Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007797
CDS Infomation

pacid=37464358 polypeptide=PGSC0003DMP400005423 locus=PGSC0003DMG400003011 ID=PGSC0003DMT400007797.v4.03 annot-version=v4.03
Sequence

ATGGCTCGAATTTTCTGCTACAAGAATCTCTCTATTGCTCTTCAATTGAAAAGGCCAACG
ACCCATTTTCTTCCTTCTTCTCTCCATTCTCAATCCTCAGCTCCCATAGACAAAGAAGTT
GAAACCCTTTACCGCATCATAACAGTAACACAGTCACCAGAAGGACTGAAACAAGCACTG
AAATCATCACAAATCAAACTATCAAACGATTTAATCGACAAAGTTCTCAAAAGGGTACGT
TTTTCTCATTCAAACCCATTACAAGCTTTAGAGTTCTTTAAATATGCAGATAAGCGAAAA
GGGTTTTATCATACTGGGTTTTCTTTAGATACCATTTTGTATGTAATTGGTAGGAATCGT
AAATTTGATAAGATTTGGGAGGTTTTAGTGGAAATGAAGAGAAAAGATCAATCTTTGATA
ACACCCAGAACAGTTCAAGTTGTTTTAGGTAGAGTTGCTAAGGTTTGCTCTGTTAGGGAA
ACTGTTGAGTCTTTTTGGGGTTTTAAGAGACTGTTGAATGAGTTTGGTGTTGATTGTTTT
AATGCATTGTTAAGGGCTTTGTGTCAGGAGAAAAGTATGAGTGATGCTAGGAATGTGTAT
CATAGGTTGAAGTACAAGTTTAGGCCAAATAACCAGACTTTTAATATACTTTTGTCTGGT
TGGAAGTCGTCCGAGGATGCGGAGGTTTTCTTTAAGGAGATGAGGGATTTGGGAGTTGAA
CCGGATGTTGTTTCATTTAATTGTTTGGTGGATGTGTATTGTAAAGGGAGAGAGATGGAG
AAGGCGTTTACGGTGGTGGAGGAGATGAGAGAGAAGGATATTACTCCTGATGTGATAACT
TATACAAGTTTAATTGGAGGGTTGGGGTTGGCTGGACAACCTGATAAGGCGAGGCACATT
TTGAAGGAGATGAGGGAATATGGATGTTATCCGGATGTGGCTGCTTATAATGCTGCGATT
AGGAACTTCTGCATTGCGAAGAGGATCGGGGATGCATACAGTTTGATGGATGAGATGGTT
AGAAATGGTTTGAGCCCCAATGCCACTACTTATAATGTGTTCTTAAGGTCATTTTTTTGG
ATAAATGATTTGAAAAGTTCGTGGACTTTGTACCAGAGGATGAAGGAGACTGGGTGCTTA
CCGAGTACACAGTCGTGTATGTTTCTGATCAGGTTGAGCAGGAGACATGAGAAAGTGGAG
ATGGCACTTGAGCTGTGGGATGACATGATGGAGAGAGGATTTGGCTCATATATTTTGGTC
TCTGATGTTTTGTTTGATTTGCTCTGTGATCTGGGAAAGTTGGCGGAGGCAGAAAGATGT
TTCTTGCAAATGGTAAATAAAGGGCAAAAACCAAGTAATGTTTCTTTTAGGAGGATCAAG
GTGCTTATGGAATTGGCTAATAAACAGGAGACTCTTAAGCTTTTGTCAGAAAAGATGGCT
GCTTTTGGTTCCTCCACACAACTGATCCAACATGATAAAGCGGAATATGAACAATCAAGT
TCCGACTTTGTAACCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005423
PEP Infomation

pacid=37464358 transcript=PGSC0003DMT400007797 locus=PGSC0003DMG400003011 ID=PGSC0003DMT400007797.v4.03 annot-version=v4.03
Sequence

