Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007960
CDS Infomation

pacid=37426164 polypeptide=PGSC0003DMP400005531 locus=PGSC0003DMG400003078 ID=PGSC0003DMT400007960.v4.03 annot-version=v4.03
Sequence

ATGGAGGATAATAATAATGGAGAAAAAAAAGGAGATGAAGATCAAAAAGTGTCATTCTAC
AAATTATTTTCTTTTGCAGATAAATTTGATGTTGCCCTAATGATAATTGGAACAATTGGA
GCTATTGGCAATGGATTAACTCAACCTTTAATGACACTTATTTTTGGCCAGCTTGTTAAT
TCTTTTGGTTCTTCAAATTCTGATGAAGTTGTACATAAAATCTCAAAGGTTTCTATTGAC
TATGTCTACCTCGCTATTGGAGCTGGCGTTGCATCCCTTTTACAAATGTCATGTTGGATG
GTTACTGGAGAGAGACAAGCGACTCGAATTCGAGGACTATATTTGAAGACAATACTGAGG
CAGGACATTGCCTTTTTTGACACTGAAACAACAACAGGAGAAGTCATTGGAAGAATGTCT
GGAGATACTATTCTCATTCAAGATGCCTTGGGTGAAAAGGTTGGGAAGTTCATTCAATTC
ATCTCAACATTTGTTGGAGGGTTCGTAGTCGCGTTCTTTAAGGGATGGCTTCTGTCGATA
GTCTTGGTGTCTTGCATACCTGCTCTTGTCATTGCTGGAGGAGCTATGGCATTGATCATG
TCCAAAATGTCAAGTCGCGGACAAGTTGCCTATGCACAAGCTGGAAATGTAGTAGAGCAA
ACAATAGGAGCAATCAGAACAGTTTCAGCATTCACCGGAGAGAAGCTGGCGATAGATAAG
TATGACAGCAAACTGAAAATTGCCTGTGCTTCTACTGTCCAACAAGGGCTTGTTTCAGGC
GTTGGACTTGGCACGGTCTTGCTCATTGTTTTTTCTACTTATGGACTTGCTGTTTGGTAT
GGTTCCAAGCTGATAATAGAGAGAGGTTATAATGGTGGAGATGTCATCAATGTTATTATG
GCTATAATGACTGGTGGAATGTCTCTAGGCCAAACAACGCCATCTTTGAACGCGTTTGCA
GCAGGACAGGCTGCAGCATACAAAATGTTTGAGACAATCAACCGGAAGCCTCTGATTGAC
ACATCGGACACAAATGGGGTTGTGTTGGAAAACATCAAGGGTGAAATTGAACTTAAAGAT
GTGTACTTTAGGTATCCAGCCAGGCCAGATGTGCAGATCTTTAGTGGATTCTCACTTATC
GTTCCTAATGGCAAAACTGTAGCTTTGGTTGGGCAAAGTGGAAGTGGGAAGTCCACAGTT
ATCAGTTTACTGGAGAGATTCTATGATCCTGAGGCTGGAGAAGTATTAATAGATGGTGTC
AATTTGAAGAAATTTCAACTCAAATGGCTAAGGCAACAGATGGGATTGGTAAGTCAGGAA
CCTATCCTGTTTGCGACAACCATAAAAGAGAATATCAGTTATGGTAAAGAAAATGCTACT
GAAGATGAGATTAAGACAGCTATTGAGCTTGCTAATGCTGCTAAGTTCCTCGATAAACTT
CCTCAGGGGCTAGACACTATGGTAGGTGAGCATGGAACACAACTATCTGGTGGACAAAAG
CAAAGACTTGCAATAGCAAGGGCTATCTTAAAGAACCCAAGAATACTCCTCCTTGATGAA
GCTACAAGTGCACTTGATGCTGAATCAGAGCGAATCGTGCAAGAAGCACTCGAAAAAGTC
ATGGCAAATAGAACAACCGTTGTTGTTGCTCATCGTCTAACAACCATTAGAAATGCTGAT
CTTATAGCGGTGGTGAATGCTGGAAAACTAATAGAGAAAGGAACACATACTGAGTTGATA
CAAGATCCAAATGGGGCATATTCCCAGCTTGTGCGAATGCAGGGAGGGAATAGAGAAGAA
