Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007735
CDS Infomation

pacid=37465360 polypeptide=PGSC0003DMP400005371 locus=PGSC0003DMG400002992 ID=PGSC0003DMT400007735.v4.03 annot-version=v4.03
Sequence

ATGGGGGATTCTGATGGTGAGAAGATTCGGAACATATGTATTCTTGCTCATGTGGATCAT
GGGAAGACAACATTGGCTGACCATCTGATTGCTTCATCTGGTGGTGGTGTACTCCATCCG
AAGCAAGCGGGTAAGCTTAGGTTTATGGATTATTTAGATGAGGAACAGAGGAGGGCGATA
ACTATGAAGAGTTCTTCTATAGGTCTTAAATATAAGGAACATTCGATTAATCTTATAGAT
TCTCCTGGTCATATGGACTTCTGTAGTGAAGTTTCAACTGCAGCCCGTTTGAGTGATGGT
GCATTGGTATTAGTAGATGCTGTAGAAGGTGTTCACATTCAGACCCATGCAGTTCTGCGT
CAGGCGTGGATTGAGAAGCTTACCCCGTGTCTGGTTTTGAATAAGATTGATAGGTTGATT
GTTGAATTGAGATTGACTCCGCTGGAGGCGTATACTCGCTTGCAGAGGATTGTTCATGAG
GTTAATAGTATAGTGAGTGCCTATAAGTCTGAAAAGTATTTGTCAGATGTTGATTCTTTG
CTCTCTGCCCCGTCGGGGCTAGTGGAAGATGAAAATCCAGATCTAGAGTTCTTAGAGGAG
GATGAAGAGGATACTTTCCAACCCCAGAAGGGGAATGTCGCGTTTGTATGTGCACTAGAT
GGATGGGGCTTTAGCATTAGTGATTTTGCTGAGTTTTATGCTTCGAAACTGGGTGCAAGT
TCGGCTGCCTTGCAGAAGGCATTATGGGGACCTCGGTATTTTAATGCCAAGACTAAGATG
ATTGTTGGTAAGAAGGGAATTAGTAGTGGAAGTAAGGCTAGGCCCATGTTTGTTCAATTT
GTTCTTGAGCCACTTTGGCAGGTTTATCAAGCTGCTGTGGAAGCTGATGGAGACAAGGGG
ATGCTTGAGAAAGTTATAAAGTCTTTCAATTTGTCTATACCTCCTCGCGAACTTCAAAAC
AAGGATCCTAAATTTGTGCTTCAATCTGTTATGAGTCGTTGGCTTCCATTGTCCGATACC
ATATTGTCTATGGCTGTCAAACACATGCCTGATCCTATATCTGCTCAGTCTTTCCGTATA
TCTCGGCTGCTTCCAAAGAGAGCACTCTTGGATATGGGCGTGAACCCTGATGTGCTTTCT
GAAGCTGAACTTGTCCGGAAATCTGTGGAGTCCTGTGATTCTAGCCCTGATGCACCTTGT
GTTGTTTTTGTTTCTAAGATGTTTGCTATTCCATCAAAAATGCTTCCGCGTGGAGAGATT
ATGGATGACAGCGGAAATGGTGACTCTGATGAATGTTTCCTTGCATTTGCCAGGATCTTT
AGTGGGGTTCTTCATGCAGGACAGAAAATTTTCGTGCTTACAGCATTGTATGATCCACTA
AAGGAAGAATCAATGCAGAAGCATGTGCAAGAAGCTGAGTTGCAGTCTTTGTATTTGATG
ATGGGTCAAGGGTTGAAACCAGTGGCATCAGCAAAGGCGGGCAACGTCATAGCTATCCGA
GGGCTTGCCCAGCATATATTGAAGAGTGCGACTCTTTCATCTACGTTAAATTGTTGGCCT
TTATCAAGTATGACTTTCCAAGTTTCACCCATGCTTAAAGTTGCAATTGAACCTTCTGAT
CCTGCTGACATGGGTGCACTTATTAAAGGTTTGAGGCTTCTAAACAGAGCGGATCCTTTT
GTTGAGGTTTCTATTTCTGCTAGGGGCGAACATGTTCTTGCTGCAGCAGGTGAGGTGCAC
