Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007597
CDS Infomation

pacid=37448022 polypeptide=PGSC0003DMP400005286 locus=PGSC0003DMG400002932 ID=PGSC0003DMT400007597.v4.03 annot-version=v4.03
Sequence

ATGGCGGATCAGGAGGAATTTGTGAAATCGGTAGAAGACGGGTTGAGGTTATCAAAGCGG
ATATATTTTGGGAAGGATCGTGCGGTTGCGCCGCCGAAGCAGATGACGGCGATGGAGAAA
ACGGCGGAATCGTATTTTCCGACGTCGCCTATGATGTATGCTGTGATTGAGAATCCTGCG
TCCGTTGATAACCCGGATATTCCGAGTTATCAACCTCATGTGCATGGCAGGTGTGATCCT
CCTGCTTTGATTCCGTTACAGATGAACGGAGTTTCGATTGCGGCGGATTGTTATTTCGAT
ACGGCGTTTATCACTGTTAAGGGTTCGTGGCGTCTACATTGTGTTATGAGTTGCCGGAGC
TGTGATTGTCGCATTGCTGTTCCCATGGGCGAACAGGGTTCAATTCTAGGTGTCGAGATT
GAGTTACCCAGGAAATCATACAGCACAAAACTAGTTGCCGAGGATGATGAAAAAGAAAAT
AAGAAGTTGGTCAAAATTGAAGATGGATGCTTTCTGAAGCCACATATTTTTACCCTTACA
ATACCAGAGATTGATGGGGGAACATATATCTCAGTCACTATTAGATGGTCTCAGAAGTTA
TTGTATCGCGATGGCCAATTTACCTTGAGCATACCCTATAGTTTCCCGGTGTATGTGACT
CCAGTTGGAAAGAAGATATCTAAGAAAGAAAAGATACAGTTTAATGTTAACTGTGGTCCG
CGAGCTGAGGTTTCGTGTAAGGCTATCAGTCACCCTCTTAAGGAACTAGACGACGAAGAT
GAAAAGTTAGGCTGGTTCTATGAAGCTGATGTCCTTAACTGGTCAAGTAGTGATGTTGTA
ATTACTTACAAGATCTCGAGTCCCAACTACCACGGCAGTGTACTTCTGCAATCTCCCCAA
CAACATGACACTGATCAGAGAAAGATGTTCAGCTGCTATCTTTTTCCAGGTGCCTTGGAG
TGTAGAAAGGTATTCAGAAAGGAAGTGATATTTGTTGTTGATATAAGTGGGAGCATGAAG
GGAAAACCAATCGACGATTCCAAACAAGCACTCTCTGTAGCATTATCAAAACTTGATTCC
CAAGATCTGTTTAATATAATAGCTTTCAACAATGAAGAGTACCTATTTTCATCATCTCTG
GAGGTAGCAACCAAGGAGGCTATTGACAATGCAATTCAGTGGATTGACATGAACTTTATT
GCTGGTGGCAGTACAAATATCTTGAATCCAATGAAACAGGCCATAGGGATGTTGTCTAAT
GCTGGAGAATCCATGCCTATCATTTTTCTGGTCACAGATGGAGCTGTTGAAGATGAAAGA
CAGATCTGTGAATTCGTGAAGAGTCATCTCACACAAAACAGAACAATGTGCCCACGACTT
TACACATTTGGCATAGGATTATTCTGCAACCATTATTTTCTGCGCACACTAGCAATGATG
AGTCGTGGTCATTATGATGCTGCTATTGATGTTGAATCACTTCAGGTTCGTTTGGAGAGG
CTATTCTCCAGGGCTTCATCTATCATCCTTGCAAATATTGCCTTTGAGAACCTTGATGGC
CTTGAAGAATTAGAGGTGTATCCTTCTCAAATTCCAGACCTTTCATCTGAAGGACCTGTA
GTCTTATCAGGTAGATACCAAGGAGTGTTTCCTGAGATGCTCAAAGCTAAAGGAATATTA
GCGGACATGAGTAATTTCTCTGTGGAGCTGAAAGGGTTCAAGTCCAAAGCCATACCTCTT
GACAAGGCAAGGGTGAAGCAGCAGATTGAAATACTCACAGCTCAGGCATGGTTTACACAA
AATAAGGATCTTGAACAGAAGATAGCAAAAATGAGTATACAAGACGCAGTGATCTCTGAG
TATACACGCATGGCATTGGTGGAGACAGAAAAAGTGAAAATCATTAAGCCAACTACAAAG
AGGAAGGTTCATTCTGATGATGAGAAGATAGAGGAACGCTTAGTACAGAAGACAATATTA
CTACACTACCTTGGCTTTGGTTTTGGTAACCTCACTGCTACAATTGAGAATATTCCTCCT
GGGGCCATTGATATAGAGGACGAAGCAGCTGAGATAATTGCAAAAGCAACATCTAATTGT
TTTGGGAAATTGTGTGGTCTATGCTGCTGTTGCAGTTGCTGCATTAGAACGTGTTCGACT
ATGAATCATCAGTGTGCAATTGCACTCACACAATGTCTAGGTGCCTTGGGATGTTTAGGT
TGCTTCACTTGTTGTCAATACTGCTGTTTTGAAGATAATAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400005286
PEP Infomation