GAAAACATGAAAAATATGGACCTTGAGAAGGTGGATTTAACCACGGATTTGGATAATAAC
CTGAGCAGGTCATCAAGCCAGCAATTGTCAGCAATGAGGCGATCAACAAGCCAGGGATCA
TCTAGACATTCTTTCACACTCAACTATACTGTTCCTGGGCTAGTTGGTATTCACGAAGCA
GAAATAGGAGATGAGGACAAGCAAAAAGAAGATAAGGGAAGCTTAAAGAAACGAAAGAAT
GTTTCCATTAGGCGGCTTGCTGGACTAAACAAACCTGAGCTTCCATATCTGTTACTTGGA
TCATTGGCTGCAATCATACATGGTCTTATTTTCCCATTATTTGGACTCTTACTATCGACA
GCTATTAAAATATTCTTTTACCCACCACAAAAGCTGCGAAGTGAATCAAGATTCTGGGCA
CTCATGTATTTTGGCCTTGGTGTGGTAACTTTGCTAGTTGTACCTTTCCAGAACTACTTA
TTCGGAGTTGCAGGGGGGAAATTGATCGAGAGAATTCGTTCTTTGACATTTAAGAAAGTA
GTCCACCAAGAAATCAGCTGGTTCGATGATCCTGCACATTCAAGTGGTGCAATTGGTGCA
AGGTTATCAACTGATGCTTCCACGGTCAGGACTCTTATGGGTGATGCACTGGCACTTATT
GTACAGAACATAGCAACTGTAGTAGCCGGCCTCGTGATAGCCTTCACTGCCAATTGGATT
TTAGCACTTATAATCCTTCTCGTGATGCCTTTAATTGGTGTGCAAGGATTCCTCCAGACC
AAGATGTACAAAGGCTTTAGTGCTGATGCAAAGGTGATGTATGAAGAAGCTAGTCAAATA
GCAAACGATGCTGTCGGGAGTATAAGAACAGTGGCATCATTCTGTGCAGAGGAGAAAGTG
ATGGACATGTACCAAAAGAAATGTGAAGGTCCAATGAAGCAAGGAGTGAAGATTGGAATT
GTTAGTGGAGCAAGCTTAGGCTTTGGTTCTTTTATACTGTATTGTACAAATGCCTTCTGT
TTCTACATAGGATCCATCCTTATTCAGCATGGATTGGCATCATTTGGCCAAGTTTTTAAG
GTTTTCTTTGCATTGACTCTATCAGCTGTTGGGGTTACACAAAGCACAGGAATGGCTCCA
GATGCTAGCAAAGCCAAGGATTCTATAGCCTCTATATTTGACATTCTTGACAGAAAACCC
GAGATTGACTCAAGTTCTGATGTTGGTACTACTCTAGCTGCTGTTCGCGGAGATATTGAA
TTCAAACATGTGAGTTACAGGTATGCAACTCGCCCGGATGTCCAAATCTTCAAGGATTTA
TGCCTAACTATCCCTTCTGGAAAGACTGTTGCTCTAGTGGGAGAGAGTGGAAGTGGTAAA
TCAACTGTCATTAGCCTAATAGAGAGGTTCTACAATCCTGAATCAGGATCGATATATTTG
GATGGTGTGGAAATCCGACAATTCAAGCTAAGTTGGCTAAGACAACAAATGGGCCTGGTT
AGTCAAGAACCAGTACTGTTTAACGAAACAATTCGTGACAACATTGCCTACAGCAGACAA
GGGCATGCAACAGAAGAAGAGATCATTGAAGCAGCAAAATCAGCAAATGCACACAACTTT
ATATCTTCATTGCCTCAAGGATATGATACATCGGTTGGGGAAAGAGGAATACAATTATCA
GGTGGACAAAAGCAAAGAATAGCTATTGCAAGAGCTATACTGAAGGATCCAAAGATTCTT
TTGCTAGACGAGGCAACAAGTGCTTTAGATGCAGAATCAGAACGTATAGTTCAAGAAGCA
TTGGATCGAGTAATGGTAAATAGGACGACTGTGGTTGTAGCTCATCGCTTAACCACAATC
AAAGGAGCTGATGTCATTGCTGTTGTGAAGAATGGAGTCATTGCTGAGGAAGGAAGGCAT
GATGCTCTTATGAACATAAAAGATGGAGTTTATGCATCCTTAGTAGCATTGCATATGACT
TCAGCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005531
PEP Infomation