CTGGAGAGATGCATCAAAGATTTAAAGGAGAGATTTGCAAAGATAAACTTGGAAGTCTCT
GCACCCCTTGTATCTTTCAAAGAGACCATCGAAGGAGATACTGCTAATCCCTTAGAAAAT
TTGAAGCTATTGAGCCGCAGCTCTGATTATTTGGAGAAAGAAACTCCAAATGGAAGATGT
GTTGTTCGAGTGCGTGTTATGAAGCTTCCAACTGCATTGACGAAGCTGCTTGATGAAAGT
TCTGAATTGCTTGAAGACATCATTGGAGGTAAATCTTTGCAGGCTTGTAGAAGCTCGGAA
ACTCTCAGAGGTAACATTGTAGAAGATGAGAATCCAATTGAAGCACTCAAGAAACGCCTA
ATAGATGCTGTGGAGAGCGACTTCTCTACTGGATTTGCTGATACAGAAAAGGATAGGATC
GATAAATGTAAGAAAACGTGGCAAAAATTCTTGAAGAGGATCTGGGCTTTAGGGCCTAAT
CAGGTCGGTCCCAACATCCTCCTCACTCCAGATGTGAAAGGAAAGAGCGACGATGTTTCT
GTTCTTATAAAGGGTTCCCCTTATGTATCGAAAAAATTGGGCTTTACGGATGACAATGAT
GATAGCAGTGCATCACCAGAATCATCAACCAGTGTAGATCCGACCCTTCTACGAGAAGCT
GAGAATCTTGAAAGCAGTATATTATCTGGATTCCAGTTAGCTACAGCATCTGGCCCTTTG
TGTGATGAGCCAATGTGGGGTTTGGCATTTGTTATCGAAGCTTCCATATCTCCATTAGCT
ACGCAACCAAATGATAGTGACACACCTATTCCACAGCTAGAACAGTACGGGCTCTTCCCT
GGACAGGTTATGACTGTTGTTAAGGATGCCTGCAGGGCTGCTGTTCTCCAGAGAAAACCT
CGACTTGTGGAAGCTATGTACTTCTGTGAGCTGAACACCCCACACGACCAGTTGGGCAAC
ACTTATACAGTTCTTAATCGTAGGCGTGCCCATGTGGTAAACGAAGAAATGCTGGAAGGT
TCTTCCTTGTTCACTGTACACGCTTATGTGCCAGTTGCAGAAAGCTTTGGATTCTCCGAT
GAGTTGAGGAGAAAGACTTCTGGAGCTGCAAGTGCACTACTCGTTCTCAGCCACTGGGAA
GCCCTTCCAGAGGATCCTTTCTTTGTGCCTAGGACCGAGGAGGAGAAAGAAGAATTCGGA
GATGGTGCCAGTGTGCCACAGAGTATAGCAAGAAAACTCATGGATTCTGTGAGACGAAAG
AAAGGTCTTCCAGTAGAGGAAAAAGTAGTACAATTCGCGACAAAGCAGAGGACGTTGGCT
CGCAAGGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400005371
PEP Infomation

pacid=37465360 transcript=PGSC0003DMT400007735 locus=PGSC0003DMG400002992 ID=PGSC0003DMT400007735.v4.03 annot-version=v4.03
Sequence

MGDSDGEKIRNICILAHVDHGKTTLADHLIASSGGGVLHPKQAGKLRFMDYLDEEQRRAI
TMKSSSIGLKYKEHSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLIVELRLTPLEAYTRLQRIVHEVNSIVSAYKSEKYLSDVDSL
LSAPSGLVEDENPDLEFLEEDEEDTFQPQKGNVAFVCALDGWGFSISDFAEFYASKLGAS
SAALQKALWGPRYFNAKTKMIVGKKGISSGSKARPMFVQFVLEPLWQVYQAAVEADGDKG
MLEKVIKSFNLSIPPRELQNKDPKFVLQSVMSRWLPLSDTILSMAVKHMPDPISAQSFRI
SRLLPKRALLDMGVNPDVLSEAELVRKSVESCDSSPDAPCVVFVSKMFAIPSKMLPRGEI
