAGGAGGAGAGGATTTTGACAACGCATTGTTAGAG
TTTTTAGTGAGCGAGTTCAAGAGGACTGAGGGAATTGACCTATCAAAAGACAAGCTTGCC
CTACAAAGACTTCGAGAGGCAGCTGAGAAAGCTAAGATAGAGCTTTCATCAACATCTCAA
ACTGATATTAACTTGCCGTTCATCACAGCTGATGCATCAGGGGCTAAACATCTTAATATC
ACACTGACAAGATCAAAATTTGAGACATTGGTGAACCACTTAATTGAGAGGACAAGGAAT
CCTTGCAAGAATTGTTTGAAGGATGCTGGAGTATCTTTAAAAGATGTGGATGAGGTCCTC
CTTGTTGGAGGTATGACTCGGGTTCCTAAGGTGCAGGAAATAGTTTCTGAGATATTTGGT
AAAAGCCCAAGCAAAGGTGTCAATCCAGATGAGGCAGTTGCCATGGGAGCGGCGCTTCAA
GGTGGTATTCTCGGTGGCAACGTTAAAGAGTTGCTTCTTTTGGATGTAACTCCGCTATCT
CTCGGTATTGAGACATTGGGAGGTATCTTTACCAGGTTAATTAACAGGAATACCACCATT
CCCACAAAGAAGAGTCAGGTGTTTTCTACTGCTGCTGACAACCAAACTCAAGTGGGCATT
AAGGTATTACAAGGTGAACGTGAAATGGCATCTGACAATAAGATTTTAGGTGAATTCGAA
CTTGTAGGTCTTCCTCCGGCGCCAAGAGGCATGCCTCAGATAGAGGTCATGTTTGACATA
GATGCAAATGGAATGGTCACTGTGTCCGCCAAGGATAAGGCTACTGGCAAAGAGCAGCAG
ATCAGCATCCGGTCATCTGGTGGTCTGTCGGAAGATGAGATAAACAAGATGGTCAGGGAA
GCTGAGATGCATGCCCAGAAGGATCAAGAGCGCAAGACACTTATTGATCTCAGGAACAGT
GCAGATACTACCATATACAGCATTGAAAAGAGCTTGAATGAATACAGGGACAAGGTCCCC
GCAGAGGTGGTTACAGAAATTGAGACAGCTGTTTCGGACTTGAGAGCAGCAATGGGGACT
GAAAACATTGATGATATCAAGTCGAAACTTGATGCAGCAAACAAAGCTGTTTCCAAGATT
GGAGAGCACATGACCGGCGGCGGTTCTGGTGGTGCGTCCAGTGGTTCACAAGGAGGAGAT
CAATCACCACCTGAGGCGGCTGAATACGAGGAAGTGAAGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400005638
PEP Infomation

pacid=37436072 transcript=PGSC0003DMT400008101 locus=PGSC0003DMG400003122 ID=PGSC0003DMT400008101.v4.03 annot-version=v4.03
Sequence

MTSAGLLLRPLRRSAHKIFASNTKPSWCPSHFGAKWDGLARPFSSKPAGNEIIGIDLGTT
NSCVSVMEGKNPKVIENAEGARTTPSVVAFNQKGERLVGTPAKRQAVTNPANTLSGTKRL
IGRRFDDTQTQKEMKMVPYKIVRGSNGDAWLEANGQQYSPSQIGAFVLTKMKETAEAYLG
KSISKAVVTVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLVAVFD
LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTEGIDLSKDKLA
LQRLREAAEKAKIELSSTSQTDINLPFITADASGAKHLNITLTRSKFETLVNHLIERTRN
PCKNCLKDAGVSLKDVDEVLLVGGMTRVPKVQEIVSEIFGKSPSKGVNPDEAVAMGAALQ
GGILGGNVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGI
KVLQGEREMASDNKILGEFELVGLPPAPRGMPQIEVMFDIDANGMVTVSAKDKATGKEQQ
ISIRSSGGLSEDEINKMVREAEMHAQKDQERKTLIDLRNSADTTIYSIEKSLNEYRDKVP
AEVVTEIETAVSDLRAAMGTENIDDIKSKLDAANKAVSKIGEHMTGGGSGGASSGSQGGD
QSPPEAAEYEEVKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400008101
Transcript Infomation

pacid=37436072 locus=PGSC0003DMG400003122 ID=PGSC0003DMT400008101.v4.03 annot-version=v4.03
Sequence