pacid=37426164 transcript=PGSC0003DMT400007960 locus=PGSC0003DMG400003078 ID=PGSC0003DMT400007960.v4.03 annot-version=v4.03
Sequence

MEDNNNGEKKGDEDQKVSFYKLFSFADKFDVALMIIGTIGAIGNGLTQPLMTLIFGQLVN
SFGSSNSDEVVHKISKVSIDYVYLAIGAGVASLLQMSCWMVTGERQATRIRGLYLKTILR
QDIAFFDTETTTGEVIGRMSGDTILIQDALGEKVGKFIQFISTFVGGFVVAFFKGWLLSI
VLVSCIPALVIAGGAMALIMSKMSSRGQVAYAQAGNVVEQTIGAIRTVSAFTGEKLAIDK
YDSKLKIACASTVQQGLVSGVGLGTVLLIVFSTYGLAVWYGSKLIIERGYNGGDVINVIM
AIMTGGMSLGQTTPSLNAFAAGQAAAYKMFETINRKPLIDTSDTNGVVLENIKGEIELKD
VYFRYPARPDVQIFSGFSLIVPNGKTVALVGQSGSGKSTVISLLERFYDPEAGEVLIDGV
NLKKFQLKWLRQQMGLVSQEPILFATTIKENISYGKENATEDEIKTAIELANAAKFLDKL
PQGLDTMVGEHGTQLSGGQKQRLAIARAILKNPRILLLDEATSALDAESERIVQEALEKV
MANRTTVVVAHRLTTIRNADLIAVVNAGKLIEKGTHTELIQDPNGAYSQLVRMQGGNREE
ENMKNMDLEKVDLTTDLDNNLSRSSSQQLSAMRRSTSQGSSRHSFTLNYTVPGLVGIHEA
EIGDEDKQKEDKGSLKKRKNVSIRRLAGLNKPELPYLLLGSLAAIIHGLIFPLFGLLLST
AIKIFFYPPQKLRSESRFWALMYFGLGVVTLLVVPFQNYLFGVAGGKLIERIRSLTFKKV
VHQEISWFDDPAHSSGAIGARLSTDASTVRTLMGDALALIVQNIATVVAGLVIAFTANWI
LALIILLVMPLIGVQGFLQTKMYKGFSADAKVMYEEASQIANDAVGSIRTVASFCAEEKV
MDMYQKKCEGPMKQGVKIGIVSGASLGFGSFILYCTNAFCFYIGSILIQHGLASFGQVFK
VFFALTLSAVGVTQSTGMAPDASKAKDSIASIFDILDRKPEIDSSSDVGTTLAAVRGDIE
FKHVSYRYATRPDVQIFKDLCLTIPSGKTVALVGESGSGKSTVISLIERFYNPESGSIYL
DGVEIRQFKLSWLRQQMGLVSQEPVLFNETIRDNIAYSRQGHATEEEIIEAAKSANAHNF
ISSLPQGYDTSVGERGIQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERIVQEA
LDRVMVNRTTVVVAHRLTTIKGADVIAVVKNGVIAEEGRHDALMNIKDGVYASLVALHMT
SA*

Transcript Sequence

Transcript ID

PGSC0003DMT400007960
Transcript Infomation

pacid=37426164 locus=PGSC0003DMG400003078 ID=PGSC0003DMT400007960.v4.03 annot-version=v4.03
Sequence

