Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007983
CDS Infomation

pacid=37425360 polypeptide=PGSC0003DMP400005549 locus=PGSC0003DMG400003086 ID=PGSC0003DMT400007983.v4.03 annot-version=v4.03
Sequence

ATGCCAATTATAAATGTATCTAAAGAAAAGGGAAGAACACCATGGGAGATTCGTCCAGGA
TCTAATTCCGTCCTTATCACTAATGACGCTTCTCTTTTCACAAGCTCAGTGCCTGTTCTT
CAACATGAGAAGCTGAAAGTAAGTGACGGCGACCATGGCCATCAATCTGTTGATGATGCA
TCACCAAGCTTGAAGATAATTCACCCGGATGTAGAGGTTGATGTGCTGCTGGATGATGGT
GAAAATCGTGCAATTGGAAGCTTGCTTCCTGATGACGAGGATGAACTTTTAGCTGGGATA
ATGGATGGGTTTGACCCTAGTCAGTTTCCCAACCACACAGATGACTTGGAAGAGTATGAT
ATTTTTGGAAGTGGAGGAGGCTTAGAGTTGGAGTTTGATGGTCAGGAACACTTAAACCTG
GGTATATCGAGAGTAAGTCTGGCTGATCCAGATAGCAATGGAGCTGCTATTTATGGACTT
TCAAATGGTGGGGGTGCGGTTACCGGAGAACATCCACTTGGAGAGCACCCTTCAAGAACA
TTATTTGTTCGCAACATAAATAGCAATGTTGAGGATTCTGAGCTAAGAACTCTCTTTGAG
CAATATGGTGATATCCGAACTCTCTATACTGCCTGTAAGCATAGGGGCTTTGTCATGATA
TCATACTTCGATATTCGTGCTGCTCGAACTGCAATGCGAGCATTGCAAAATAAGCCACTG
CGAAGGAGAAAACTAGACATACATTTCTCAATCCCTAAGGACAACCCCTCTGACAAAGAT
GTAAATCAAGGAACTCTTGTGGTTTTTAATCTAGATCCATCTGTATCAAATGATGACCTC
CGCAAAGTATTTGGGCCTTATGGTGAGATCAAAGAGATAAGGGAAACACCACACAAGAGG
CACCATAAGTTTATCGAATATTACGATGTCAGAGCTGCAGAAGCTGCCCTTAGGTCCTTA
AATAAGAGTGCCATAGCTGGCAAGCGGATAAAGCTTGAACCAAGCCGCCCTGGAGGAGCT
AGACGAAATCTTGTATTGCAATCATCTCAAGAACCTGAACAAGATGATTCTTGGACTTTT
CGGCATCCATTGGGTTCCTCAATTGGTAATTCCTCCCCGGGTAATTGGCCACAATTTGGC
AGCCCTATAGAGCATGGCTCCACGCAAAGTCCTGGCACTTCACCAGGCTTTAGATCCCTG
AGTCCCACCATTGCCAATAATCTACATGGGTTAGCTTCAATTTTGCATTCTCGTGCATCA
AATACCTTGACGGTAGCACCTATTGGTAATGCTCGCACAATGAGCGGTCATGCAGATTTC
CCTATTGGTTCAAACCATGGTGTTCCCTTCGCTCAGTCTAATTCTTTCCCTGAGCCTAAA
ATAAGCCAGTTTGGTGGAACAGTGTCCTCTTTTGGTGCTTCAAGTACAAATGGTTCTGCT
GTTGAAACACTCTCAGGACCACAGTTTCTCTGGGGCAGTCCAAAGTTGCAGTCTCAACAG
AGTAATTCTTCAGCCCGGAAAACTGAGTCTTTGGGGAATGCTTTTTCATTTGGTGGTCAG
GGCGATAGGTTTTCCTTGTCAAATCATCAAAAATCTTTCCTCAATTCATCTCAGCACCAT
CATCACCACCTTCATCATGTTGGATCTGCTCCATCTGGTCTTCCCCTTGATAGGCACTTT
GGTTTTTACCCAGACTCATCAATCTTGAGCCCAGGTTTTAGGGGCATGGGTATAGGTCCT
CGTGATGGAAGTTTGATGGTTAACTATGGTTCTCGTACTACTTTGAATGCTGGTGTTGCT
GTTCCAAGGAATATGTCGGACAATGCTTCTCCTAGATTTGGCATGATGTCTTCCCAAAAA
CTTGGTCCATTGTTCCTTGGTAATGGTCATTTCCCAGGACATGCAGCTACTAGCTTTGAG
GGGCTGACTGAACGCAGTCGCACTCGACGTGTTGACAATAATAATGGGAACCAGATGGAC
AACAAGAAGCTGTTTCAACTTGATTTGGATAAGATTAGATGTGGTGAAGATACTCGGACT
ACTTTGATGATTAAAAATATTCCTAACAAGTACACCTCCAAGATGCTTTTAGCTGCTATT
GACGAACAACATAAAGGCACTTTTGATTTTCTGTATCTGCCCATCGATTTCAAGAACAAA
TGCAATGTGGGATATGCCTTTATCAACATGTTGTCTCCATCACTCATTATCCCATTTTAT
GAGGCATTTAATGGAAAGAAGTGGGAGAAATTCAATAGTGAGAAAGTTGCTGCTTTGGCT
TATGCTCGGATTCAGGGAAAGACGGCCCTTGTTGCCCACTTCCAGAATTCAAGTTTGATG
AATGAAGATAAGCGATGTAGGCCAATCCTTTTCCACTCAGAAAGTTCAGAATTGGGGGAT
CAGATTGTTCAGGAACATCTTTCATCAGGCTGCTTACATATTCAAGTCTGCCAGTCAAAC
GAGTCAGACATCCTGGGGTCACAAGGCAGCCCACCTGAGGATCCAGTTGACGAATTGGAG
AATAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400005549
PEP Infomation

