Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008093
CDS Infomation

pacid=37435411 polypeptide=PGSC0003DMP400005631 locus=PGSC0003DMG400003120 ID=PGSC0003DMT400008093.v4.03 annot-version=v4.03
Sequence

ATGGGGAAAAAGCAAATAATGTTGCCGGCGAATGAAGTAGACCTTACTGCAGTCAAATAT
GTGCCCGAAAAAATTGAAGCTCCACATTTGACGGGGCTTTGGTTCAAGTTGTTTGTTAAA
GTAATGGAGGCACCTGTAATTGGTTCTTTAATTGCTAGTCATCTGAAGGAGAAGAATGGG
ATTACTGAGATTCTGAAGAATACTGTGATACCAGAGGTTCCCATGTTCATTCCCCAATTT
CCTCTTCAAGAGCCAGAGCCTGGTGTTGTTTGCTTAGAAGAAGATGGAAAACCTGAAGAA
CGGGTTGCTTTAGCATTGAAGTGTCTTCCACATTATGATCCTACTTGCAGATGGAGTTCT
GATTCAGGAGAACCATTCCAATTCCGCTATTGGAAAATTCGTGATTATGGATATGCTTAC
AGATCTAAGCTTACGACCCCATCTATGGTTGCAGAACACTTTATCTCAGCAATGGAGGTA
TTTAATAGTAAGCAGCAATCAGCACCACTATTAATCTCATTTGACCCCGAGGAAGTGAGA
AGGCAAGCGGCAGCTTCCACTCAAAGATTTGAGGAAGGAAACCCGTTGTCAATCTTGGAT
GGGATTTTCACTGCAGTCAAGGATGACATTGATTGCTATCCTCATCCTTCAAAGGGTGGT
TCTAAATGGTTTCATGAGGTTCGCCAGGTAAAGGCAGATGGGGTTTCTGTGTCAAGATTA
CGAAACAGTGGTGCAATTTTAGTAGGAAAGACAAATATGCATGAGTTTGGTATGGGCACA
ACAGGAAATAATCCAAATTACGGTACACCTGGAAATCCGCATAATCCAAAAAGGTACACA
GGTGGTTCTTCCTCAGGTTCAGCTGCAATTGTTGCTTCTGGATTGTGCTCAGCAGCATTG
GGAACAGATGGTGGAGGTTCAGTACGAATTCCTGCTTCTCTTTGCGGGGTTGTGGGCTTG
AAAACAACATTTGGACGGACTGACCTGACAGGGTCACTGTGGGAAGCAGGAACTGTCACA
ATTATTGGACCCATTACAGCTACAGTTGAGGATGCCATACTTGTGTATGCAGCAATCTCG
GGATCCTCTCCAGCTGATCGAATTCGTCTGAATCCTTCCATCCCTTGTTTACCAGATTTA
TCTTCCAGTGAGGGTTCAAATATCTTGGGATCACTTACCTTGGGAAAGTATACAAAGTGG
TTTAACGATGTTAGCTCGACCGACATATCTGATAAGTGTGAAGATGTCCTAAACCAACTA
TTTCGTCTGTATGGGTGCAAAACAACAGAGATTGTCATACCGGAGCTTCGTGAGCTGCGC
ACAGCCCATACTGTTACTTTTGGATCTGAATCACTGTGCTTACTGAATCCTGATTGCGAG
GCTGGGAAAGGAGTTAGATTGACTAATGATACTCGCACAAATCTGGCACTTTTCAGATCA
TTTGCAGCATCTGACTATATATCTGCCCAGTGCCTTAGGCGAAGGATAATGTACTACCAC
ATGGAGATTTTCAAGAAAGTAGATGTCATTGTAACACCTACCACTGGAATGACGGCCCCA
GAAATTCCAGAAAGTGCTCTTGCAGTTGGAGAGACAAATTTGCAAGTTGTAGCAAGCCTA
ATGCAATTTGCTATGACAGCAAATGTTCTTGGACTTCCGGCAATTTCTGTCCCTATTGGT
CATGATAAGCAAGGACTTCCAATAGGCTTGCAACTTATTGGTCGTCCGTGGTGTGAAGCT
TCAATCTTGCGTTTAGCTGCTGCAATAGAGGAAATCTCTGCAGAGTATAGGAAGAAGCCA
GTGGAGTTCTATGACATCTTCAAAGGGAAGTCTAATTTTAACAGTTTCCATGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005631
PEP Infomation

pacid=37435411 transcript=PGSC0003DMT400008093 locus=PGSC0003DMG400003120 ID=PGSC0003DMT400008093.v4.03 annot-version=v4.03
Sequence

