Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008070
CDS Infomation

pacid=37440810 polypeptide=PGSC0003DMP400005611 locus=PGSC0003DMG400003113 ID=PGSC0003DMT400008070.v4.03 annot-version=v4.03
Sequence

ATGGCTTCATCAGAGATCGAGATCGTTTCCGACTCCAATGATCAGCAAACTTCTGGTTTT
CGAAACCCTAACGAACCAGCCATACTCGATGTTTACTCTGCTTGCGCTTACGGTGATTTT
GACAAACTCCGGAAATTCGTTGAAGTTGACGGCGTTTCCGTTTACCAGCCGGACGGCAAC
GGATATTACGCGATTCAATGGGCTGCTCTCAACAATTTCGCTGATATTGTCCAATATATC
ATCGAGCACGGGGGAAATGTCCATGCGACGGACAATTCGGGACAGACTGCGTTGCATTGG
GCAGCAGTGCGGGGATCTAGTGCAGCTGCCGATGTGCTGTTGCAGAATGGTGCACGGGTC
GAGGCTGCTGACGTTAATGGCTATCGGGCAATTCATGTTGCAGCTCAGTATGGACAAACA
GCTTTTGTAAATCACATTGTTGCGAAGTATCATGCTGACCTTAATGTACCAGATAATGAT
GGGAGGAGCCCTCTTCACTGGGCTGCATACAAGGGATTTGGTGATACAATTAGGTTACTT
CTATTCAGAGATGCTTTCCAAGGGAGACAAGATAAAGATGGTTGCACTCCTTTGCATTGG
GCAGCATTAAGAGGAAATGCAGAGGCTTGCACTTTACTTGTACATGCAGGCACAAAGGAG
GAATTAACAGTCAAAGATAATGCAGGACTTACTCCTGCAGAACTTGCATCTGATAAAGGT
CATCTGCAAATAGCACTTATACTTTCTAATGCCCAACGGTCACAGAGAAAGCAGTGGAAA
GACAAGATTTTCCCTGCTAAAATGGGGCATAAAGGTTATGCTCCAATTCTATTCTCCGTT
GTTGTTGTCAACGTCATTCTCTTCATCAGTTCAGTCCTCTTTGCTCCTGGTCTTACAAAA
GTTACTGCTGTTGTCGCACTTTGGGGATGGACTGCTGTTTCCCTGGCAGTTGCCGCACTC
CTAGTGTTAGTTCGTTGCAGTAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005611
PEP Infomation

pacid=37440810 transcript=PGSC0003DMT400008070 locus=PGSC0003DMG400003113 ID=PGSC0003DMT400008070.v4.03 annot-version=v4.03
Sequence

MASSEIEIVSDSNDQQTSGFRNPNEPAILDVYSACAYGDFDKLRKFVEVDGVSVYQPDGN
GYYAIQWAALNNFADIVQYIIEHGGNVHATDNSGQTALHWAAVRGSSAAADVLLQNGARV
EAADVNGYRAIHVAAQYGQTAFVNHIVAKYHADLNVPDNDGRSPLHWAAYKGFGDTIRLL
LFRDAFQGRQDKDGCTPLHWAALRGNAEACTLLVHAGTKEELTVKDNAGLTPAELASDKG
HLQIALILSNAQRSQRKQWKDKIFPAKMGHKGYAPILFSVVVVNVILFISSVLFAPGLTK
VTAVVALWGWTAVSLAVAALLVLVRCSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400008070
Transcript Infomation

pacid=37440810 locus=PGSC0003DMG400003113 ID=PGSC0003DMT400008070.v4.03 annot-version=v4.03
Sequence

ATGGCTTCATCAGAGATCGAGATCGTTTCCGACTCCAATGATCAGCAAACTTCTGGTTTT
CGAAACCCTAACGAACCAGCCATACTCGATGTTTACTCTGCTTGCGCTTACGGTGATTTT
GACAAACTCCGGAAATTCGTTGAAGTTGACGGCGTTTCCGTTTACCAGCCGGACGGCAAC
GGATATTACGCGATTCAATGGGCTGCTCTCAACAATTTCGCTGATATTGTCCAATATATC
ATCGAGCACGGGGGAAATGTCCATGCGACGGACAATTCGGGACAGACTGCGTTGCATTGG
GCAGCAGTGCGGGGATCTAGTGCAGCTGCCGATGTGCTGTTGCAGAATGGTGCACGGGTC
GAGGCTGCTGACGTTAATGGCTATCGGGCAATTCATGTTGCAGCTCAGTATGGACAAACA
GCTTTTGTAAATCACATTGTTGCGAAGTATCATGCTGACCTTAATGTACCAGATAATGAT
GGGAGGAGCCCTCTTCACTGGGCTGCATACAAGGGATTTGGTGATACAATTAGGTTACTT
CTATTCAGAGATGCTTTCCAAGGGAGACAAGATAAAGATGGTTGCACTCCTTTGCATTGG
GCAGCATTAAGAGGAAATGCAGAGGCTTGCACTTTACTTGTACATGCAGGCACAAAGGAG
GAATTAACAGTCAAAGATAATGCAGGACTTACTCCTGCAGAACTTGCATCTGATAAAGGT
CATCTGCAAATAGCACTTATACTTTCTAATGCCCAACGGTCACAGAGAAAGCAGTGGAAA
GACAAGATTTTCCCTGCTAAAATGGGGCATAAAGGTTATGCTCCAATTCTATTCTCCGTT
GTTGTTGTCAACGTCATTCTCTTCATCAGTTCAGTCCTCTTTGCTCCTGGTCTTACAAAA
GTTACTGCTGTTGTCGCACTTTGGGGATGGACTGCTGTTTCCCTGGCAGTTGCCGCACTC
CTAGTGTTAGTTCGTTGCAGTAGGTAA