Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007864
CDS Infomation

pacid=37471417 polypeptide=PGSC0003DMP400005462 locus=PGSC0003DMG400003039 ID=PGSC0003DMT400007864.v4.03 annot-version=v4.03
Sequence

ATGCCTGCTTTAGTGCTAACAAGGGCCCTCTTGTTAATTGGGGATTCTTTAGCTTTCAGA
AAAGTTACACAGTTTACACGGATAGCTCCATCTCAAGGCAATGTTCGATTTTTAAGTAGC
AGTGGATCCCTCACTCTAGCTAGCCTTGGATTGAAGAGTGAAGTTAAGACAGTAAGTGCA
AATGAGAAAAATAAGCTCCAGCAGGGAATTTCAACAATTGAGGTCCCCAAGAGTAGAGAG
AAGAAAAGAGTTAGTGGCAATAAACAAGGATTGGTTAAGGAGAAAAATCCAGTAGATATA
ATGACCGCACCATTTGCTGCGAAGTCATTTTCAGAACTTGGCATTCCACCTTTGTTGGTC
GAAAGACTAGAGAAGGAAGGCTTTACGATTCCGACTGATGTTCAAGCTGCTGCAGTTCCA
ACTGTTCTTAAAAATCATGATGTTGTGATCCAGTCCTACACAGGTTCAGGAAAAACATTA
GCTTATCTCCTACCCATACTGTCTCGAGTCGGTCCGTTGAAGGAAGAACTTTCAGATGGC
TATGAAACTGGGAAGAAAATAGACATCGAAGCAGTTATAGTAGCTCCTTCGAGGGAACTT
GGCATGCAGATTGTCAGGGAAGTTGAAAAGCTATTAGGACCAGCGAATAAGAAACTAGTC
CAGCAGCTTGTAGGGGGTGCAAACCGATCTAGACAGGAGGATGCTCTGAGGAAGAACAAG
CCTGCCATTGTAGTGGGGACACCTGGGCGGATAGCAGAGATTAGTGCAGCTGGAAAGCTT
CCTACCCATGGTTGTCGTTTCTTGGTATTGGATGAAATTGATCAACTCCTTGCATTCACT
TTCCGGGAGGACATGAAGCGTATATTAGACCATGTGGGGAGAAGACCTGGTGCACGCGGA
GGAGAGTCAAACAGTCCACTTGTCAAGCGAGCTGCACGTCAGACTATCATGGTGTCTGCA
ACAGTGCCTTTTTCAGTTATAAGAGCAGCAAGAAGTTGGGGTTGTGATCCACTTCTCATC
CAAGCCAATAAAGTTGTTCCAATCGAGTCTGTCACTCCTGCTGGATCTGTTAATATACCG
GGAACACCTTCTACTACTGATTCAAGCTCAAATGTACAACCTATGCCTGACGTTCAGAGC
TTACCCCCTAACTTGCAGCATTATTACACTATTACTAGGATACAGCACAAAGTTGATATG
TTAAGAAGGTGTGTGCATGCTCTGGATGCCAAATGTGTAATAGCTTTTATGAACCACACA
AAACAACTGAAAGATGCCGTCTTTAAACTAGAAGCTCGTGGTATGAATGCTGCAGAATTA
CATGGTGATCTCAGCAAACTTGTAAGATCAACAATTTTAAAGAAGTTCAGAAATGGGGAG
ATCAGGGTGCTGCTAACGAATGAGCTTTCAGCTAGAGGCTTGGATTTACCTGAATGTGAT
CTTGTAGTTAATCTGGGGTTACCTACGGACTCAGTTCATTATGCTCATCGAGCTGGTCGT
ACGGGCAGGCTTGGCCGCAAGGGCACGGTAGTAACCATATGTGAAGAGTCAGAAGTCTTT
GTGGTAAAAAAGCTACAGAAGCAGCTTTCCCTCTCCATCCAGGCTTGTGAATTTTCTGAG
GGAAATCTTGTCATTATAGAAGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005462
PEP Infomation

pacid=37471417 transcript=PGSC0003DMT400007864 locus=PGSC0003DMG400003039 ID=PGSC0003DMT400007864.v4.03 annot-version=v4.03
Sequence