MGKKQIMLPANEVDLTAVKYVPEKIEAPHLTGLWFKLFVKVMEAPVIGSLIASHLKEKNG
ITEILKNTVIPEVPMFIPQFPLQEPEPGVVCLEEDGKPEERVALALKCLPHYDPTCRWSS
DSGEPFQFRYWKIRDYGYAYRSKLTTPSMVAEHFISAMEVFNSKQQSAPLLISFDPEEVR
RQAAASTQRFEEGNPLSILDGIFTAVKDDIDCYPHPSKGGSKWFHEVRQVKADGVSVSRL
RNSGAILVGKTNMHEFGMGTTGNNPNYGTPGNPHNPKRYTGGSSSGSAAIVASGLCSAAL
GTDGGGSVRIPASLCGVVGLKTTFGRTDLTGSLWEAGTVTIIGPITATVEDAILVYAAIS
GSSPADRIRLNPSIPCLPDLSSSEGSNILGSLTLGKYTKWFNDVSSTDISDKCEDVLNQL
FRLYGCKTTEIVIPELRELRTAHTVTFGSESLCLLNPDCEAGKGVRLTNDTRTNLALFRS
FAASDYISAQCLRRRIMYYHMEIFKKVDVIVTPTTGMTAPEIPESALAVGETNLQVVASL
MQFAMTANVLGLPAISVPIGHDKQGLPIGLQLIGRPWCEASILRLAAAIEEISAEYRKKP
VEFYDIFKGKSNFNSFHD*

Transcript Sequence

Transcript ID

PGSC0003DMT400008093
Transcript Infomation

pacid=37435411 locus=PGSC0003DMG400003120 ID=PGSC0003DMT400008093.v4.03 annot-version=v4.03
Sequence

ATGGGGAAAAAGCAAATAATGTTGCCGGCGAATGAAGTAGACCTTACTGCAGTCAAATAT
GTGCCCGAAAAAATTGAAGCTCCACATTTGACGGGGCTTTGGTTCAAGTTGTTTGTTAAA
GTAATGGAGGCACCTGTAATTGGTTCTTTAATTGCTAGTCATCTGAAGGAGAAGAATGGG
ATTACTGAGATTCTGAAGAATACTGTGATACCAGAGGTTCCCATGTTCATTCCCCAATTT
CCTCTTCAAGAGCCAGAGCCTGGTGTTGTTTGCTTAGAAGAAGATGGAAAACCTGAAGAA
CGGGTTGCTTTAGCATTGAAGTGTCTTCCACATTATGATCCTACTTGCAGATGGAGTTCT
GATTCAGGAGAACCATTCCAATTCCGCTATTGGAAAATTCGTGATTATGGATATGCTTAC
AGATCTAAGCTTACGACCCCATCTATGGTTGCAGAACACTTTATCTCAGCAATGGAGGTA
TTTAATAGTAAGCAGCAATCAGCACCACTATTAATCTCATTTGACCCCGAGGAAGTGAGA
AGGCAAGCGGCAGCTTCCACTCAAAGATTTGAGGAAGGAAACCCGTTGTCAATCTTGGAT
GGGATTTTCACTGCAGTCAAGGATGACATTGATTGCTATCCTCATCCTTCAAAGGGTGGT
TCTAAATGGTTTCATGAGGTTCGCCAGGTAAAGGCAGATGGGGTTTCTGTGTCAAGATTA
CGAAACAGTGGTGCAATTTTAGTAGGAAAGACAAATATGCATGAGTTTGGTATGGGCACA
ACAGGAAATAATCCAAATTACGGTACACCTGGAAATCCGCATAATCCAAAAAGGTACACA
GGTGGTTCTTCCTCAGGTTCAGCTGCAATTGTTGCTTCTGGATTGTGCTCAGCAGCATTG
GGAACAGATGGTGGAGGTTCAGTACGAATTCCTGCTTCTCTTTGCGGGGTTGTGGGCTTG
AAAACAACATTTGGACGGACTGACCTGACAGGGTCACTGTGGGAAGCAGGAACTGTCACA
ATTATTGGACCCATTACAGCTACAGTTGAGGATGCCATACTTGTGTATGCAGCAATCTCG
GGATCCTCTCCAGCTGATCGAATTCGTCTGAATCCTTCCATCCCTTGTTTACCAGATTTA
TCTTCCAGTGAGGGTTCAAATATCTTGGGATCACTTACCTTGGGAAAGTATACAAAGTGG
TTTAACGATGTTAGCTCGACCGACATATCTGATAAGTGTGAAGATGTCCTAAACCAACTA
TTTCGTCTGTATGGGTGCAAAACAACAGAGATTGTCATACCGGAGCTTCGTGAGCTGCGC
ACAGCCCATACTGTTACTTTTGGATCTGAATCACTGTGCTTACTGAATCCTGATTGCGAG
GCTGGGAAAGGAGTTAGATTGACTAATGATACTCGCACAAATCTGGCACTTTTCAGATCA
TTTGCAGCATCTGACTATATATCTGCCCAGTGCCTTAGGCGAAGGATAATGTACTACCAC
ATGGAGATTTTCAAGAAAGTAGATGTCATTGTAACACCTACCACTGGAATGACGGCCCCA
GAAATTCCAGAAAGTGCTCTTGCAGTTGGAGAGACAAATTTGCAAGTTGTAGCAAGCCTA
ATGCAATTTGCTATGACAGCAAATGTTCTTGGACTTCCGGCAATTTCTGTCCCTATTGGT
CATGATAAGCAAGGACTTCCAATAGGCTTGCAACTTATTGGTCGTCCGTGGTGTGAAGCT
TCAATCTTGCGTTTAGCTGCTGCAATAGAGGAAATCTCTGCAGAGTATAGGAAGAAGCCA
GTGGAGTTCTATGACATCTTCAAAGGGAAGTCTAATTTTAACAGTTTCCATGACTGA