Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007765
CDS Infomation

pacid=37466357 polypeptide=PGSC0003DMP400005399 locus=PGSC0003DMG400003001 ID=PGSC0003DMT400007765.v4.03 annot-version=v4.03
Sequence

ATGGGTAAAGGAGAAAAAACTTCGTTAGGTAGGGCACTGGTGAAGCACCATAATCAGATG
ATTCAGCAATCGAAAGAGAAGGGGCAAGTTTATAGGAATCATAATAAGAAGGTTCTGGAA
TCTGTAACTGAAGTTACTGATTTAGAAGCTGTAATAGAACAGACAGATGAAGCTCACCGC
CTCTATTCTGACCTTAATCCTCCTGTTAATCTTCTCGTCAATCTGGACTCTGGCTCTAGT
ACTGGTGATATGGGACCTGAAGAAAGATTGAAGCAGCAGAAGAAAGAGGAGGCTTTGCAT
GCTAGTAGTCTTCGTGTTCCACGCAGGCCCCCATGGAATACTAGAATGTCAGTAGAAGAG
CTTGATATCAATGAAAGACAAGCTTTTCTAGCTTGGCGACGCAATCTTGCAAGGCTTGAA
GAGAATGAGAAACTGGTTCTCACCCCTTTTGAAAAGAACCTGGATATCTGGAGACAGCTT
TGGAGAGTTGTTGAGCGTAGTGATCTGCTTGTAATGGTTGTTGATGCACGAGACCCACTT
TTTTATCGGTGTCCTGATCTTGAGGCTTATGCACTAGAAGTTGACCAACACAAAAAAACA
ATGCTTCTTGTTAACAAAGCAGATCTTTTACCCATTTCTATCAGAAAGAAATGGGCTGAA
TACTTCCACCAGCAAGGGATTCTTTTTCTGTTCTGGTCAGCTAAAGCTGCCTCTGCTGCT
CTCACTGCTTCAGAAGTACCAACGAGCTCTCAGGAGGCAGGTAATGCTGATACGAAAATA
TTAGGCAGGGAGGAGCTATTGGCCCGTTTACAGTCTGCAGCAGAGGAGATAGTTTTGACT
AGGAATAGGTCAGCTTGTCATGCTGATGAGAACTTGGCAGCAGATGTTCAATCTAGAAGT
GTGATGGTGGGGTTTGTGGGGTATCCTAATGTTGGGAAAAGTTCAACCATTAATGCTTTG
GTGGGGGAAAAACGAGCTGGTGTGACATCTACTCCCGGGAAGACGAAGCATTTCCAAACA
CTTGTGATTTCTCCTAAACTTACTCTATGTGATTGCCCGGGTTTAGTGTTTCCATCATTC
ACAAGTTCGAGATATGAGATGATTGCATGTGGTGTTTTGCCAATTGACCGGATCACTGAG
CATCGAGAGGCTGTACAGGTGGTGGCAAATCGAGTTCCTAGAAAAGTTATCGAGGATGTC
TACAACATATCTCTGCCGAAACCAAAGCCATATGAACCACAGTCTCGCCCACCTACTGCT
GCAGAACTTTTAAGAGCATACTGTGCCTCTCGTGGTTATGTTGCTTCAAGCGGATTGCCT
GATGAAACAAGAGCAACACGTCAGATGTTGAAGGATTATGTTGATGGGAAGCTGCCTCAC
TTTGAAATGCCTCCGGGAGAATTAGACGATGAAGCTAGTGAAGAGGAGGATGAAGTTGTT
ACAGAGGATGCTGATGGACCTATAATGTCTGATTCTGATTCTGATGAGGATGAGGATGAG
GATGATGATGATGAGGACATTAATGCACATCTAGATCATGTTCTGAGTGATTTAAGTACA
TTTGATATGGCCAATGGACTTGCTTCTAACCAAGCAGCTCGTAAAAAGAAGCCCTCAACT
GCTCCCCATAAACAACACAAGAAAACACAGAGAAAGAAAGACCGTTCATGGAGAGTCCAG
AATGGTGAAGGTGATGGGATGCCAGTAGTAAGAGTCTTCAGGAAAGCAGCAAACACTGGA
CCTGTAAACGTTCGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400005399
PEP Infomation

pacid=37466357 transcript=PGSC0003DMT400007765 locus=PGSC0003DMG400003001 ID=PGSC0003DMT400007765.v4.03 annot-version=v4.03
Sequence