MDDSGNGDSDECFLAFARIFSGVLHAGQKIFVLTALYDPLKEESMQKHVQEAELQSLYLM
MGQGLKPVASAKAGNVIAIRGLAQHILKSATLSSTLNCWPLSSMTFQVSPMLKVAIEPSD
PADMGALIKGLRLLNRADPFVEVSISARGEHVLAAAGEVHLERCIKDLKERFAKINLEVS
APLVSFKETIEGDTANPLENLKLLSRSSDYLEKETPNGRCVVRVRVMKLPTALTKLLDES
SELLEDIIGGKSLQACRSSETLRGNIVEDENPIEALKKRLIDAVESDFSTGFADTEKDRI
DKCKKTWQKFLKRIWALGPNQVGPNILLTPDVKGKSDDVSVLIKGSPYVSKKLGFTDDND
DSSASPESSTSVDPTLLREAENLESSILSGFQLATASGPLCDEPMWGLAFVIEASISPLA
TQPNDSDTPIPQLEQYGLFPGQVMTVVKDACRAAVLQRKPRLVEAMYFCELNTPHDQLGN
TYTVLNRRRAHVVNEEMLEGSSLFTVHAYVPVAESFGFSDELRRKTSGAASALLVLSHWE
ALPEDPFFVPRTEEEKEEFGDGASVPQSIARKLMDSVRRKKGLPVEEKVVQFATKQRTLA
RKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400007735
Transcript Infomation

pacid=37465360 locus=PGSC0003DMG400002992 ID=PGSC0003DMT400007735.v4.03 annot-version=v4.03
Sequence

ATGGGGGATTCTGATGGTGAGAAGATTCGGAACATATGTATTCTTGCTCATGTGGATCAT
GGGAAGACAACATTGGCTGACCATCTGATTGCTTCATCTGGTGGTGGTGTACTCCATCCG
AAGCAAGCGGGTAAGCTTAGGTTTATGGATTATTTAGATGAGGAACAGAGGAGGGCGATA
ACTATGAAGAGTTCTTCTATAGGTCTTAAATATAAGGAACATTCGATTAATCTTATAGAT
TCTCCTGGTCATATGGACTTCTGTAGTGAAGTTTCAACTGCAGCCCGTTTGAGTGATGGT
GCATTGGTATTAGTAGATGCTGTAGAAGGTGTTCACATTCAGACCCATGCAGTTCTGCGT
CAGGCGTGGATTGAGAAGCTTACCCCGTGTCTGGTTTTGAATAAGATTGATAGGTTGATT
GTTGAATTGAGATTGACTCCGCTGGAGGCGTATACTCGCTTGCAGAGGATTGTTCATGAG
GTTAATAGTATAGTGAGTGCCTATAAGTCTGAAAAGTATTTGTCAGATGTTGATTCTTTG
CTCTCTGCCCCGTCGGGGCTAGTGGAAGATGAAAATCCAGATCTAGAGTTCTTAGAGGAG
GATGAAGAGGATACTTTCCAACCCCAGAAGGGGAATGTCGCGTTTGTATGTGCACTAGAT
GGATGGGGCTTTAGCATTAGTGATTTTGCTGAGTTTTATGCTTCGAAACTGGGTGCAAGT
TCGGCTGCCTTGCAGAAGGCATTATGGGGACCTCGGTATTTTAATGCCAAGACTAAGATG
ATTGTTGGTAAGAAGGGAATTAGTAGTGGAAGTAAGGCTAGGCCCATGTTTGTTCAATTT
GTTCTTGAGCCACTTTGGCAGGTTTATCAAGCTGCTGTGGAAGCTGATGGAGACAAGGGG
ATGCTTGAGAAAGTTATAAAGTCTTTCAATTTGTCTATACCTCCTCGCGAACTTCAAAAC
AAGGATCCTAAATTTGTGCTTCAATCTGTTATGAGTCGTTGGCTTCCATTGTCCGATACC
ATATTGTCTATGGCTGTCAAACACATGCCTGATCCTATATCTGCTCAGTCTTTCCGTATA
TCTCGGCTGCTTCCAAAGAGAGCACTCTTGGATATGGGCGTGAACCCTGATGTGCTTTCT
