Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008041
CDS Infomation

pacid=37435163 polypeptide=PGSC0003DMP400005590 locus=PGSC0003DMG400003108 ID=PGSC0003DMT400008041.v4.03 annot-version=v4.03
Sequence

ATGGCATCCGCCGTCTTAGCTAGCCGGAATGAATCTAGCTGGGCTCAGTCTGGTGGTGCC
GGTGGTGGATTCATGGGGAAAACCCCTTTTTCTCATACACAACTGAACCCTAATCACAAC
CCTAACCCTAAGAAGAAGCAGAAGCAATTCCATCACACCTCTAATGGTCGGCATATTGAT
GAATCGCCGGCCGTGACGCAAACAGCGTCTGATGATGCCTATTCGTTCAATCAACGGCCG
ATTGAATCAACGACCAACGTTGACGGCCTTAATTTCGGAGGATATTTGACTTTTAACGTC
GTCTCTTACAACAAAGGCGAGGTCAATGAGCTACGGAGTCGGCTGTTGGCGGAGGTCGAA
CAGATCCGAAACCTCAAGGATCGAATCGAATCCGGTCAATTGAGCACCACCAACCCCAGA
TCACAAGGCAAATCGAAGAAACTATCTGGAAATAAACGGCCTACCCCTTCCGGATCCAGT
AAAGATCCGAAAAAGCTCCCAAACGGAGTTGAAAATAGGAATTTTGGTAATCCTGTTGGT
GGTGGTGGTGTTAAGGCCATCGGAACGGAAAGTATGATGAAGGAATGTAGGCAGATTTTG
GCAAAGCTGATGAAGCATAAAAATGGGTGGATTTTCAATATCCCTGTTGATGCTGAAGCC
CTGGGTCTTCATGATTACCACCAAATTATTAAGCGACCCATGGATTTGGGGACGGTTAAA
TCAAATTTGGCTAAGAATTTTTACCCTTCCCCTTTTGAATTTGCTGCTGATGTAAGGCTT
ACTTTCAATAATGCCTTGTTGTATAACCCTAAAACAGATCAAGTTAATGGCTTCGCTGAG
CAGCTTCTCGGACGATTTGAGGACATGTTTAGACCGCTCCAGGATAAAATGAATAAGCTT
GAAGGCGGCAGGAGGGATTATCATCCTGTAGATGAGTTGCAGGGGAGTTCTTGGAATCAC
ATACCTACGCCCGAGAGAGTGAAGAAACCCAAGGCTACTCCAGTCCCTCACATTTCAAAG
AGGCAAGAGCGGATGCAAAATCATTCTAGTGCGTCAACACCCTCTTTGCCAGTGCCACCA
CCCAATCCACCAGCCCGGCAGCAGTCCCCATTGTCAACTCCTTCCCCAGTGAGGGCACCA
CCCTCGAAGCCTGAATCAGCTGCTAAAGTTCCTGCTATGGGAAAGCAACCTAAACCGAGG
GCCAAGGATCCAAATAAAAGAGAGATGAATATGGAGGAGAAGCATAAATTAGGAGTTGGG
TTGCAAAGTTTGCCACAAGAGAAGATGCCGCAGTTGGTGCAGATTATAAGGAAGAGGAAT
GAACATTTAGCCCAAGACGGTGACGAGATTGAGCTCGACATTGAGGCCCTTGACACCGAG
ACTCTATGGGAGCTTGATCGGTTTGTGACCAATTGGAAGAAGATGGTGAGCAAAACTAAG
AGGCAGGCATTGATGATTAACAATTTGGGACCACCATCCGCCAGTGCTGCAGCTTCTGCT
GCAACTACATCCGTCGCCGAAGCAGATGGGCCTACCACTAGTGAGAAAAATGATTCCTTC
AAAAAGCCCAAAAAGGGTGATGTTGGAGAAGAGGATGTAGAGATAGAGGATGATGAACCA
GCTACCCATTTTCCTCCAGTGGAAATTGAGAAGGATGAAGGTGGTGGGCGGGATCAAGAG
AATGGTGGTGGTGGTAGTAGTAGCTCTAGTAGTTCTAGCAGCTCAAGCAGTGGCTCCTCC
TCTTCTAGTGATTCTGATTCAGGAAGTTCATCCGGAAGTGACTCTGATGCTGATGATGCA
CACTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005590
PEP Infomation

pacid=37435163 transcript=PGSC0003DMT400008041 locus=PGSC0003DMG400003108 ID=PGSC0003DMT400008041.v4.03 annot-version=v4.03
Sequence

