Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007879
CDS Infomation

pacid=37469099 polypeptide=PGSC0003DMP400005474 locus=PGSC0003DMG400003047 ID=PGSC0003DMT400007879.v4.03 annot-version=v4.03
Sequence

ATGTTGGCTGGTTGTTCTTCTTCATTGTTGTCACCTAGGCATAGATTAAGGAGTGAAGCA
TCTGCACAGTTTCAAGCTTGTAATTTCCCTTCAATGAGCACACAAAGATTGGACTTGCCA
TGTAGTTTTGCTAGAAAAGATACCTCAAGGTCCCAGTCCATTAGTAGGCCAGTAGGACTT
TCTGTTGAGAAGCCAATTGAAGCAAAGAACAGTACTTGCTCTCTCAAGCAGAACATTCGT
CTACCGCCATCCTCGACAAGTGCTCAGACATCATATGTAGAAGGTAGGAGAGAAAGCAAG
GATGAATTTTGGGAAAAAGGTAGGAGCTTGAAGAGGTATGCTGAGCAGGGATGTATTGAT
GATGAGAGCTGCATGAGCAGAGCTAAGAGGAAAAAAGGTAATAGGAAGTCAGGTGATTGT
TCAGAAGATGGCTATGATCTGAGTTTGAGCCAATTGGGTGGTGGCGATTTCTGGTTACAA
TCAGGTTTCAACGCGGCGCGTTCAGTTCCCCTAATTGCAGGCCTTCATCCACCTCAAGCA
GCACCATTCTCCTTTTCTTGTTCCGGAGAGGAAGAGAGTGTATGTTATGTGCCAAATGAG
GTGATATCACCACCTCTGCCTATGTCAAACAATCCTTGGATTGAATCTGTAGTGACTGAG
ATAACGAGTTTTGGTGACAAGAATGTCTCAACAAGTCAAGATCTTGCCAGAGAGGCCTCA
GTATCAAGTGCTTCTTTAGACAGCCATGGCTTGGTTCTTCGGCCTAATGAGAATCCCGGG
GAGCATGAAATAGGCAATGGTTCTAGGCTACCTAATCCAAATGACAGGGGTGAAGTTGTA
ACAGCACATAATGGGCATAATAACCATAGGGAGGATGATGCAGCTGAGCTGATCAGCTTA
CTTGTGAGTTGTGTTGAAGCAATTGGCTCAAGGAATGTTACTGGTGTTAATCAACTGATA
GCTAGGCTAGGGCAGCTTGCCTCTCCAAGAGGGTCTCCAGTAAGCCGGCTTACTGCTTAC
TTCACCGAAGCTTTAGCTTTGCGTGTTGCAAGGATTTGGCCTCATATCTTTCACATTATA
CCCCCTCGGGACCTTGATCGTTTAGATGATGATAGCAGTACAGCATTGAGGCTTTTGAAT
CAGGTTAGTCCAATTCCAAAGTTCATCCACTTCACATCAAATGAAATTCTGCTTAGAGCT
TTTGAAGGCAAGGACCGGGTTCACATTATTGATTTTGACATTAAGCAAGGGCTGCAGTGG
CCTAGCCTGTTTCAGAGTTTGGCTTCTAGGCCCAACCCTCCTACTCATGTTAGAATTACT
GGTATAGGAGAATCAAAACAGGATCTTGTTGAAACAGGAGATAGACTTGCCGAGTTTGCT
GAGGCGTTGAATCTGGCTTTCGAGTTCCATCCAGTTGTTGACAGGTTGGAAGATGTACGG
CTATGGATGCTTCATGTAAAAGAGGGGGAAAGTGTTGCAGTGAATTGTGTGTTACAGATG
CATAGGCTTCTGTATGATAGTTCTGGGGGGATCCTGAGGGACTTTTTGGGGTTGATTAGA
AGCACAAATCCCACCATTATTCTGATGGCAGAGCAAGAAGCTGAGCACAATGAGCCTAGC
TTGGAAGCAAGACTTGTCAACTCACTCCGATACTATGCTGCTGTCTTTGATTCTATTGGT
TTCAGTCTTCCATTAGACAGTCCTGCCAGGATTAAGATAGAGGAGTTGTTTGCTCGGGAT
ATTAGAAATATCATTGCTTGTGAAGGACGGGATAGGACTGAAAGGCATGAATGTTTTGGG
AAATGGCGGAAGTTGATGGAACAAGGGGGTTTCAGATGCACAGGGATTACAGAAAGGGAA
CTGTTTCAGAGTCAAATGCTGTTGAAGATGTACTCATGTGAAGACTACAGGGTCACAAAG
CAGGGGAACGACGATGCTGCACTTACTCTGAGTTGGTTAGACCAGCCTCTATGCACAGTC
TCCGCGTGGACACCCATTGATGCTGCTGGAAGTTCATCCTCTTATTATCAGCCAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005474
PEP Infomation

