Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007954
CDS Infomation

pacid=37428998 polypeptide=PGSC0003DMP400005528 locus=PGSC0003DMG400003076 ID=PGSC0003DMT400007954.v4.03 annot-version=v4.03
Sequence

ATGGATGCTTTGAGGAAGCAAGCTAGTAAGCTCAGAGAACAAGTCGCTAAACAGCAACAG
GCAGTCATCAAGCAGTTTAGTGCAACTGGTTATGAAAGTTCAGATGTTATGGTCATTGAT
GAAATGGAGATGCAATTGCATCATCAACTGGACAAGTTGTATAAGTCTACCCGGGAGAAA
AGGGATTTTCAGAGAGAGATTGTTAAGGCAGCTGAAACATTTACAGCTATAGGATACAAG
CATATAGAAACAGGAACTAAATTGTCAGAAGATTGCTGCAAATATGGAGTCGAAAATCCC
AATGACGAGGTGTTAGCTAAGGCTGCTTCTATTTACGGTGATGCTCGTAAACATGCAGAG
AAGGAGGTTGAAGATCTAAATAAACTATTCTTCAGTCAGGTACTGGAACCAATGAGAGCT
ATGGTAGCTGGTTCTCCCTTAGAGGATGCTCGTCATCTTGCTCAGCGCTACAGTAAAATG
AGGCAAGAGGCGGAGATACAGGCAGCCGAAGTTTCTAGAAGACAAGCTCGGGTGAGGGAA
GCTCCCATCCCAGAGAATGTGGCAAAGCTGCACGCAGCAGAAACTAAAATGCAGGAACTC
AAAGCCAACATGACAATACTCGGTAAAGAAGCAGCAGCAGCATTAGCTGCTGTAGAATCA
CAGCAGGAGAGGCTTACATTTCAGAGGCTTGTTGCAATGGTTGAAGCAGAAAAGCTTTAT
CATGAGAGAGTTGCTGTTATTCTGGGTAACATTGAAGCTGAGATAGTTTCTGAAAAGCAG
CGAAAAGAGGCTGCTCCTCCTGTAGCCACACTTGCTGTAAACCCTCCGGCCCACATACCT
GAGAAAACGAAATACTTTTTGGCCGAGGCTATTCATTCTTTTGAAGCTGAATCAGAAAAG
GAGCTAAGCTTGTCTGTCGGTGATTATGTTGTTGTTCGTAAGGTGACTCAATCAGGGTGG
TCAGAAGGAGAATGCCAAGGCAGGGCAGGTTGGTTTCCATCTGAGTACGTGGAGAAACGA
CAAAGAGTACCTACTTCTAATGGAGCAACGGAAGTTTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005528
PEP Infomation

pacid=37428998 transcript=PGSC0003DMT400007954 locus=PGSC0003DMG400003076 ID=PGSC0003DMT400007954.v4.03 annot-version=v4.03
Sequence

MDALRKQASKLREQVAKQQQAVIKQFSATGYESSDVMVIDEMEMQLHHQLDKLYKSTREK
RDFQREIVKAAETFTAIGYKHIETGTKLSEDCCKYGVENPNDEVLAKAASIYGDARKHAE
KEVEDLNKLFFSQVLEPMRAMVAGSPLEDARHLAQRYSKMRQEAEIQAAEVSRRQARVRE
APIPENVAKLHAAETKMQELKANMTILGKEAAAALAAVESQQERLTFQRLVAMVEAEKLY
HERVAVILGNIEAEIVSEKQRKEAAPPVATLAVNPPAHIPEKTKYFLAEAIHSFEAESEK
ELSLSVGDYVVVRKVTQSGWSEGECQGRAGWFPSEYVEKRQRVPTSNGATEVY*

Transcript Sequence

Transcript ID

PGSC0003DMT400007954
Transcript Infomation

pacid=37428998 locus=PGSC0003DMG400003076 ID=PGSC0003DMT400007954.v4.03 annot-version=v4.03
Sequence

ATGGATGCTTTGAGGAAGCAAGCTAGTAAGCTCAGAGAACAAGTCGCTAAACAGCAACAG
GCAGTCATCAAGCAGTTTAGTGCAACTGGTTATGAAAGTTCAGATGTTATGGTCATTGAT
GAAATGGAGATGCAATTGCATCATCAACTGGACAAGTTGTATAAGTCTACCCGGGAGAAA
AGGGATTTTCAGAGAGAGATTGTTAAGGCAGCTGAAACATTTACAGCTATAGGATACAAG
CATATAGAAACAGGAACTAAATTGTCAGAAGATTGCTGCAAATATGGAGTCGAAAATCCC
AATGACGAGGTGTTAGCTAAGGCTGCTTCTATTTACGGTGATGCTCGTAAACATGCAGAG
AAGGAGGTTGAAGATCTAAATAAACTATTCTTCAGTCAGGTACTGGAACCAATGAGAGCT
ATGGTAGCTGGTTCTCCCTTAGAGGATGCTCGTCATCTTGCTCAGCGCTACAGTAAAATG
AGGCAAGAGGCGGAGATACAGGCAGCCGAAGTTTCTAGAAGACAAGCTCGGGTGAGGGAA
GCTCCCATCCCAGAGAATGTGGCAAAGCTGCACGCAGCAGAAACTAAAATGCAGGAACTC
AAAGCCAACATGACAATACTCGGTAAAGAAGCAGCAGCAGCATTAGCTGCTGTAGAATCA
CAGCAGGAGAGGCTTACATTTCAGAGGCTTGTTGCAATGGTTGAAGCAGAAAAGCTTTAT
CATGAGAGAGTTGCTGTTATTCTGGGTAACATTGAAGCTGAGATAGTTTCTGAAAAGCAG
CGAAAAGAGGCTGCTCCTCCTGTAGCCACACTTGCTGTAAACCCTCCGGCCCACATACCT
GAGAAAACGAAATACTTTTTGGCCGAGGCTATTCATTCTTTTGAAGCTGAATCAGAAAAG
GAGCTAAGCTTGTCTGTCGGTGATTATGTTGTTGTTCGTAAGGTGACTCAATCAGGGTGG
TCAGAAGGAGAATGCCAAGGCAGGGCAGGTTGGTTTCCATCTGAGTACGTGGAGAAACGA
CAAAGAGTACCTACTTCTAATGGAGCAACGGAAGTTTACTGA