Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007946
CDS Infomation

pacid=37427210 polypeptide=PGSC0003DMP400005522 locus=PGSC0003DMG400003073 ID=PGSC0003DMT400007946.v4.03 annot-version=v4.03
Sequence

ATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTC
TGCTGTTCTCAAAGACTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTTTGGAAAAT
CCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCTTCCCTTTGCTGAACTGC
ACTGCTACCGAAGAGATCGTGGAGGCTAGTGAGACAGAGGGATTATTTGTTGAAACTGGG
TACATATATAGTGTTCATGGGCTTCAAGGAGAGGTTCGAGTAAAAGCGACAACTGATTTC
CCTGAATTGCGATTTTCCCAGCCAGGAAGACGATGGTTGAGGCAGCAAGTTACAGGGAGA
GATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGG
ATACTTAAATTCCACGAGATTAGCACAATAGAGCAGGCTCAAAAACTTGTGGGGTCGGCC
TTACTGGTGAAGGATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGAC
CTTGTTGGGATGAAAGTATTTCTAAAGGAAACTAGAGAACTGGTAGGAACTGTTATTAAT
GTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGGATCGAAATGCA
AGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCA
ATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTT
TTAGAATTAAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTTGAATGG
AAAGAGAGAAAAAAGTCTCAGAAACGCCTCATAGCAGCCAAGAAAATATTGCATGAAATG
GAACAAGATCATATATTTCATGGTTTCAGATATGGAGAGAAAAACCAAAGGAGCTTCCTT
GCAAATCAGATAGTTGATGTAAATTCCATCTTGCTTCAGCATGCCTTGCAGAATAAAAAG
ATTCCATATAAGAGATGGAGCTTTCCAGACTTTGTTAATGCTTTACAAGTAAACAATACA
TTAAAACTATCCAAAGAATTCTTCTCTAAAGAAAATGTTGAACACTCAAGCATTGGTTCT
AAAGTTCAAGAGCAGGGTCATTGCCTCATATCTTCTGGCAAGGTTGCGATTGTTTTAGCT
TTGACAGAAAGTAAACCTGCTGGGCCTCATGAGGAGATTGCTTATCTGCACGTCAAGGCA
TTGCTAAATGACAGCCACAGATTGCTCAAGATGGAGGACCGGCCCTCTGTACCTCTTATA
GTGGTGTGTCCTGCTGAATCTATTGAATATCTCAAACAATTGTTCATGGATCATGACTAC
TTCTCTTTCGACTCTGAGAAGGTTTGGTTCTTGGAAGAAGAGAAGCTCCCTGTTGTCAGT
GCTTCTCAGGAAGAAGAAAACAAACATAAAATTTTAATGAAATCACCATGGGAGATACTC
CAAAGACCAGCTGGATCTGCAGGAATTGTTACTTTGCTCTCATCACAGAACCTACTAGAG
CATTTACATGTGATGGGCGTGGAGTATATTCAGGTATGCTCTGGCAATCAAGAATTCATA
AATGGGGAGATGCTACTTGGTTTTACTAAGTCTCGTGAAGCCAATGCGGGGATCCAAGTC
TTCAGGGATGCTGGCTACTTGGAAGAACACTTCAACATAGTATTTTCCATCGATTTTGCA
AAGAAATTGACTAAGAAGATAGACAAACTTCAATTTGAAGCCATTTTAAAGCCAAATCAG
TATGTGGAGATGGTAGAAAAAGAATGGGTTGATGTCATCCCCTCCTCACCCAACTCGTAT
GAGTTTCATTCATCGATTTATAGCTGCTTGAATGCTTGTCCTCCTAGTAAGGTTTGTCTG
GTAGACATTATTGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400005522
PEP Infomation

pacid=37427210 transcript=PGSC0003DMT400007946 locus=PGSC0003DMG400003073 ID=PGSC0003DMT400007946.v4.03 annot-version=v4.03
Sequence