pacid=37425360 transcript=PGSC0003DMT400007983 locus=PGSC0003DMG400003086 ID=PGSC0003DMT400007983.v4.03 annot-version=v4.03
Sequence

MPIINVSKEKGRTPWEIRPGSNSVLITNDASLFTSSVPVLQHEKLKVSDGDHGHQSVDDA
SPSLKIIHPDVEVDVLLDDGENRAIGSLLPDDEDELLAGIMDGFDPSQFPNHTDDLEEYD
IFGSGGGLELEFDGQEHLNLGISRVSLADPDSNGAAIYGLSNGGGAVTGEHPLGEHPSRT
LFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRGFVMISYFDIRAARTAMRALQNKPL
RRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNDDLRKVFGPYGEIKEIRETPHKR
HHKFIEYYDVRAAEAALRSLNKSAIAGKRIKLEPSRPGGARRNLVLQSSQEPEQDDSWTF
RHPLGSSIGNSSPGNWPQFGSPIEHGSTQSPGTSPGFRSLSPTIANNLHGLASILHSRAS
NTLTVAPIGNARTMSGHADFPIGSNHGVPFAQSNSFPEPKISQFGGTVSSFGASSTNGSA
VETLSGPQFLWGSPKLQSQQSNSSARKTESLGNAFSFGGQGDRFSLSNHQKSFLNSSQHH
HHHLHHVGSAPSGLPLDRHFGFYPDSSILSPGFRGMGIGPRDGSLMVNYGSRTTLNAGVA
VPRNMSDNASPRFGMMSSQKLGPLFLGNGHFPGHAATSFEGLTERSRTRRVDNNNGNQMD
NKKLFQLDLDKIRCGEDTRTTLMIKNIPNKYTSKMLLAAIDEQHKGTFDFLYLPIDFKNK
CNVGYAFINMLSPSLIIPFYEAFNGKKWEKFNSEKVAALAYARIQGKTALVAHFQNSSLM
NEDKRCRPILFHSESSELGDQIVQEHLSSGCLHIQVCQSNESDILGSQGSPPEDPVDELE
NS*

Transcript Sequence

Transcript ID

PGSC0003DMT400007983
Transcript Infomation

pacid=37425360 locus=PGSC0003DMG400003086 ID=PGSC0003DMT400007983.v4.03 annot-version=v4.03
Sequence

