Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007855
CDS Infomation

pacid=37469595 polypeptide=PGSC0003DMP400005455 locus=PGSC0003DMG400003036 ID=PGSC0003DMT400007855.v4.03 annot-version=v4.03
Sequence

ATGGGCAAAGCATCCAAATGGTTTAGAGGTCTTCTTGGCCTAAAAAAACAGGACCCATCA
TCTTCCTCTAACCAAAATCCAAAACCCACAAAGAAAAAATGGAGCTTTGTTAAATCTTAC
AGAGAAAAAGACTCCAACTTTGTTAAGGGTACTGATAAAGAATCATCAAACTATGGTCGT
GTTGTGTCAAATTCACTTCAAAACGGTGCTGTTGGATGTAGCGTTGATTCGTCAAATCGA
GCGATTGCGGTGGCGGAAGCAACGGCCGTCGTAGCCGAAGCTGCTATCGCCGCCGCTCAA
GCCGCCGCTGCGGGGGTGAAGCTTACTAATAGTGGTAGAGCTACTACTACCACAACTAAT
GGTGGTGCCGCTGCTGTTACGATGTGGAACGGCATTTCTCTCAGCTCCTCTGCGGTGGTT
GGTAAAAAAAAGGGAGCCGCCGCGGGCAACCGTGAAAATTGGGCCGCCGTTGTTATTCAA
TCACTTTTCCGAGCTTATTTGTCGAGGAGAGCTTTACGAGCGTTGAAGGGACTGGTGAAG
CTTCAAGCACTGGTGAGAGGTCACATTATTAGGCAACAGACTGCTGATTATCTACGGCAA
ATGCAAGCAATATCCAGAGCTCAGTCAAGGGCTCGTGCTGGACGATCTCAGGTCTCAGGA
TCCCCTCATTCAAGCACCAAGTCCGTTCAATTTCTTCATGATCCCACAACTCCAGAGAAA
TTCGAGCATGTTATCCGTGCAAGGAGCTTGAAGCATGATGAAACGTCTATGCTCAAGAGG
AATACCTCGAAATCAAATTGGAAGGCGATTGATTCGGAAAAGGCACGAATTAGACCTCAA
GGATCTTCTGCAAGAACTAGTTCTATTGATGACGAAAAGAGTGACAAGATCCTTGAGATA
GATACCGGGAAACCACATGTTACGCCTAAACAAAGGAACCTCTTCCACTCCTCACATCTT
AGCCTGAACTCTGACCAATACAGCTATAGCTTAACAACGTCGAAGGAATCAACAGCTCAT
CAAACGGTTCCTAGTCCATCGTCCTGTGGAAATCAACCCCTTAGTCCCCTGAAGTTCAAT
GAGGATCTTGATGAAGCTTGCTTCTGCACTGCTGACAATAGCCCTCAGTTTTACTCTGCT
TCATCAAAGGGCGGTAGTTCCAAGAGAGGACCGTTTACACCAACTAAGAGCGACGGTTCA
AGAAGCTATATGAGTGGTTACTCTGATCATCCCAGCTACATGTCCTACACAGAGTCCTCC
AAGGCTAAGGTACGTTCAATGAGCGCACCTAAACAAAGGCCTCACTACGAGAGATCAAGT
TCAACAAAAAGGTACTCGATTCACGGGTGCAGTGAGTCAAGAAACAACTCACAAAAGGGT
TCTTTTTATCCCAACTTCACTGGTAAAGCTTATCCCGGTTCTGGTCGTTTGGACCGGCTT
GGGATGCCTGTTATCAGGGCAGATCCATCTGGATTCAGTGGTGGTCTTCGACACAGATAT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400005455
PEP Infomation

pacid=37469595 transcript=PGSC0003DMT400007855 locus=PGSC0003DMG400003036 ID=PGSC0003DMT400007855.v4.03 annot-version=v4.03
Sequence