MPALVLTRALLLIGDSLAFRKVTQFTRIAPSQGNVRFLSSSGSLTLASLGLKSEVKTVSA
NEKNKLQQGISTIEVPKSREKKRVSGNKQGLVKEKNPVDIMTAPFAAKSFSELGIPPLLV
ERLEKEGFTIPTDVQAAAVPTVLKNHDVVIQSYTGSGKTLAYLLPILSRVGPLKEELSDG
YETGKKIDIEAVIVAPSRELGMQIVREVEKLLGPANKKLVQQLVGGANRSRQEDALRKNK
PAIVVGTPGRIAEISAAGKLPTHGCRFLVLDEIDQLLAFTFREDMKRILDHVGRRPGARG
GESNSPLVKRAARQTIMVSATVPFSVIRAARSWGCDPLLIQANKVVPIESVTPAGSVNIP
GTPSTTDSSSNVQPMPDVQSLPPNLQHYYTITRIQHKVDMLRRCVHALDAKCVIAFMNHT
KQLKDAVFKLEARGMNAAELHGDLSKLVRSTILKKFRNGEIRVLLTNELSARGLDLPECD
LVVNLGLPTDSVHYAHRAGRTGRLGRKGTVVTICEESEVFVVKKLQKQLSLSIQACEFSE
GNLVIIED*

Transcript Sequence

Transcript ID

PGSC0003DMT400007864
Transcript Infomation

pacid=37471417 locus=PGSC0003DMG400003039 ID=PGSC0003DMT400007864.v4.03 annot-version=v4.03
Sequence

ATGCCTGCTTTAGTGCTAACAAGGGCCCTCTTGTTAATTGGGGATTCTTTAGCTTTCAGA
AAAGTTACACAGTTTACACGGATAGCTCCATCTCAAGGCAATGTTCGATTTTTAAGTAGC
AGTGGATCCCTCACTCTAGCTAGCCTTGGATTGAAGAGTGAAGTTAAGACAGTAAGTGCA
AATGAGAAAAATAAGCTCCAGCAGGGAATTTCAACAATTGAGGTCCCCAAGAGTAGAGAG
AAGAAAAGAGTTAGTGGCAATAAACAAGGATTGGTTAAGGAGAAAAATCCAGTAGATATA
ATGACCGCACCATTTGCTGCGAAGTCATTTTCAGAACTTGGCATTCCACCTTTGTTGGTC
GAAAGACTAGAGAAGGAAGGCTTTACGATTCCGACTGATGTTCAAGCTGCTGCAGTTCCA
ACTGTTCTTAAAAATCATGATGTTGTGATCCAGTCCTACACAGGTTCAGGAAAAACATTA
GCTTATCTCCTACCCATACTGTCTCGAGTCGGTCCGTTGAAGGAAGAACTTTCAGATGGC
TATGAAACTGGGAAGAAAATAGACATCGAAGCAGTTATAGTAGCTCCTTCGAGGGAACTT
GGCATGCAGATTGTCAGGGAAGTTGAAAAGCTATTAGGACCAGCGAATAAGAAACTAGTC
CAGCAGCTTGTAGGGGGTGCAAACCGATCTAGACAGGAGGATGCTCTGAGGAAGAACAAG
CCTGCCATTGTAGTGGGGACACCTGGGCGGATAGCAGAGATTAGTGCAGCTGGAAAGCTT
CCTACCCATGGTTGTCGTTTCTTGGTATTGGATGAAATTGATCAACTCCTTGCATTCACT
TTCCGGGAGGACATGAAGCGTATATTAGACCATGTGGGGAGAAGACCTGGTGCACGCGGA
GGAGAGTCAAACAGTCCACTTGTCAAGCGAGCTGCACGTCAGACTATCATGGTGTCTGCA
ACAGTGCCTTTTTCAGTTATAAGAGCAGCAAGAAGTTGGGGTTGTGATCCACTTCTCATC
CAAGCCAATAAAGTTGTTCCAATCGAGTCTGTCACTCCTGCTGGATCTGTTAATATACCG
GGAACACCTTCTACTACTGATTCAAGCTCAAATGTACAACCTATGCCTGACGTTCAGAGC
TTACCCCCTAACTTGCAGCATTATTACACTATTACTAGGATACAGCACAAAGTTGATATG
TTAAGAAGGTGTGTGCATGCTCTGGATGCCAAATGTGTAATAGCTTTTATGAACCACACA
AAACAACTGAAAGATGCCGTCTTTAAACTAGAAGCTCGTGGTATGAATGCTGCAGAATTA
CATGGTGATCTCAGCAAACTTGTAAGATCAACAATTTTAAAGAAGTTCAGAAATGGGGAG
ATCAGGGTGCTGCTAACGAATGAGCTTTCAGCTAGAGGCTTGGATTTACCTGAATGTGAT
CTTGTAGTTAATCTGGGGTTACCTACGGACTCAGTTCATTATGCTCATCGAGCTGGTCGT
ACGGGCAGGCTTGGCCGCAAGGGCACGGTAGTAACCATATGTGAAGAGTCAGAAGTCTTT
GTGGTAAAAAAGCTACAGAAGCAGCTTTCCCTCTCCATCCAGGCTTGTGAATTTTCTGAG
GGAAATCTTGTCATTATAGAAGATTAA