MGKGEKTSLGRALVKHHNQMIQQSKEKGQVYRNHNKKVLESVTEVTDLEAVIEQTDEAHR
LYSDLNPPVNLLVNLDSGSSTGDMGPEERLKQQKKEEALHASSLRVPRRPPWNTRMSVEE
LDINERQAFLAWRRNLARLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDARDPL
FYRCPDLEAYALEVDQHKKTMLLVNKADLLPISIRKKWAEYFHQQGILFLFWSAKAASAA
LTASEVPTSSQEAGNADTKILGREELLARLQSAAEEIVLTRNRSACHADENLAADVQSRS
VMVGFVGYPNVGKSSTINALVGEKRAGVTSTPGKTKHFQTLVISPKLTLCDCPGLVFPSF
TSSRYEMIACGVLPIDRITEHREAVQVVANRVPRKVIEDVYNISLPKPKPYEPQSRPPTA
AELLRAYCASRGYVASSGLPDETRATRQMLKDYVDGKLPHFEMPPGELDDEASEEEDEVV
TEDADGPIMSDSDSDEDEDEDDDDEDINAHLDHVLSDLSTFDMANGLASNQAARKKKPST
APHKQHKKTQRKKDRSWRVQNGEGDGMPVVRVFRKAANTGPVNVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400007765
Transcript Infomation

pacid=37466357 locus=PGSC0003DMG400003001 ID=PGSC0003DMT400007765.v4.03 annot-version=v4.03
Sequence

ATGGGTAAAGGAGAAAAAACTTCGTTAGGTAGGGCACTGGTGAAGCACCATAATCAGATG
ATTCAGCAATCGAAAGAGAAGGGGCAAGTTTATAGGAATCATAATAAGAAGGTTCTGGAA
TCTGTAACTGAAGTTACTGATTTAGAAGCTGTAATAGAACAGACAGATGAAGCTCACCGC
CTCTATTCTGACCTTAATCCTCCTGTTAATCTTCTCGTCAATCTGGACTCTGGCTCTAGT
ACTGGTGATATGGGACCTGAAGAAAGATTGAAGCAGCAGAAGAAAGAGGAGGCTTTGCAT
GCTAGTAGTCTTCGTGTTCCACGCAGGCCCCCATGGAATACTAGAATGTCAGTAGAAGAG
CTTGATATCAATGAAAGACAAGCTTTTCTAGCTTGGCGACGCAATCTTGCAAGGCTTGAA
GAGAATGAGAAACTGGTTCTCACCCCTTTTGAAAAGAACCTGGATATCTGGAGACAGCTT
TGGAGAGTTGTTGAGCGTAGTGATCTGCTTGTAATGGTTGTTGATGCACGAGACCCACTT
TTTTATCGGTGTCCTGATCTTGAGGCTTATGCACTAGAAGTTGACCAACACAAAAAAACA
ATGCTTCTTGTTAACAAAGCAGATCTTTTACCCATTTCTATCAGAAAGAAATGGGCTGAA
TACTTCCACCAGCAAGGGATTCTTTTTCTGTTCTGGTCAGCTAAAGCTGCCTCTGCTGCT
CTCACTGCTTCAGAAGTACCAACGAGCTCTCAGGAGGCAGGTAATGCTGATACGAAAATA
TTAGGCAGGGAGGAGCTATTGGCCCGTTTACAGTCTGCAGCAGAGGAGATAGTTTTGACT
AGGAATAGGTCAGCTTGTCATGCTGATGAGAACTTGGCAGCAGATGTTCAATCTAGAAGT
GTGATGGTGGGGTTTGTGGGGTATCCTAATGTTGGGAAAAGTTCAACCATTAATGCTTTG
GTGGGGGAAAAACGAGCTGGTGTGACATCTACTCCCGGGAAGACGAAGCATTTCCAAACA
CTTGTGATTTCTCCTAAACTTACTCTATGTGATTGCCCGGGTTTAGTGTTTCCATCATTC
ACAAGTTCGAGATATGAGATGATTGCATGTGGTGTTTTGCCAATTGACCGGATCACTGAG
CATCGAGAGGCTGTACAGGTGGTGGCAAATCGAGTTCCTAGAAAAGTTATCGAGGATGTC
TACAACATATCTCTGCCGAAACCAAAGCCATATGAACCACAGTCTCGCCCACCTACTGCT
GCAGAACTTTTAAGAGCATACTGTGCCTCTCGTGGTTATGTTGCTTCAAGCGGATTGCCT
GATGAAACAAGAGCAACACGTCAGATGTTGAAGGATTATGTTGATGGGAAGCTGCCTCAC
TTTGAAATGCCTCCGGGAGAATTAGACGATGAAGCTAGTGAAGAGGAGGATGAAGTTGTT
ACAGAGGATGCTGATGGACCTATAATGTCTGATTCTGATTCTGATGAGGATGAGGATGAG
GATGATGATGATGAGGACATTAATGCACATCTAGATCATGTTCTGAGTGATTTAAGTACA
TTTGATATGGCCAATGGACTTGCTTCTAACCAAGCAGCTCGTAAAAAGAAGCCCTCAACT
GCTCCCCATAAACAACACAAGAAAACACAGAGAAAGAAAGACCGTTCATGGAGAGTCCAG
AATGGTGAAGGTGATGGGATGCCAGTAGTAAGAGTCTTCAGGAAAGCAGCAAACACTGGA
CCTGTAAACGTTCGGTAG