GAAGCTGAACTTGTCCGGAAATCTGTGGAGTCCTGTGATTCTAGCCCTGATGCACCTTGT
GTTGTTTTTGTTTCTAAGATGTTTGCTATTCCATCAAAAATGCTTCCGCGTGGAGAGATT
ATGGATGACAGCGGAAATGGTGACTCTGATGAATGTTTCCTTGCATTTGCCAGGATCTTT
AGTGGGGTTCTTCATGCAGGACAGAAAATTTTCGTGCTTACAGCATTGTATGATCCACTA
AAGGAAGAATCAATGCAGAAGCATGTGCAAGAAGCTGAGTTGCAGTCTTTGTATTTGATG
ATGGGTCAAGGGTTGAAACCAGTGGCATCAGCAAAGGCGGGCAACGTCATAGCTATCCGA
GGGCTTGCCCAGCATATATTGAAGAGTGCGACTCTTTCATCTACGTTAAATTGTTGGCCT
TTATCAAGTATGACTTTCCAAGTTTCACCCATGCTTAAAGTTGCAATTGAACCTTCTGAT
CCTGCTGACATGGGTGCACTTATTAAAGGTTTGAGGCTTCTAAACAGAGCGGATCCTTTT
GTTGAGGTTTCTATTTCTGCTAGGGGCGAACATGTTCTTGCTGCAGCAGGTGAGGTGCAC
CTGGAGAGATGCATCAAAGATTTAAAGGAGAGATTTGCAAAGATAAACTTGGAAGTCTCT
GCACCCCTTGTATCTTTCAAAGAGACCATCGAAGGAGATACTGCTAATCCCTTAGAAAAT
TTGAAGCTATTGAGCCGCAGCTCTGATTATTTGGAGAAAGAAACTCCAAATGGAAGATGT
GTTGTTCGAGTGCGTGTTATGAAGCTTCCAACTGCATTGACGAAGCTGCTTGATGAAAGT
TCTGAATTGCTTGAAGACATCATTGGAGGTAAATCTTTGCAGGCTTGTAGAAGCTCGGAA
ACTCTCAGAGGTAACATTGTAGAAGATGAGAATCCAATTGAAGCACTCAAGAAACGCCTA
ATAGATGCTGTGGAGAGCGACTTCTCTACTGGATTTGCTGATACAGAAAAGGATAGGATC
GATAAATGTAAGAAAACGTGGCAAAAATTCTTGAAGAGGATCTGGGCTTTAGGGCCTAAT
CAGGTCGGTCCCAACATCCTCCTCACTCCAGATGTGAAAGGAAAGAGCGACGATGTTTCT
GTTCTTATAAAGGGTTCCCCTTATGTATCGAAAAAATTGGGCTTTACGGATGACAATGAT
GATAGCAGTGCATCACCAGAATCATCAACCAGTGTAGATCCGACCCTTCTACGAGAAGCT
GAGAATCTTGAAAGCAGTATATTATCTGGATTCCAGTTAGCTACAGCATCTGGCCCTTTG
TGTGATGAGCCAATGTGGGGTTTGGCATTTGTTATCGAAGCTTCCATATCTCCATTAGCT
ACGCAACCAAATGATAGTGACACACCTATTCCACAGCTAGAACAGTACGGGCTCTTCCCT
GGACAGGTTATGACTGTTGTTAAGGATGCCTGCAGGGCTGCTGTTCTCCAGAGAAAACCT
CGACTTGTGGAAGCTATGTACTTCTGTGAGCTGAACACCCCACACGACCAGTTGGGCAAC
ACTTATACAGTTCTTAATCGTAGGCGTGCCCATGTGGTAAACGAAGAAATGCTGGAAGGT
TCTTCCTTGTTCACTGTACACGCTTATGTGCCAGTTGCAGAAAGCTTTGGATTCTCCGAT
GAGTTGAGGAGAAAGACTTCTGGAGCTGCAAGTGCACTACTCGTTCTCAGCCACTGGGAA
GCCCTTCCAGAGGATCCTTTCTTTGTGCCTAGGACCGAGGAGGAGAAAGAAGAATTCGGA
GATGGTGCCAGTGTGCCACAGAGTATAGCAAGAAAACTCATGGATTCTGTGAGACGAAAG
AAAGGTCTTCCAGTAGAGGAAAAAGTAGTACAATTCGCGACAAAGCAGAGGACGTTGGCT
CGCAAGGTGTAG