Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008035
CDS Infomation

pacid=37435044 polypeptide=PGSC0003DMP400005585 locus=PGSC0003DMG400003105 ID=PGSC0003DMT400008035.v4.03 annot-version=v4.03
Sequence

ATGGTTATTGGACTTAACATTCACACAGCACCAGTTGAAGTGCGGGAGAAAGTTTCTATC
CCAGAAGCACAATGGCCTCAAGCAATTCGCGAACTGTGTTCCTTGAATCATATAGAGGAA
GCTGCTGTATTGAGTACTTGTAACAGAATTGAAATATATGTTTTGGCGCTTGCCCAAAAT
CGTGGAATTAAAGAAGTGACTGAGTGGATGTCTAAGTTTAGTGGAGTTCCAGTTACAGAG
CTATGCCAACACCGGTTTTTGCTATACAATCAAGATGCCACACAACACCTGTTTGAAGTA
GCTGCTGGACTAGATTCCCTAGTCCTGGGAGAAGGTCAAATTCTTGCACAGGTCAAGCAG
GTTGTTAAGAATGGGCAGGGGGTCCCTGGCTTTGGTAGGAAAATAAGTGAGCTATTTAAG
CGTGCAATCACAACTGGTAAGAGGGTAAGAACTGAGACCAATATCTCCAGCGGATCAGTA
TCAGTCAGTTCAGCGGCGGTGGAGCTTGCTCTGCTGAAACTTCCAGAGTATTCTTCTTCT
ACGGCTCGTGTGTTAATTGTTGGAGCTGGCAAGATGGGAAAGCTTGTGATCAGACATTTG
GTTGCTAAAGGGTGTAAAAAGATGGTTGTCGTTAACAGGACAGCGGACAGAGTTGCTGCC
ATCCGTGAGGAGTTGATGGATGCTGATATAGTATACAAGCCTTTCTCAGAATTATTAGCA
TGTGCTGCTCAGTCTGATGTAATATTCACCTGCACTGCTTCGAAAGCTCCTTTATTCATA
AAGGAGAGTGTTCAAGCTCTCCCTTCTGTGAACTCTGAAGATGGGTGCCGGAGGCTATTT
ATTGATATTTCTGTTCCTCGGAATGTGGAACCTAGTGTCGCAGAACTTGAAGGTGCAGGT
GTTTACAATGTGGATGATCTTAAAGAGGTTGTGGAAGCTAATAAGGAGGATCGGTTGCGG
AAGAAAATGGAAGCTGAGACCATCATTGCTGAGGAAGTGAAACAATTTGAAGCACTTAAA
GACTCCCTTGAGACCGTTCCAACTATAAAAAAGCTCAGGGCATATGCTGAAAGAATTAGG
TCTGCTGAGGTTGACAAATGTTTGTCTAAGATGGGTGATGATATCCCCCAAAACAAGAAG
AAGGCTATCTATGATCTCAGTCTAGGGATAGTAAACAAGCTGCTACACGGACCAATGCAG
CATCTAAAATGTGATGGAGCTGAAAACCGAACTTTGAGTGAAATACTTGAAAATATGCAC
GCTCTTAACAGAATATTTGGTCTTGATACTGAGATGTCTGTATTGGAAGAGAAAGTACGA
GCCAAGATAGAACAAAATCAAAAGCAATCCTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005585
PEP Infomation

pacid=37435044 transcript=PGSC0003DMT400008035 locus=PGSC0003DMG400003105 ID=PGSC0003DMT400008035.v4.03 annot-version=v4.03
Sequence