pacid=37469099 transcript=PGSC0003DMT400007879 locus=PGSC0003DMG400003047 ID=PGSC0003DMT400007879.v4.03 annot-version=v4.03
Sequence

MLAGCSSSLLSPRHRLRSEASAQFQACNFPSMSTQRLDLPCSFARKDTSRSQSISRPVGL
SVEKPIEAKNSTCSLKQNIRLPPSSTSAQTSYVEGRRESKDEFWEKGRSLKRYAEQGCID
DESCMSRAKRKKGNRKSGDCSEDGYDLSLSQLGGGDFWLQSGFNAARSVPLIAGLHPPQA
APFSFSCSGEEESVCYVPNEVISPPLPMSNNPWIESVVTEITSFGDKNVSTSQDLAREAS
VSSASLDSHGLVLRPNENPGEHEIGNGSRLPNPNDRGEVVTAHNGHNNHREDDAAELISL
LVSCVEAIGSRNVTGVNQLIARLGQLASPRGSPVSRLTAYFTEALALRVARIWPHIFHII
PPRDLDRLDDDSSTALRLLNQVSPIPKFIHFTSNEILLRAFEGKDRVHIIDFDIKQGLQW
PSLFQSLASRPNPPTHVRITGIGESKQDLVETGDRLAEFAEALNLAFEFHPVVDRLEDVR
LWMLHVKEGESVAVNCVLQMHRLLYDSSGGILRDFLGLIRSTNPTIILMAEQEAEHNEPS
LEARLVNSLRYYAAVFDSIGFSLPLDSPARIKIEELFARDIRNIIACEGRDRTERHECFG
KWRKLMEQGGFRCTGITERELFQSQMLLKMYSCEDYRVTKQGNDDAALTLSWLDQPLCTV
SAWTPIDAAGSSSSYYQPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400007879
Transcript Infomation

pacid=37469099 locus=PGSC0003DMG400003047 ID=PGSC0003DMT400007879.v4.03 annot-version=v4.03
Sequence