MGKASKWFRGLLGLKKQDPSSSSNQNPKPTKKKWSFVKSYREKDSNFVKGTDKESSNYGR
VVSNSLQNGAVGCSVDSSNRAIAVAEATAVVAEAAIAAAQAAAAGVKLTNSGRATTTTTN
GGAAAVTMWNGISLSSSAVVGKKKGAAAGNRENWAAVVIQSLFRAYLSRRALRALKGLVK
LQALVRGHIIRQQTADYLRQMQAISRAQSRARAGRSQVSGSPHSSTKSVQFLHDPTTPEK
FEHVIRARSLKHDETSMLKRNTSKSNWKAIDSEKARIRPQGSSARTSSIDDEKSDKILEI
DTGKPHVTPKQRNLFHSSHLSLNSDQYSYSLTTSKESTAHQTVPSPSSCGNQPLSPLKFN
EDLDEACFCTADNSPQFYSASSKGGSSKRGPFTPTKSDGSRSYMSGYSDHPSYMSYTESS
KAKVRSMSAPKQRPHYERSSSTKRYSIHGCSESRNNSQKGSFYPNFTGKAYPGSGRLDRL
GMPVIRADPSGFSGGLRHRY*

Transcript Sequence

Transcript ID

PGSC0003DMT400007855
Transcript Infomation

pacid=37469595 locus=PGSC0003DMG400003036 ID=PGSC0003DMT400007855.v4.03 annot-version=v4.03
Sequence

ATGGGCAAAGCATCCAAATGGTTTAGAGGTCTTCTTGGCCTAAAAAAACAGGACCCATCA
TCTTCCTCTAACCAAAATCCAAAACCCACAAAGAAAAAATGGAGCTTTGTTAAATCTTAC
AGAGAAAAAGACTCCAACTTTGTTAAGGGTACTGATAAAGAATCATCAAACTATGGTCGT
GTTGTGTCAAATTCACTTCAAAACGGTGCTGTTGGATGTAGCGTTGATTCGTCAAATCGA
GCGATTGCGGTGGCGGAAGCAACGGCCGTCGTAGCCGAAGCTGCTATCGCCGCCGCTCAA
GCCGCCGCTGCGGGGGTGAAGCTTACTAATAGTGGTAGAGCTACTACTACCACAACTAAT
GGTGGTGCCGCTGCTGTTACGATGTGGAACGGCATTTCTCTCAGCTCCTCTGCGGTGGTT
GGTAAAAAAAAGGGAGCCGCCGCGGGCAACCGTGAAAATTGGGCCGCCGTTGTTATTCAA
TCACTTTTCCGAGCTTATTTGTCGAGGAGAGCTTTACGAGCGTTGAAGGGACTGGTGAAG
CTTCAAGCACTGGTGAGAGGTCACATTATTAGGCAACAGACTGCTGATTATCTACGGCAA
ATGCAAGCAATATCCAGAGCTCAGTCAAGGGCTCGTGCTGGACGATCTCAGGTCTCAGGA
TCCCCTCATTCAAGCACCAAGTCCGTTCAATTTCTTCATGATCCCACAACTCCAGAGAAA
TTCGAGCATGTTATCCGTGCAAGGAGCTTGAAGCATGATGAAACGTCTATGCTCAAGAGG
AATACCTCGAAATCAAATTGGAAGGCGATTGATTCGGAAAAGGCACGAATTAGACCTCAA
GGATCTTCTGCAAGAACTAGTTCTATTGATGACGAAAAGAGTGACAAGATCCTTGAGATA
GATACCGGGAAACCACATGTTACGCCTAAACAAAGGAACCTCTTCCACTCCTCACATCTT
AGCCTGAACTCTGACCAATACAGCTATAGCTTAACAACGTCGAAGGAATCAACAGCTCAT
CAAACGGTTCCTAGTCCATCGTCCTGTGGAAATCAACCCCTTAGTCCCCTGAAGTTCAAT
GAGGATCTTGATGAAGCTTGCTTCTGCACTGCTGACAATAGCCCTCAGTTTTACTCTGCT
TCATCAAAGGGCGGTAGTTCCAAGAGAGGACCGTTTACACCAACTAAGAGCGACGGTTCA
AGAAGCTATATGAGTGGTTACTCTGATCATCCCAGCTACATGTCCTACACAGAGTCCTCC
AAGGCTAAGGTACGTTCAATGAGCGCACCTAAACAAAGGCCTCACTACGAGAGATCAAGT
TCAACAAAAAGGTACTCGATTCACGGGTGCAGTGAGTCAAGAAACAACTCACAAAAGGGT
TCTTTTTATCCCAACTTCACTGGTAAAGCTTATCCCGGTTCTGGTCGTTTGGACCGGCTT
GGGATGCCTGTTATCAGGGCAGATCCATCTGGATTCAGTGGTGGTCTTCGACACAGATAT
TAA