ATGACTTCCGCCGGCCTGCTCCTCCGACCACTACGTCGTTCTGCCCATAAAATTTTTGCT
TCCAACACCAAGCCTTCATGGTGCCCATCACATTTTGGTGCTAAATGGGATGGTCTAGCT
AGACCATTCAGCTCTAAACCTGCTGGAAATGAAATTATTGGGATTGACTTGGGTACGACC
AACTCTTGTGTTTCTGTGATGGAGGGGAAGAATCCTAAAGTCATTGAGAATGCTGAGGGG
GCAAGAACAACTCCTTCCGTGGTTGCGTTTAACCAGAAGGGGGAACGACTTGTTGGTACT
CCAGCCAAGCGTCAGGCAGTGACCAATCCTGCAAACACACTTTCCGGGACCAAGCGTCTA
ATTGGTAGACGCTTTGACGATACTCAAACGCAAAAGGAGATGAAGATGGTTCCTTACAAG
ATTGTGAGAGGCTCAAATGGAGATGCTTGGCTTGAAGCAAATGGACAACAATATTCTCCA
AGCCAAATTGGAGCATTTGTTCTAACAAAGATGAAGGAAACTGCAGAAGCCTACCTAGGG
AAATCTATTAGTAAAGCTGTGGTCACTGTTCCAGCTTATTTCAATGATGCTCAGAGGCAG
GCAACAAAGGATGCTGGGCGAATTGCAGGTCTTGATGTGCAAAGGATTATTAATGAGCCT
ACTGCAGCTGCGCTCTCTTATGGTATGAACAACAAAGAAGGTCTTGTTGCTGTTTTTGAT
CTAGGTGGTGGAACTTTTGATGTTTCAATTCTGGAGATATCAAATGGCGTTTTTGAAGTC
AAGGCAACCAATGGTGACACCTTTCTAGGAGGAGAGGATTTTGACAACGCATTGTTAGAG
TTTTTAGTGAGCGAGTTCAAGAGGACTGAGGGAATTGACCTATCAAAAGACAAGCTTGCC
CTACAAAGACTTCGAGAGGCAGCTGAGAAAGCTAAGATAGAGCTTTCATCAACATCTCAA
ACTGATATTAACTTGCCGTTCATCACAGCTGATGCATCAGGGGCTAAACATCTTAATATC
ACACTGACAAGATCAAAATTTGAGACATTGGTGAACCACTTAATTGAGAGGACAAGGAAT
CCTTGCAAGAATTGTTTGAAGGATGCTGGAGTATCTTTAAAAGATGTGGATGAGGTCCTC
CTTGTTGGAGGTATGACTCGGGTTCCTAAGGTGCAGGAAATAGTTTCTGAGATATTTGGT
AAAAGCCCAAGCAAAGGTGTCAATCCAGATGAGGCAGTTGCCATGGGAGCGGCGCTTCAA
GGTGGTATTCTCGGTGGCAACGTTAAAGAGTTGCTTCTTTTGGATGTAACTCCGCTATCT
CTCGGTATTGAGACATTGGGAGGTATCTTTACCAGGTTAATTAACAGGAATACCACCATT
CCCACAAAGAAGAGTCAGGTGTTTTCTACTGCTGCTGACAACCAAACTCAAGTGGGCATT
AAGGTATTACAAGGTGAACGTGAAATGGCATCTGACAATAAGATTTTAGGTGAATTCGAA
CTTGTAGGTCTTCCTCCGGCGCCAAGAGGCATGCCTCAGATAGAGGTCATGTTTGACATA
GATGCAAATGGAATGGTCACTGTGTCCGCCAAGGATAAGGCTACTGGCAAAGAGCAGCAG
ATCAGCATCCGGTCATCTGGTGGTCTGTCGGAAGATGAGATAAACAAGATGGTCAGGGAA
GCTGAGATGCATGCCCAGAAGGATCAAGAGCGCAAGACACTTATTGATCTCAGGAACAGT
GCAGATACTACCATATACAGCATTGAAAAGAGCTTGAATGAATACAGGGACAAGGTCCCC
GCAGAGGTGGTTACAGAAATTGAGACAGCTGTTTCGGACTTGAGAGCAGCAATGGGGACT
GAAAACATTGATGATATCAAGTCGAAACTTGATGCAGCAAACAAAGCTGTTTCCAAGATT
GGAGAGCACATGACCGGCGGCGGTTCTGGTGGTGCGTCCAGTGGTTCACAAGGAGGAGAT
CAATCACCACCTGAGGCGGCTGAATACGAGGAAGTGAAGAAATAA