ATGCCAATTATAAATGTATCTAAAGAAAAGGGAAGAACACCATGGGAGATTCGTCCAGGA
TCTAATTCCGTCCTTATCACTAATGACGCTTCTCTTTTCACAAGCTCAGTGCCTGTTCTT
CAACATGAGAAGCTGAAAGTAAGTGACGGCGACCATGGCCATCAATCTGTTGATGATGCA
TCACCAAGCTTGAAGATAATTCACCCGGATGTAGAGGTTGATGTGCTGCTGGATGATGGT
GAAAATCGTGCAATTGGAAGCTTGCTTCCTGATGACGAGGATGAACTTTTAGCTGGGATA
ATGGATGGGTTTGACCCTAGTCAGTTTCCCAACCACACAGATGACTTGGAAGAGTATGAT
ATTTTTGGAAGTGGAGGAGGCTTAGAGTTGGAGTTTGATGGTCAGGAACACTTAAACCTG
GGTATATCGAGAGTAAGTCTGGCTGATCCAGATAGCAATGGAGCTGCTATTTATGGACTT
TCAAATGGTGGGGGTGCGGTTACCGGAGAACATCCACTTGGAGAGCACCCTTCAAGAACA
TTATTTGTTCGCAACATAAATAGCAATGTTGAGGATTCTGAGCTAAGAACTCTCTTTGAG
CAATATGGTGATATCCGAACTCTCTATACTGCCTGTAAGCATAGGGGCTTTGTCATGATA
TCATACTTCGATATTCGTGCTGCTCGAACTGCAATGCGAGCATTGCAAAATAAGCCACTG
CGAAGGAGAAAACTAGACATACATTTCTCAATCCCTAAGGACAACCCCTCTGACAAAGAT
GTAAATCAAGGAACTCTTGTGGTTTTTAATCTAGATCCATCTGTATCAAATGATGACCTC
CGCAAAGTATTTGGGCCTTATGGTGAGATCAAAGAGATAAGGGAAACACCACACAAGAGG
CACCATAAGTTTATCGAATATTACGATGTCAGAGCTGCAGAAGCTGCCCTTAGGTCCTTA
AATAAGAGTGCCATAGCTGGCAAGCGGATAAAGCTTGAACCAAGCCGCCCTGGAGGAGCT
AGACGAAATCTTGTATTGCAATCATCTCAAGAACCTGAACAAGATGATTCTTGGACTTTT
CGGCATCCATTGGGTTCCTCAATTGGTAATTCCTCCCCGGGTAATTGGCCACAATTTGGC
AGCCCTATAGAGCATGGCTCCACGCAAAGTCCTGGCACTTCACCAGGCTTTAGATCCCTG
AGTCCCACCATTGCCAATAATCTACATGGGTTAGCTTCAATTTTGCATTCTCGTGCATCA
AATACCTTGACGGTAGCACCTATTGGTAATGCTCGCACAATGAGCGGTCATGCAGATTTC
CCTATTGGTTCAAACCATGGTGTTCCCTTCGCTCAGTCTAATTCTTTCCCTGAGCCTAAA
ATAAGCCAGTTTGGTGGAACAGTGTCCTCTTTTGGTGCTTCAAGTACAAATGGTTCTGCT
GTTGAAACACTCTCAGGACCACAGTTTCTCTGGGGCAGTCCAAAGTTGCAGTCTCAACAG
AGTAATTCTTCAGCCCGGAAAACTGAGTCTTTGGGGAATGCTTTTTCATTTGGTGGTCAG
GGCGATAGGTTTTCCTTGTCAAATCATCAAAAATCTTTCCTCAATTCATCTCAGCACCAT
CATCACCACCTTCATCATGTTGGATCTGCTCCATCTGGTCTTCCCCTTGATAGGCACTTT
GGTTTTTACCCAGACTCATCAATCTTGAGCCCAGGTTTTAGGGGCATGGGTATAGGTCCT
CGTGATGGAAGTTTGATGGTTAACTATGGTTCTCGTACTACTTTGAATGCTGGTGTTGCT
GTTCCAAGGAATATGTCGGACAATGCTTCTCCTAGATTTGGCATGATGTCTTCCCAAAAA
CTTGGTCCATTGTTCCTTGGTAATGGTCATTTCCCAGGACATGCAGCTACTAGCTTTGAG
GGGCTGACTGAACGCAGTCGCACTCGACGTGTTGACAATAATAATGGGAACCAGATGGAC
AACAAGAAGCTGTTTCAACTTGATTTGGATAAGATTAGATGTGGTGAAGATACTCGGACT
ACTTTGATGATTAAAAATATTCCTAACAAGTACACCTCCAAGATGCTTTTAGCTGCTATT
GACGAACAACATAAAGGCACTTTTGATTTTCTGTATCTGCCCATCGATTTCAAGAACAAA
TGCAATGTGGGATATGCCTTTATCAACATGTTGTCTCCATCACTCATTATCCCATTTTAT
GAGGCATTTAATGGAAAGAAGTGGGAGAAATTCAATAGTGAGAAAGTTGCTGCTTTGGCT
TATGCTCGGATTCAGGGAAAGACGGCCCTTGTTGCCCACTTCCAGAATTCAAGTTTGATG
AATGAAGATAAGCGATGTAGGCCAATCCTTTTCCACTCAGAAAGTTCAGAATTGGGGGAT
CAGATTGTTCAGGAACATCTTTCATCAGGCTGCTTACATATTCAAGTCTGCCAGTCAAAC
GAGTCAGACATCCTGGGGTCACAAGGCAGCCCACCTGAGGATCCAGTTGACGAATTGGAG
AATAGCTAG