MVIGLNIHTAPVEVREKVSIPEAQWPQAIRELCSLNHIEEAAVLSTCNRIEIYVLALAQN
RGIKEVTEWMSKFSGVPVTELCQHRFLLYNQDATQHLFEVAAGLDSLVLGEGQILAQVKQ
VVKNGQGVPGFGRKISELFKRAITTGKRVRTETNISSGSVSVSSAAVELALLKLPEYSSS
TARVLIVGAGKMGKLVIRHLVAKGCKKMVVVNRTADRVAAIREELMDADIVYKPFSELLA
CAAQSDVIFTCTASKAPLFIKESVQALPSVNSEDGCRRLFIDISVPRNVEPSVAELEGAG
VYNVDDLKEVVEANKEDRLRKKMEAETIIAEEVKQFEALKDSLETVPTIKKLRAYAERIR
SAEVDKCLSKMGDDIPQNKKKAIYDLSLGIVNKLLHGPMQHLKCDGAENRTLSEILENMH
ALNRIFGLDTEMSVLEEKVRAKIEQNQKQSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400008035
Transcript Infomation

pacid=37435044 locus=PGSC0003DMG400003105 ID=PGSC0003DMT400008035.v4.03 annot-version=v4.03
Sequence

ATGGTTATTGGACTTAACATTCACACAGCACCAGTTGAAGTGCGGGAGAAAGTTTCTATC
CCAGAAGCACAATGGCCTCAAGCAATTCGCGAACTGTGTTCCTTGAATCATATAGAGGAA
GCTGCTGTATTGAGTACTTGTAACAGAATTGAAATATATGTTTTGGCGCTTGCCCAAAAT
CGTGGAATTAAAGAAGTGACTGAGTGGATGTCTAAGTTTAGTGGAGTTCCAGTTACAGAG
CTATGCCAACACCGGTTTTTGCTATACAATCAAGATGCCACACAACACCTGTTTGAAGTA
GCTGCTGGACTAGATTCCCTAGTCCTGGGAGAAGGTCAAATTCTTGCACAGGTCAAGCAG
GTTGTTAAGAATGGGCAGGGGGTCCCTGGCTTTGGTAGGAAAATAAGTGAGCTATTTAAG
CGTGCAATCACAACTGGTAAGAGGGTAAGAACTGAGACCAATATCTCCAGCGGATCAGTA
TCAGTCAGTTCAGCGGCGGTGGAGCTTGCTCTGCTGAAACTTCCAGAGTATTCTTCTTCT
ACGGCTCGTGTGTTAATTGTTGGAGCTGGCAAGATGGGAAAGCTTGTGATCAGACATTTG
GTTGCTAAAGGGTGTAAAAAGATGGTTGTCGTTAACAGGACAGCGGACAGAGTTGCTGCC
ATCCGTGAGGAGTTGATGGATGCTGATATAGTATACAAGCCTTTCTCAGAATTATTAGCA
TGTGCTGCTCAGTCTGATGTAATATTCACCTGCACTGCTTCGAAAGCTCCTTTATTCATA
AAGGAGAGTGTTCAAGCTCTCCCTTCTGTGAACTCTGAAGATGGGTGCCGGAGGCTATTT
ATTGATATTTCTGTTCCTCGGAATGTGGAACCTAGTGTCGCAGAACTTGAAGGTGCAGGT
GTTTACAATGTGGATGATCTTAAAGAGGTTGTGGAAGCTAATAAGGAGGATCGGTTGCGG
AAGAAAATGGAAGCTGAGACCATCATTGCTGAGGAAGTGAAACAATTTGAAGCACTTAAA
GACTCCCTTGAGACCGTTCCAACTATAAAAAAGCTCAGGGCATATGCTGAAAGAATTAGG
TCTGCTGAGGTTGACAAATGTTTGTCTAAGATGGGTGATGATATCCCCCAAAACAAGAAG
AAGGCTATCTATGATCTCAGTCTAGGGATAGTAAACAAGCTGCTACACGGACCAATGCAG
CATCTAAAATGTGATGGAGCTGAAAACCGAACTTTGAGTGAAATACTTGAAAATATGCAC
GCTCTTAACAGAATATTTGGTCTTGATACTGAGATGTCTGTATTGGAAGAGAAAGTACGA
GCCAAGATAGAACAAAATCAAAAGCAATCCTCTTGA