MQGSSALSCSSNSISAPVGLCCSQRLTLPFRNQRIGFLENPSSLKIFHFHRNTTFPLLNC
TATEEIVEASETEGLFVETGYIYSVHGLQGEVRVKATTDFPELRFSQPGRRWLRQQVTGR
DMIQEIELVEGRGHPGQKSWILKFHEISTIEQAQKLVGSALLVKDEDRPILEEGEFYTPD
LVGMKVFLKETRELVGTVINVFNSGASDLLHVELLPDRNARPQLEGSASGPLVWVPFVEA
IVPNIDLSKREMLITPPKGLLELNIRADERSKKERRQLEWKERKKSQKRLIAAKKILHEM
EQDHIFHGFRYGEKNQRSFLANQIVDVNSILLQHALQNKKIPYKRWSFPDFVNALQVNNT
LKLSKEFFSKENVEHSSIGSKVQEQGHCLISSGKVAIVLALTESKPAGPHEEIAYLHVKA
LLNDSHRLLKMEDRPSVPLIVVCPAESIEYLKQLFMDHDYFSFDSEKVWFLEEEKLPVVS
ASQEEENKHKILMKSPWEILQRPAGSAGIVTLLSSQNLLEHLHVMGVEYIQVCSGNQEFI
NGEMLLGFTKSREANAGIQVFRDAGYLEEHFNIVFSIDFAKKLTKKIDKLQFEAILKPNQ
YVEMVEKEWVDVIPSSPNSYEFHSSIYSCLNACPPSKVCLVDIIA*

Transcript Sequence

Transcript ID

PGSC0003DMT400007946
Transcript Infomation

pacid=37427210 locus=PGSC0003DMG400003073 ID=PGSC0003DMT400007946.v4.03 annot-version=v4.03
Sequence

ATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTC
TGCTGTTCTCAAAGACTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTTTGGAAAAT
CCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCTTCCCTTTGCTGAACTGC
ACTGCTACCGAAGAGATCGTGGAGGCTAGTGAGACAGAGGGATTATTTGTTGAAACTGGG
TACATATATAGTGTTCATGGGCTTCAAGGAGAGGTTCGAGTAAAAGCGACAACTGATTTC
CCTGAATTGCGATTTTCCCAGCCAGGAAGACGATGGTTGAGGCAGCAAGTTACAGGGAGA
GATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGG
ATACTTAAATTCCACGAGATTAGCACAATAGAGCAGGCTCAAAAACTTGTGGGGTCGGCC
TTACTGGTGAAGGATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGAC
CTTGTTGGGATGAAAGTATTTCTAAAGGAAACTAGAGAACTGGTAGGAACTGTTATTAAT
GTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGGATCGAAATGCA
AGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCA
ATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTT
TTAGAATTAAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTTGAATGG
AAAGAGAGAAAAAAGTCTCAGAAACGCCTCATAGCAGCCAAGAAAATATTGCATGAAATG
GAACAAGATCATATATTTCATGGTTTCAGATATGGAGAGAAAAACCAAAGGAGCTTCCTT
GCAAATCAGATAGTTGATGTAAATTCCATCTTGCTTCAGCATGCCTTGCAGAATAAAAAG
ATTCCATATAAGAGATGGAGCTTTCCAGACTTTGTTAATGCTTTACAAGTAAACAATACA
TTAAAACTATCCAAAGAATTCTTCTCTAAAGAAAATGTTGAACACTCAAGCATTGGTTCT
AAAGTTCAAGAGCAGGGTCATTGCCTCATATCTTCTGGCAAGGTTGCGATTGTTTTAGCT
TTGACAGAAAGTAAACCTGCTGGGCCTCATGAGGAGATTGCTTATCTGCACGTCAAGGCA
TTGCTAAATGACAGCCACAGATTGCTCAAGATGGAGGACCGGCCCTCTGTACCTCTTATA
GTGGTGTGTCCTGCTGAATCTATTGAATATCTCAAACAATTGTTCATGGATCATGACTAC
TTCTCTTTCGACTCTGAGAAGGTTTGGTTCTTGGAAGAAGAGAAGCTCCCTGTTGTCAGT
GCTTCTCAGGAAGAAGAAAACAAACATAAAATTTTAATGAAATCACCATGGGAGATACTC
CAAAGACCAGCTGGATCTGCAGGAATTGTTACTTTGCTCTCATCACAGAACCTACTAGAG
CATTTACATGTGATGGGCGTGGAGTATATTCAGGTATGCTCTGGCAATCAAGAATTCATA
AATGGGGAGATGCTACTTGGTTTTACTAAGTCTCGTGAAGCCAATGCGGGGATCCAAGTC
TTCAGGGATGCTGGCTACTTGGAAGAACACTTCAACATAGTATTTTCCATCGATTTTGCA
AAGAAATTGACTAAGAAGATAGACAAACTTCAATTTGAAGCCATTTTAAAGCCAAATCAG
TATGTGGAGATGGTAGAAAAAGAATGGGTTGATGTCATCCCCTCCTCACCCAACTCGTAT
GAGTTTCATTCATCGATTTATAGCTGCTTGAATGCTTGTCCTCCTAGTAAGGTTTGTCTG
GTAGACATTATTGCATGA