ATGTTGGCTGGTTGTTCTTCTTCATTGTTGTCACCTAGGCATAGATTAAGGAGTGAAGCA
TCTGCACAGTTTCAAGCTTGTAATTTCCCTTCAATGAGCACACAAAGATTGGACTTGCCA
TGTAGTTTTGCTAGAAAAGATACCTCAAGGTCCCAGTCCATTAGTAGGCCAGTAGGACTT
TCTGTTGAGAAGCCAATTGAAGCAAAGAACAGTACTTGCTCTCTCAAGCAGAACATTCGT
CTACCGCCATCCTCGACAAGTGCTCAGACATCATATGTAGAAGGTAGGAGAGAAAGCAAG
GATGAATTTTGGGAAAAAGGTAGGAGCTTGAAGAGGTATGCTGAGCAGGGATGTATTGAT
GATGAGAGCTGCATGAGCAGAGCTAAGAGGAAAAAAGGTAATAGGAAGTCAGGTGATTGT
TCAGAAGATGGCTATGATCTGAGTTTGAGCCAATTGGGTGGTGGCGATTTCTGGTTACAA
TCAGGTTTCAACGCGGCGCGTTCAGTTCCCCTAATTGCAGGCCTTCATCCACCTCAAGCA
GCACCATTCTCCTTTTCTTGTTCCGGAGAGGAAGAGAGTGTATGTTATGTGCCAAATGAG
GTGATATCACCACCTCTGCCTATGTCAAACAATCCTTGGATTGAATCTGTAGTGACTGAG
ATAACGAGTTTTGGTGACAAGAATGTCTCAACAAGTCAAGATCTTGCCAGAGAGGCCTCA
GTATCAAGTGCTTCTTTAGACAGCCATGGCTTGGTTCTTCGGCCTAATGAGAATCCCGGG
GAGCATGAAATAGGCAATGGTTCTAGGCTACCTAATCCAAATGACAGGGGTGAAGTTGTA
ACAGCACATAATGGGCATAATAACCATAGGGAGGATGATGCAGCTGAGCTGATCAGCTTA
CTTGTGAGTTGTGTTGAAGCAATTGGCTCAAGGAATGTTACTGGTGTTAATCAACTGATA
GCTAGGCTAGGGCAGCTTGCCTCTCCAAGAGGGTCTCCAGTAAGCCGGCTTACTGCTTAC
TTCACCGAAGCTTTAGCTTTGCGTGTTGCAAGGATTTGGCCTCATATCTTTCACATTATA
CCCCCTCGGGACCTTGATCGTTTAGATGATGATAGCAGTACAGCATTGAGGCTTTTGAAT
CAGGTTAGTCCAATTCCAAAGTTCATCCACTTCACATCAAATGAAATTCTGCTTAGAGCT
TTTGAAGGCAAGGACCGGGTTCACATTATTGATTTTGACATTAAGCAAGGGCTGCAGTGG
CCTAGCCTGTTTCAGAGTTTGGCTTCTAGGCCCAACCCTCCTACTCATGTTAGAATTACT
GGTATAGGAGAATCAAAACAGGATCTTGTTGAAACAGGAGATAGACTTGCCGAGTTTGCT
GAGGCGTTGAATCTGGCTTTCGAGTTCCATCCAGTTGTTGACAGGTTGGAAGATGTACGG
CTATGGATGCTTCATGTAAAAGAGGGGGAAAGTGTTGCAGTGAATTGTGTGTTACAGATG
CATAGGCTTCTGTATGATAGTTCTGGGGGGATCCTGAGGGACTTTTTGGGGTTGATTAGA
AGCACAAATCCCACCATTATTCTGATGGCAGAGCAAGAAGCTGAGCACAATGAGCCTAGC
TTGGAAGCAAGACTTGTCAACTCACTCCGATACTATGCTGCTGTCTTTGATTCTATTGGT
TTCAGTCTTCCATTAGACAGTCCTGCCAGGATTAAGATAGAGGAGTTGTTTGCTCGGGAT
ATTAGAAATATCATTGCTTGTGAAGGACGGGATAGGACTGAAAGGCATGAATGTTTTGGG
AAATGGCGGAAGTTGATGGAACAAGGGGGTTTCAGATGCACAGGGATTACAGAAAGGGAA
CTGTTTCAGAGTCAAATGCTGTTGAAGATGTACTCATGTGAAGACTACAGGGTCACAAAG
CAGGGGAACGACGATGCTGCACTTACTCTGAGTTGGTTAGACCAGCCTCTATGCACAGTC
TCCGCGTGGACACCCATTGATGCTGCTGGAAGTTCATCCTCTTATTATCAGCCAAGTTGA