Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007972
CDS Infomation

pacid=37427577 polypeptide=PGSC0003DMP400005540 locus=PGSC0003DMG400003082 ID=PGSC0003DMT400007972.v4.03 annot-version=v4.03
Sequence

ATGAGTAGCAGAAACAATGGTGGAGTTGGGGTACAATCGATACCCGCAGGGTCAAGAAAG
ATGGTACAAAGCTTAAAGGAGATAGTTAACTGTCCTGAACCTGAGATCTATGCTATGCTC
AAAGAATGTAATATGGACCCCAATGAAGCGGTCAATAGGCTTCTTACTCAAGATACTTTT
CATGAGGTGAAGAGCAAACGTGAAAAGAGAAAAGAGAGTAAGGATACGACTGAATCTAGG
CCACGTGGTGCAATTAGCAGCTCAGGCCGTGGTAGCAGGGGAGGTGCAGAACGATATGTT
GGACGCGGTGGGTCAGAGTCTACCAGGCCTATTCCTGGATACAGAAAAGAGAATGGATCA
AATACGAGTAACCTGACTTCTACTCTAGGAGTTTCCGGAAGTAACATAAGCAGGAGGGCT
ACAACAATCAGTGATATCGCTGCAAATGAAAGTAAAAAGTCAGCACCTACAGCAGTTGAT
GGTGTTTCATCAGTCTGTGAGACTTCTTCTGGATATCAACCTACTTGGGGCGGGGTGCCT
GGTCAAGTTTCCATGGCTGATATTGTGAAGATGGGTAGGCCACAGAGCAAAGTTCCAAGT
GCACCTAATGTATCTCACCACAATGTCAATGCCAACCAAAACCATATTCAGGGGCTCCCT
TCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCATACTACCAAAGTTTCTGAG
GTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCA
TCAGTTGCTAGTCAGACATCTATCTCAGAGCCACCTGCTGATTCAGAGCTGCATCCTGAT
CCAGCTAACTTGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGG
ACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTCCAAGCAGAAGGTTGCAGGAGGAT
AATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTATGGATATCAGAACCAGAATCAT
ACTTTTGACCATCAACAAGTTGAAGATGTTAACGACTCTGTTTCATCAGTTGCTGCAAAC
CTGCAACAGTTGAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCT
GTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGT
AGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACG
AGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTCGGGATCC
AGAGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATAC
CATAGAACTAATGCAAGTTCTGTAAATTACGATTCATCTTCTGCTTCACAACCAGAACCT
TTGACATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCCTCTGCTGCTGGC
TACACGTATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCC
CAGATGCAAAATCTCACTCCTTTCTCTAATGTAATGGCATTCACAAATTCATTGCCTAGC
ACCTTGTCGGCTGCTAATGTTCATGCTGGTCGTGAAACTGATCTTTCATACTTGCCATTT
TCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCA
ACAATTTCCATGCCTGAGTCTTTGAAGAGTGCTGGTTTTCCATCAGCACAGTCTACACAG
CAGACACTTTCTGGAACTAGTGTCACCACCGGACCTACTGTGCCGCAACATCTTGCTGTG
CATCCATATAACCAACCAACACTACCTCTGGGACCATTTGGTAACATGATAAGTTATCCC
TTTATGCCTCAGAGTTATACATATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAAC
AGTAATTATCATCAGTCGCTGGCGGCGGTGCTTCCCCAATATAAGAACAGTGTGTCAGTC
AGCAGCTTACCTCAACCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCA
AGTATCCCTGGTAACTTCCCAATGAACCCCTCTGCTGCTCCTTCTGGTACTAACTTGAGT
TACGATGATATGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAG
AGCGAGAACTCAGCTATGTGGCTTCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCT
GCTAACACATATTATGCTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCT
CAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCT
GGGATCTCATTAGAACATCAACAGCAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCC
CAAGGCCAGCCAAAGCCGTCTCAACAGCTATGGCAAAGTGGCGGCTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005540
PEP Infomation

pacid=37427577 transcript=PGSC0003DMT400007972 locus=PGSC0003DMG400003082 ID=PGSC0003DMT400007972.v4.03 annot-version=v4.03
Sequence

