Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007898
CDS Infomation

pacid=37469727 polypeptide=PGSC0003DMP400005487 locus=PGSC0003DMG400003054 ID=PGSC0003DMT400007898.v4.03 annot-version=v4.03
Sequence

ATGGGTGTTCAGTGTCAAGAAAATATTTTGGTTACTGGAGGAGCTGGTTTCATTGGAACA
CACACTGTGGTGCAGTTACTGAATGAAGGGTTCAAAGTTACCATCATTGATAACTTTCAT
AATTCTGTGGAAGAAGCTGTTGATAGAGTCAGAGAATTAGTTGGTCCTCAACTTTCACAG
AATCTTGAATTCCATTTGGGTGATATTAGAAACAAAGATGACTTGGAGAAGCTATTTTCT
AAGAAAGAGTTTGCTGCTGTGGTCCATTTTGCTGGACTTAAGGCTGTTGGAGAGAGTGTT
GTTCAGCCCTTTCTTTACTTTGAGAACAATCTGATTGGATCAATAACTTTGTATTCAGTC
ATGGCCAAGTATAATTGTAAGAAGTTGGTTTTTTCATCATCTGCGACAGTTTATGGTCAG
CCTGAAAAGGTTCCCTGTGTGGAGGATTTTGAATTGAAGGCTATGAATCCTTATGGTCGA
ACAAAGCTATTTCTTGAAGATATTGCTCGGGATATCCAGAAGGCAGATCAAGAATGGAAT
ATCATACTGTTGAGGTATTTCAACCCAGTAGGAGCTCATGAAAGTGGCAAACTCGGGGAA
GATCCAAAGGGCATTCCCAACAATCTTATGCCTTACATTCAGCAAGTAGCTGTTGGTAGA
TTGCCAGAGTTGAATGTATATGGCAACGACTACCCTACACCTGATGGTACCGCGATACGA
GATTATATCCATGTTATGGATTTAGCGGACGGTCATGTTGTTGCACTTCAGAGACTTCTA
AGGCAGAATCATTTAGGTTGTGTTGCCTACAATTTGGGTACTGGAAAAGGCAAATCTGTC
CTAGAGATGGTTGCTGCTTTTGAAAGAGCGTCTGGAAAGAAAATCCCGCTTAAAATGTGT
CCAAGAAGACCAGGAGATGCCACTGCTGTTTATGCATCTACTGAAAAAGCTGAGAAGGAG
CTCGGTTGGAAGGCAAAATATGGTATAAATGAGATGTGCAGGGACCAGTGGAAATGGGCA
AGCCAAAATCCTTGGGGTTACCAATCAAAGCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005487
PEP Infomation

pacid=37469727 transcript=PGSC0003DMT400007898 locus=PGSC0003DMG400003054 ID=PGSC0003DMT400007898.v4.03 annot-version=v4.03
Sequence

MGVQCQENILVTGGAGFIGTHTVVQLLNEGFKVTIIDNFHNSVEEAVDRVRELVGPQLSQ
NLEFHLGDIRNKDDLEKLFSKKEFAAVVHFAGLKAVGESVVQPFLYFENNLIGSITLYSV
MAKYNCKKLVFSSSATVYGQPEKVPCVEDFELKAMNPYGRTKLFLEDIARDIQKADQEWN
IILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGNDYPTPDGTAIR
DYIHVMDLADGHVVALQRLLRQNHLGCVAYNLGTGKGKSVLEMVAAFERASGKKIPLKMC
PRRPGDATAVYASTEKAEKELGWKAKYGINEMCRDQWKWASQNPWGYQSKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400007898
Transcript Infomation

pacid=37469727 locus=PGSC0003DMG400003054 ID=PGSC0003DMT400007898.v4.03 annot-version=v4.03
Sequence

ATGGGTGTTCAGTGTCAAGAAAATATTTTGGTTACTGGAGGAGCTGGTTTCATTGGAACA
CACACTGTGGTGCAGTTACTGAATGAAGGGTTCAAAGTTACCATCATTGATAACTTTCAT
AATTCTGTGGAAGAAGCTGTTGATAGAGTCAGAGAATTAGTTGGTCCTCAACTTTCACAG
AATCTTGAATTCCATTTGGGTGATATTAGAAACAAAGATGACTTGGAGAAGCTATTTTCT
AAGAAAGAGTTTGCTGCTGTGGTCCATTTTGCTGGACTTAAGGCTGTTGGAGAGAGTGTT
GTTCAGCCCTTTCTTTACTTTGAGAACAATCTGATTGGATCAATAACTTTGTATTCAGTC
ATGGCCAAGTATAATTGTAAGAAGTTGGTTTTTTCATCATCTGCGACAGTTTATGGTCAG
CCTGAAAAGGTTCCCTGTGTGGAGGATTTTGAATTGAAGGCTATGAATCCTTATGGTCGA
ACAAAGCTATTTCTTGAAGATATTGCTCGGGATATCCAGAAGGCAGATCAAGAATGGAAT
ATCATACTGTTGAGGTATTTCAACCCAGTAGGAGCTCATGAAAGTGGCAAACTCGGGGAA
GATCCAAAGGGCATTCCCAACAATCTTATGCCTTACATTCAGCAAGTAGCTGTTGGTAGA
TTGCCAGAGTTGAATGTATATGGCAACGACTACCCTACACCTGATGGTACCGCGATACGA
GATTATATCCATGTTATGGATTTAGCGGACGGTCATGTTGTTGCACTTCAGAGACTTCTA
AGGCAGAATCATTTAGGTTGTGTTGCCTACAATTTGGGTACTGGAAAAGGCAAATCTGTC
CTAGAGATGGTTGCTGCTTTTGAAAGAGCGTCTGGAAAGAAAATCCCGCTTAAAATGTGT
CCAAGAAGACCAGGAGATGCCACTGCTGTTTATGCATCTACTGAAAAAGCTGAGAAGGAG
CTCGGTTGGAAGGCAAAATATGGTATAAATGAGATGTGCAGGGACCAGTGGAAATGGGCA
AGCCAAAATCCTTGGGGTTACCAATCAAAGCCTTGA