MARIFCYKNLSIALQLKRPTTHFLPSSLHSQSSAPIDKEVETLYRIITVTQSPEGLKQAL
KSSQIKLSNDLIDKVLKRVRFSHSNPLQALEFFKYADKRKGFYHTGFSLDTILYVIGRNR
KFDKIWEVLVEMKRKDQSLITPRTVQVVLGRVAKVCSVRETVESFWGFKRLLNEFGVDCF
NALLRALCQEKSMSDARNVYHRLKYKFRPNNQTFNILLSGWKSSEDAEVFFKEMRDLGVE
PDVVSFNCLVDVYCKGREMEKAFTVVEEMREKDITPDVITYTSLIGGLGLAGQPDKARHI
LKEMREYGCYPDVAAYNAAIRNFCIAKRIGDAYSLMDEMVRNGLSPNATTYNVFLRSFFW
INDLKSSWTLYQRMKETGCLPSTQSCMFLIRLSRRHEKVEMALELWDDMMERGFGSYILV
SDVLFDLLCDLGKLAEAERCFLQMVNKGQKPSNVSFRRIKVLMELANKQETLKLLSEKMA
AFGSSTQLIQHDKAEYEQSSSDFVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400007797
Transcript Infomation

pacid=37464358 locus=PGSC0003DMG400003011 ID=PGSC0003DMT400007797.v4.03 annot-version=v4.03
Sequence

ATGGCTCGAATTTTCTGCTACAAGAATCTCTCTATTGCTCTTCAATTGAAAAGGCCAACG
ACCCATTTTCTTCCTTCTTCTCTCCATTCTCAATCCTCAGCTCCCATAGACAAAGAAGTT
GAAACCCTTTACCGCATCATAACAGTAACACAGTCACCAGAAGGACTGAAACAAGCACTG
AAATCATCACAAATCAAACTATCAAACGATTTAATCGACAAAGTTCTCAAAAGGGTACGT
TTTTCTCATTCAAACCCATTACAAGCTTTAGAGTTCTTTAAATATGCAGATAAGCGAAAA
GGGTTTTATCATACTGGGTTTTCTTTAGATACCATTTTGTATGTAATTGGTAGGAATCGT
AAATTTGATAAGATTTGGGAGGTTTTAGTGGAAATGAAGAGAAAAGATCAATCTTTGATA
ACACCCAGAACAGTTCAAGTTGTTTTAGGTAGAGTTGCTAAGGTTTGCTCTGTTAGGGAA
ACTGTTGAGTCTTTTTGGGGTTTTAAGAGACTGTTGAATGAGTTTGGTGTTGATTGTTTT
AATGCATTGTTAAGGGCTTTGTGTCAGGAGAAAAGTATGAGTGATGCTAGGAATGTGTAT
CATAGGTTGAAGTACAAGTTTAGGCCAAATAACCAGACTTTTAATATACTTTTGTCTGGT
TGGAAGTCGTCCGAGGATGCGGAGGTTTTCTTTAAGGAGATGAGGGATTTGGGAGTTGAA
CCGGATGTTGTTTCATTTAATTGTTTGGTGGATGTGTATTGTAAAGGGAGAGAGATGGAG
AAGGCGTTTACGGTGGTGGAGGAGATGAGAGAGAAGGATATTACTCCTGATGTGATAACT
TATACAAGTTTAATTGGAGGGTTGGGGTTGGCTGGACAACCTGATAAGGCGAGGCACATT
TTGAAGGAGATGAGGGAATATGGATGTTATCCGGATGTGGCTGCTTATAATGCTGCGATT
AGGAACTTCTGCATTGCGAAGAGGATCGGGGATGCATACAGTTTGATGGATGAGATGGTT
AGAAATGGTTTGAGCCCCAATGCCACTACTTATAATGTGTTCTTAAGGTCATTTTTTTGG
ATAAATGATTTGAAAAGTTCGTGGACTTTGTACCAGAGGATGAAGGAGACTGGGTGCTTA
CCGAGTACACAGTCGTGTATGTTTCTGATCAGGTTGAGCAGGAGACATGAGAAAGTGGAG
ATGGCACTTGAGCTGTGGGATGACATGATGGAGAGAGGATTTGGCTCATATATTTTGGTC
TCTGATGTTTTGTTTGATTTGCTCTGTGATCTGGGAAAGTTGGCGGAGGCAGAAAGATGT
TTCTTGCAAATGGTAAATAAAGGGCAAAAACCAAGTAATGTTTCTTTTAGGAGGATCAAG
GTGCTTATGGAATTGGCTAATAAACAGGAGACTCTTAAGCTTTTGTCAGAAAAGATGGCT
GCTTTTGGTTCCTCCACACAACTGATCCAACATGATAAAGCGGAATATGAACAATCAAGT
TCCGACTTTGTAACCTGA