MSSRNNGGVGVQSIPAGSRKMVQSLKEIVNCPEPEIYAMLKECNMDPNEAVNRLLTQDTF
HEVKSKREKRKESKDTTESRPRGAISSSGRGSRGGAERYVGRGGSESTRPIPGYRKENGS
NTSNLTSTLGVSGSNISRRATTISDIAANESKKSAPTAVDGVSSVCETSSGYQPTWGGVP
GQVSMADIVKMGRPQSKVPSAPNVSHHNVNANQNHIQGLPSGASHQNTQWSDDHTTKVSE
VHREPQHLSTDEEWPLIEPPSVASQTSISEPPADSELHPDPANLSYDRINHQNEIDEVQG
TDNCTIENLGSPPSRRLQEDNAGGASIYENDLYGYQNQNHTFDHQQVEDVNDSVSSVAAN
LQQLNVQDDGGVPPEGDGPSVVIPDHLQVQTADCSHLSFGSFGSGIGGSFSGPLASAPVT
STLEDAPKEVDGSSVGHSGSRASEYYGDESLRHASESNLYHRTNASSVNYDSSSASQPEP
LTSETNEQGNQYSYPSSAAGYTYESAQQLTAAFSQPQTSSQMQNLTPFSNVMAFTNSLPS
TLSAANVHAGRETDLSYLPFSATQAMAMKYGSSVSSIGGSTISMPESLKSAGFPSAQSTQ
QTLSGTSVTTGPTVPQHLAVHPYNQPTLPLGPFGNMISYPFMPQSYTYMPSAFQQPFAGN
SNYHQSLAAVLPQYKNSVSVSSLPQPASVASAYGGFGNTASIPGNFPMNPSAAPSGTNLS
YDDMLSSQYKDTNHLMSLQQSENSAMWLHGPGSRTMSAVPANTYYAFQGQNQQSSGFRQA
QQPLQNHGSLGYPNFYHSQAGISLEHQQQNPRDGSLGGGSQGQPKPSQQLWQSGGY*

Transcript Sequence

Transcript ID

PGSC0003DMT400007972
Transcript Infomation

pacid=37427577 locus=PGSC0003DMG400003082 ID=PGSC0003DMT400007972.v4.03 annot-version=v4.03
Sequence

ATGAGTAGCAGAAACAATGGTGGAGTTGGGGTACAATCGATACCCGCAGGGTCAAGAAAG
ATGGTACAAAGCTTAAAGGAGATAGTTAACTGTCCTGAACCTGAGATCTATGCTATGCTC
AAAGAATGTAATATGGACCCCAATGAAGCGGTCAATAGGCTTCTTACTCAAGATACTTTT
CATGAGGTGAAGAGCAAACGTGAAAAGAGAAAAGAGAGTAAGGATACGACTGAATCTAGG
CCACGTGGTGCAATTAGCAGCTCAGGCCGTGGTAGCAGGGGAGGTGCAGAACGATATGTT
GGACGCGGTGGGTCAGAGTCTACCAGGCCTATTCCTGGATACAGAAAAGAGAATGGATCA
AATACGAGTAACCTGACTTCTACTCTAGGAGTTTCCGGAAGTAACATAAGCAGGAGGGCT
ACAACAATCAGTGATATCGCTGCAAATGAAAGTAAAAAGTCAGCACCTACAGCAGTTGAT
GGTGTTTCATCAGTCTGTGAGACTTCTTCTGGATATCAACCTACTTGGGGCGGGGTGCCT
GGTCAAGTTTCCATGGCTGATATTGTGAAGATGGGTAGGCCACAGAGCAAAGTTCCAAGT
GCACCTAATGTATCTCACCACAATGTCAATGCCAACCAAAACCATATTCAGGGGCTCCCT
TCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCATACTACCAAAGTTTCTGAG
GTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCA
TCAGTTGCTAGTCAGACATCTATCTCAGAGCCACCTGCTGATTCAGAGCTGCATCCTGAT
CCAGCTAACTTGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGG
ACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTCCAAGCAGAAGGTTGCAGGAGGAT
AATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTATGGATATCAGAACCAGAATCAT
ACTTTTGACCATCAACAAGTTGAAGATGTTAACGACTCTGTTTCATCAGTTGCTGCAAAC
CTGCAACAGTTGAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCT
GTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGT
AGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACG
AGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTCGGGATCC
AGAGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATAC
CATAGAACTAATGCAAGTTCTGTAAATTACGATTCATCTTCTGCTTCACAACCAGAACCT
TTGACATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCCTCTGCTGCTGGC
TACACGTATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCC
CAGATGCAAAATCTCACTCCTTTCTCTAATGTAATGGCATTCACAAATTCATTGCCTAGC
ACCTTGTCGGCTGCTAATGTTCATGCTGGTCGTGAAACTGATCTTTCATACTTGCCATTT
TCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCA
ACAATTTCCATGCCTGAGTCTTTGAAGAGTGCTGGTTTTCCATCAGCACAGTCTACACAG
CAGACACTTTCTGGAACTAGTGTCACCACCGGACCTACTGTGCCGCAACATCTTGCTGTG
CATCCATATAACCAACCAACACTACCTCTGGGACCATTTGGTAACATGATAAGTTATCCC
TTTATGCCTCAGAGTTATACATATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAAC
AGTAATTATCATCAGTCGCTGGCGGCGGTGCTTCCCCAATATAAGAACAGTGTGTCAGTC
AGCAGCTTACCTCAACCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCA
AGTATCCCTGGTAACTTCCCAATGAACCCCTCTGCTGCTCCTTCTGGTACTAACTTGAGT
TACGATGATATGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAG
AGCGAGAACTCAGCTATGTGGCTTCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCT
GCTAACACATATTATGCTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCT
CAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCT
GGGATCTCATTAGAACATCAACAGCAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCC
CAAGGCCAGCCAAAGCCGTCTCAACAGCTATGGCAAAGTGGCGGCTACTAA