ATGGAGGATAATAATAATGGAGAAAAAAAAGGAGATGAAGATCAAAAAGTGTCATTCTAC
AAATTATTTTCTTTTGCAGATAAATTTGATGTTGCCCTAATGATAATTGGAACAATTGGA
GCTATTGGCAATGGATTAACTCAACCTTTAATGACACTTATTTTTGGCCAGCTTGTTAAT
TCTTTTGGTTCTTCAAATTCTGATGAAGTTGTACATAAAATCTCAAAGGTTTCTATTGAC
TATGTCTACCTCGCTATTGGAGCTGGCGTTGCATCCCTTTTACAAATGTCATGTTGGATG
GTTACTGGAGAGAGACAAGCGACTCGAATTCGAGGACTATATTTGAAGACAATACTGAGG
CAGGACATTGCCTTTTTTGACACTGAAACAACAACAGGAGAAGTCATTGGAAGAATGTCT
GGAGATACTATTCTCATTCAAGATGCCTTGGGTGAAAAGGTTGGGAAGTTCATTCAATTC
ATCTCAACATTTGTTGGAGGGTTCGTAGTCGCGTTCTTTAAGGGATGGCTTCTGTCGATA
GTCTTGGTGTCTTGCATACCTGCTCTTGTCATTGCTGGAGGAGCTATGGCATTGATCATG
TCCAAAATGTCAAGTCGCGGACAAGTTGCCTATGCACAAGCTGGAAATGTAGTAGAGCAA
ACAATAGGAGCAATCAGAACAGTTTCAGCATTCACCGGAGAGAAGCTGGCGATAGATAAG
TATGACAGCAAACTGAAAATTGCCTGTGCTTCTACTGTCCAACAAGGGCTTGTTTCAGGC
GTTGGACTTGGCACGGTCTTGCTCATTGTTTTTTCTACTTATGGACTTGCTGTTTGGTAT
GGTTCCAAGCTGATAATAGAGAGAGGTTATAATGGTGGAGATGTCATCAATGTTATTATG
GCTATAATGACTGGTGGAATGTCTCTAGGCCAAACAACGCCATCTTTGAACGCGTTTGCA
GCAGGACAGGCTGCAGCATACAAAATGTTTGAGACAATCAACCGGAAGCCTCTGATTGAC
ACATCGGACACAAATGGGGTTGTGTTGGAAAACATCAAGGGTGAAATTGAACTTAAAGAT
GTGTACTTTAGGTATCCAGCCAGGCCAGATGTGCAGATCTTTAGTGGATTCTCACTTATC
GTTCCTAATGGCAAAACTGTAGCTTTGGTTGGGCAAAGTGGAAGTGGGAAGTCCACAGTT
ATCAGTTTACTGGAGAGATTCTATGATCCTGAGGCTGGAGAAGTATTAATAGATGGTGTC
AATTTGAAGAAATTTCAACTCAAATGGCTAAGGCAACAGATGGGATTGGTAAGTCAGGAA
CCTATCCTGTTTGCGACAACCATAAAAGAGAATATCAGTTATGGTAAAGAAAATGCTACT
GAAGATGAGATTAAGACAGCTATTGAGCTTGCTAATGCTGCTAAGTTCCTCGATAAACTT
CCTCAGGGGCTAGACACTATGGTAGGTGAGCATGGAACACAACTATCTGGTGGACAAAAG
CAAAGACTTGCAATAGCAAGGGCTATCTTAAAGAACCCAAGAATACTCCTCCTTGATGAA
GCTACAAGTGCACTTGATGCTGAATCAGAGCGAATCGTGCAAGAAGCACTCGAAAAAGTC
ATGGCAAATAGAACAACCGTTGTTGTTGCTCATCGTCTAACAACCATTAGAAATGCTGAT
CTTATAGCGGTGGTGAATGCTGGAAAACTAATAGAGAAAGGAACACATACTGAGTTGATA
CAAGATCCAAATGGGGCATATTCCCAGCTTGTGCGAATGCAGGGAGGGAATAGAGAAGAA
GAAAACATGAAAAATATGGACCTTGAGAAGGTGGATTTAACCACGGATTTGGATAATAAC
CTGAGCAGGTCATCAAGCCAGCAATTGTCAGCAATGAGGCGATCAACAAGCCAGGGATCA