MASAVLASRNESSWAQSGGAGGGFMGKTPFSHTQLNPNHNPNPKKKQKQFHHTSNGRHID
ESPAVTQTASDDAYSFNQRPIESTTNVDGLNFGGYLTFNVVSYNKGEVNELRSRLLAEVE
QIRNLKDRIESGQLSTTNPRSQGKSKKLSGNKRPTPSGSSKDPKKLPNGVENRNFGNPVG
GGGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPMDLGTVK
SNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNGFAEQLLGRFEDMFRPLQDKMNKL
EGGRRDYHPVDELQGSSWNHIPTPERVKKPKATPVPHISKRQERMQNHSSASTPSLPVPP
PNPPARQQSPLSTPSPVRAPPSKPESAAKVPAMGKQPKPRAKDPNKREMNMEEKHKLGVG
LQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTK
RQALMINNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKKPKKGDVGEEDVEIEDDEP
ATHFPPVEIEKDEGGGRDQENGGGGSSSSSSSSSSSSGSSSSSDSDSGSSSGSDSDADDA
HS*

Transcript Sequence

Transcript ID

PGSC0003DMT400008041
Transcript Infomation

pacid=37435163 locus=PGSC0003DMG400003108 ID=PGSC0003DMT400008041.v4.03 annot-version=v4.03
Sequence

ATGGCATCCGCCGTCTTAGCTAGCCGGAATGAATCTAGCTGGGCTCAGTCTGGTGGTGCC
GGTGGTGGATTCATGGGGAAAACCCCTTTTTCTCATACACAACTGAACCCTAATCACAAC
CCTAACCCTAAGAAGAAGCAGAAGCAATTCCATCACACCTCTAATGGTCGGCATATTGAT
GAATCGCCGGCCGTGACGCAAACAGCGTCTGATGATGCCTATTCGTTCAATCAACGGCCG
ATTGAATCAACGACCAACGTTGACGGCCTTAATTTCGGAGGATATTTGACTTTTAACGTC
GTCTCTTACAACAAAGGCGAGGTCAATGAGCTACGGAGTCGGCTGTTGGCGGAGGTCGAA
CAGATCCGAAACCTCAAGGATCGAATCGAATCCGGTCAATTGAGCACCACCAACCCCAGA
TCACAAGGCAAATCGAAGAAACTATCTGGAAATAAACGGCCTACCCCTTCCGGATCCAGT
AAAGATCCGAAAAAGCTCCCAAACGGAGTTGAAAATAGGAATTTTGGTAATCCTGTTGGT
GGTGGTGGTGTTAAGGCCATCGGAACGGAAAGTATGATGAAGGAATGTAGGCAGATTTTG
GCAAAGCTGATGAAGCATAAAAATGGGTGGATTTTCAATATCCCTGTTGATGCTGAAGCC
CTGGGTCTTCATGATTACCACCAAATTATTAAGCGACCCATGGATTTGGGGACGGTTAAA
TCAAATTTGGCTAAGAATTTTTACCCTTCCCCTTTTGAATTTGCTGCTGATGTAAGGCTT
ACTTTCAATAATGCCTTGTTGTATAACCCTAAAACAGATCAAGTTAATGGCTTCGCTGAG
CAGCTTCTCGGACGATTTGAGGACATGTTTAGACCGCTCCAGGATAAAATGAATAAGCTT
GAAGGCGGCAGGAGGGATTATCATCCTGTAGATGAGTTGCAGGGGAGTTCTTGGAATCAC
ATACCTACGCCCGAGAGAGTGAAGAAACCCAAGGCTACTCCAGTCCCTCACATTTCAAAG
AGGCAAGAGCGGATGCAAAATCATTCTAGTGCGTCAACACCCTCTTTGCCAGTGCCACCA
CCCAATCCACCAGCCCGGCAGCAGTCCCCATTGTCAACTCCTTCCCCAGTGAGGGCACCA
CCCTCGAAGCCTGAATCAGCTGCTAAAGTTCCTGCTATGGGAAAGCAACCTAAACCGAGG
GCCAAGGATCCAAATAAAAGAGAGATGAATATGGAGGAGAAGCATAAATTAGGAGTTGGG
TTGCAAAGTTTGCCACAAGAGAAGATGCCGCAGTTGGTGCAGATTATAAGGAAGAGGAAT
GAACATTTAGCCCAAGACGGTGACGAGATTGAGCTCGACATTGAGGCCCTTGACACCGAG
ACTCTATGGGAGCTTGATCGGTTTGTGACCAATTGGAAGAAGATGGTGAGCAAAACTAAG
AGGCAGGCATTGATGATTAACAATTTGGGACCACCATCCGCCAGTGCTGCAGCTTCTGCT
GCAACTACATCCGTCGCCGAAGCAGATGGGCCTACCACTAGTGAGAAAAATGATTCCTTC
AAAAAGCCCAAAAAGGGTGATGTTGGAGAAGAGGATGTAGAGATAGAGGATGATGAACCA
GCTACCCATTTTCCTCCAGTGGAAATTGAGAAGGATGAAGGTGGTGGGCGGGATCAAGAG
AATGGTGGTGGTGGTAGTAGTAGCTCTAGTAGTTCTAGCAGCTCAAGCAGTGGCTCCTCC
TCTTCTAGTGATTCTGATTCAGGAAGTTCATCCGGAAGTGACTCTGATGCTGATGATGCA
CACTCTTGA