Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007728
CDS Infomation

pacid=37466341 polypeptide=PGSC0003DMP400005364 locus=PGSC0003DMG400002987 ID=PGSC0003DMT400007728.v4.03 annot-version=v4.03
Sequence

ATGTTTGGAAGAGGAGGGAAAAAAAAGAGTGATAATACAAGGTTCTATGAAATCTTGGGT
GTTTCCAAGAATGCTTCAGAAGATGAAATCAAGAAAGCTTATAGAAAAGCTGCTATGAAG
AATCACCCTGATAAGGGTGGTGATCCTGAAAAGTTTAAGGAGCTAGCTCAAGCTTATGAG
GTCTTGAGTGACTCACAGAAGCGTGAGATTTATGATCAGTATGGAGAAGAAGCACTGAAA
GAAGGAATGGGTGGTGGTGGTGGCACACATGATCCATTTGACCTCTTTAATTCCTTCTTT
AGTGGAAGTCCTTTTGGAGGTGGTGGTGGTCGTAGAGGACAAAGAGAGAGGAGGGGTGAC
GATGTAGTGCATCCATTGAAGGTGTCGCTTGAGGACCTATACACTGGGATAACCAAGAAA
CTCTCGCTTTCGCGCAATGTTATTTGCTCCAAGTGTAGTGGCAAGGGGTCGAAGTCTGGT
GATTCAATGAAGTGTTCTGGTTGTGAAGGTACTGGTATGAAGGTTTCAATCAGACAACTT
GGCCCTGGAATGATCCAGCAAATGCAGCATCCTTGTAATAAATGCAAGGGTACCGGAGAG
ACAATTGACGATAAGGATCGTTGTCCTCAATGCAAAGGTGAAAAAGTGGTACAGGAGAAG
AAAGTCATTGAAGTCCATGTTGACAAAGGAATGCAGAATGGACAGAAAATTACATTCCCT
GGCGAGGCTGATGAAGCGCCTGATACAGTTACTGGAGATGTAGTTTTCGTTCTCCAACAG
AAAGAGCACCCGAAGTTCAAGAGGAAGGGTGAAGATCTGTTTGTTGATCACACCTTGACC
TTAACTGAGGCACTGTGTGGCTTCCAGTTCATATTGACACACTTGGATGGCAGACAGCTC
CTCATAAAATCAAATCCTGGAGAAGTTGTCAAACCTGATCAATTCAAGGCGATCAATGAT
GAAGGAATGCCAGTTTACCAGAGGCCATTCATGAAGGGTAAACTGTACATTCATTTCACC
GTGGAATTCCCGGATTCGTTGAGCCTGCCACAGGTGCAGCTTCTGGAGGCAATCTTACCA
CCAAGACCTACATCACAGTACTCAGACATGGAACTGGATGAATGTGAGGAGACCACATTG
CATGATGTGAATATGGAGGAGGAAATGAGAAGGAAACAAGCTGCACAACAAGAAGCATAT
GATGAGGATGAAGAGATGTCTGGTAGTGGAGGACAGAGAGTACAGTGTGCTCAACAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400005364
PEP Infomation

pacid=37466341 transcript=PGSC0003DMT400007728 locus=PGSC0003DMG400002987 ID=PGSC0003DMT400007728.v4.03 annot-version=v4.03
Sequence

MFGRGGKKKSDNTRFYEILGVSKNASEDEIKKAYRKAAMKNHPDKGGDPEKFKELAQAYE
VLSDSQKREIYDQYGEEALKEGMGGGGGTHDPFDLFNSFFSGSPFGGGGGRRGQRERRGD
DVVHPLKVSLEDLYTGITKKLSLSRNVICSKCSGKGSKSGDSMKCSGCEGTGMKVSIRQL
GPGMIQQMQHPCNKCKGTGETIDDKDRCPQCKGEKVVQEKKVIEVHVDKGMQNGQKITFP
GEADEAPDTVTGDVVFVLQQKEHPKFKRKGEDLFVDHTLTLTEALCGFQFILTHLDGRQL
LIKSNPGEVVKPDQFKAINDEGMPVYQRPFMKGKLYIHFTVEFPDSLSLPQVQLLEAILP
PRPTSQYSDMELDECEETTLHDVNMEEEMRRKQAAQQEAYDEDEEMSGSGGQRVQCAQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400007728
Transcript Infomation

pacid=37466341 locus=PGSC0003DMG400002987 ID=PGSC0003DMT400007728.v4.03 annot-version=v4.03
Sequence

ATGTTTGGAAGAGGAGGGAAAAAAAAGAGTGATAATACAAGGTTCTATGAAATCTTGGGT
GTTTCCAAGAATGCTTCAGAAGATGAAATCAAGAAAGCTTATAGAAAAGCTGCTATGAAG
AATCACCCTGATAAGGGTGGTGATCCTGAAAAGTTTAAGGAGCTAGCTCAAGCTTATGAG
GTCTTGAGTGACTCACAGAAGCGTGAGATTTATGATCAGTATGGAGAAGAAGCACTGAAA
GAAGGAATGGGTGGTGGTGGTGGCACACATGATCCATTTGACCTCTTTAATTCCTTCTTT
AGTGGAAGTCCTTTTGGAGGTGGTGGTGGTCGTAGAGGACAAAGAGAGAGGAGGGGTGAC
GATGTAGTGCATCCATTGAAGGTGTCGCTTGAGGACCTATACACTGGGATAACCAAGAAA
CTCTCGCTTTCGCGCAATGTTATTTGCTCCAAGTGTAGTGGCAAGGGGTCGAAGTCTGGT
GATTCAATGAAGTGTTCTGGTTGTGAAGGTACTGGTATGAAGGTTTCAATCAGACAACTT
GGCCCTGGAATGATCCAGCAAATGCAGCATCCTTGTAATAAATGCAAGGGTACCGGAGAG
ACAATTGACGATAAGGATCGTTGTCCTCAATGCAAAGGTGAAAAAGTGGTACAGGAGAAG
AAAGTCATTGAAGTCCATGTTGACAAAGGAATGCAGAATGGACAGAAAATTACATTCCCT
GGCGAGGCTGATGAAGCGCCTGATACAGTTACTGGAGATGTAGTTTTCGTTCTCCAACAG
AAAGAGCACCCGAAGTTCAAGAGGAAGGGTGAAGATCTGTTTGTTGATCACACCTTGACC
TTAACTGAGGCACTGTGTGGCTTCCAGTTCATATTGACACACTTGGATGGCAGACAGCTC
CTCATAAAATCAAATCCTGGAGAAGTTGTCAAACCTGATCAATTCAAGGCGATCAATGAT
GAAGGAATGCCAGTTTACCAGAGGCCATTCATGAAGGGTAAACTGTACATTCATTTCACC
GTGGAATTCCCGGATTCGTTGAGCCTGCCACAGGTGCAGCTTCTGGAGGCAATCTTACCA
CCAAGACCTACATCACAGTACTCAGACATGGAACTGGATGAATGTGAGGAGACCACATTG
CATGATGTGAATATGGAGGAGGAAATGAGAAGGAAACAAGCTGCACAACAAGAAGCATAT
GATGAGGATGAAGAGATGTCTGGTAGTGGAGGACAGAGAGTACAGTGTGCTCAACAGTAG