TCTAGACATTCTTTCACACTCAACTATACTGTTCCTGGGCTAGTTGGTATTCACGAAGCA
GAAATAGGAGATGAGGACAAGCAAAAAGAAGATAAGGGAAGCTTAAAGAAACGAAAGAAT
GTTTCCATTAGGCGGCTTGCTGGACTAAACAAACCTGAGCTTCCATATCTGTTACTTGGA
TCATTGGCTGCAATCATACATGGTCTTATTTTCCCATTATTTGGACTCTTACTATCGACA
GCTATTAAAATATTCTTTTACCCACCACAAAAGCTGCGAAGTGAATCAAGATTCTGGGCA
CTCATGTATTTTGGCCTTGGTGTGGTAACTTTGCTAGTTGTACCTTTCCAGAACTACTTA
TTCGGAGTTGCAGGGGGGAAATTGATCGAGAGAATTCGTTCTTTGACATTTAAGAAAGTA
GTCCACCAAGAAATCAGCTGGTTCGATGATCCTGCACATTCAAGTGGTGCAATTGGTGCA
AGGTTATCAACTGATGCTTCCACGGTCAGGACTCTTATGGGTGATGCACTGGCACTTATT
GTACAGAACATAGCAACTGTAGTAGCCGGCCTCGTGATAGCCTTCACTGCCAATTGGATT
TTAGCACTTATAATCCTTCTCGTGATGCCTTTAATTGGTGTGCAAGGATTCCTCCAGACC
AAGATGTACAAAGGCTTTAGTGCTGATGCAAAGGTGATGTATGAAGAAGCTAGTCAAATA
GCAAACGATGCTGTCGGGAGTATAAGAACAGTGGCATCATTCTGTGCAGAGGAGAAAGTG
ATGGACATGTACCAAAAGAAATGTGAAGGTCCAATGAAGCAAGGAGTGAAGATTGGAATT
GTTAGTGGAGCAAGCTTAGGCTTTGGTTCTTTTATACTGTATTGTACAAATGCCTTCTGT
TTCTACATAGGATCCATCCTTATTCAGCATGGATTGGCATCATTTGGCCAAGTTTTTAAG
GTTTTCTTTGCATTGACTCTATCAGCTGTTGGGGTTACACAAAGCACAGGAATGGCTCCA
GATGCTAGCAAAGCCAAGGATTCTATAGCCTCTATATTTGACATTCTTGACAGAAAACCC
GAGATTGACTCAAGTTCTGATGTTGGTACTACTCTAGCTGCTGTTCGCGGAGATATTGAA
TTCAAACATGTGAGTTACAGGTATGCAACTCGCCCGGATGTCCAAATCTTCAAGGATTTA
TGCCTAACTATCCCTTCTGGAAAGACTGTTGCTCTAGTGGGAGAGAGTGGAAGTGGTAAA
TCAACTGTCATTAGCCTAATAGAGAGGTTCTACAATCCTGAATCAGGATCGATATATTTG
GATGGTGTGGAAATCCGACAATTCAAGCTAAGTTGGCTAAGACAACAAATGGGCCTGGTT
AGTCAAGAACCAGTACTGTTTAACGAAACAATTCGTGACAACATTGCCTACAGCAGACAA
GGGCATGCAACAGAAGAAGAGATCATTGAAGCAGCAAAATCAGCAAATGCACACAACTTT
ATATCTTCATTGCCTCAAGGATATGATACATCGGTTGGGGAAAGAGGAATACAATTATCA
GGTGGACAAAAGCAAAGAATAGCTATTGCAAGAGCTATACTGAAGGATCCAAAGATTCTT
TTGCTAGACGAGGCAACAAGTGCTTTAGATGCAGAATCAGAACGTATAGTTCAAGAAGCA
TTGGATCGAGTAATGGTAAATAGGACGACTGTGGTTGTAGCTCATCGCTTAACCACAATC
AAAGGAGCTGATGTCATTGCTGTTGTGAAGAATGGAGTCATTGCTGAGGAAGGAAGGCAT
GATGCTCTTATGAACATAAAAGATGGAGTTTATGCATCCTTAGTAGCATTGCATATGACT
TCAGCCTGA