pacid=37448022 transcript=PGSC0003DMT400007597 locus=PGSC0003DMG400002932 ID=PGSC0003DMT400007597.v4.03 annot-version=v4.03
Sequence

MADQEEFVKSVEDGLRLSKRIYFGKDRAVAPPKQMTAMEKTAESYFPTSPMMYAVIENPA
SVDNPDIPSYQPHVHGRCDPPALIPLQMNGVSIAADCYFDTAFITVKGSWRLHCVMSCRS
CDCRIAVPMGEQGSILGVEIELPRKSYSTKLVAEDDEKENKKLVKIEDGCFLKPHIFTLT
IPEIDGGTYISVTIRWSQKLLYRDGQFTLSIPYSFPVYVTPVGKKISKKEKIQFNVNCGP
RAEVSCKAISHPLKELDDEDEKLGWFYEADVLNWSSSDVVITYKISSPNYHGSVLLQSPQ
QHDTDQRKMFSCYLFPGALECRKVFRKEVIFVVDISGSMKGKPIDDSKQALSVALSKLDS
QDLFNIIAFNNEEYLFSSSLEVATKEAIDNAIQWIDMNFIAGGSTNILNPMKQAIGMLSN
AGESMPIIFLVTDGAVEDERQICEFVKSHLTQNRTMCPRLYTFGIGLFCNHYFLRTLAMM
SRGHYDAAIDVESLQVRLERLFSRASSIILANIAFENLDGLEELEVYPSQIPDLSSEGPV
VLSGRYQGVFPEMLKAKGILADMSNFSVELKGFKSKAIPLDKARVKQQIEILTAQAWFTQ
NKDLEQKIAKMSIQDAVISEYTRMALVETEKVKIIKPTTKRKVHSDDEKIEERLVQKTIL
LHYLGFGFGNLTATIENIPPGAIDIEDEAAEIIAKATSNCFGKLCGLCCCCSCCIRTCST
MNHQCAIALTQCLGALGCLGCFTCCQYCCFEDNK*

Transcript Sequence

Transcript ID

PGSC0003DMT400007597
Transcript Infomation

pacid=37448022 locus=PGSC0003DMG400002932 ID=PGSC0003DMT400007597.v4.03 annot-version=v4.03
Sequence

ATGGCGGATCAGGAGGAATTTGTGAAATCGGTAGAAGACGGGTTGAGGTTATCAAAGCGG
ATATATTTTGGGAAGGATCGTGCGGTTGCGCCGCCGAAGCAGATGACGGCGATGGAGAAA
ACGGCGGAATCGTATTTTCCGACGTCGCCTATGATGTATGCTGTGATTGAGAATCCTGCG
TCCGTTGATAACCCGGATATTCCGAGTTATCAACCTCATGTGCATGGCAGGTGTGATCCT
CCTGCTTTGATTCCGTTACAGATGAACGGAGTTTCGATTGCGGCGGATTGTTATTTCGAT
ACGGCGTTTATCACTGTTAAGGGTTCGTGGCGTCTACATTGTGTTATGAGTTGCCGGAGC
TGTGATTGTCGCATTGCTGTTCCCATGGGCGAACAGGGTTCAATTCTAGGTGTCGAGATT
GAGTTACCCAGGAAATCATACAGCACAAAACTAGTTGCCGAGGATGATGAAAAAGAAAAT
AAGAAGTTGGTCAAAATTGAAGATGGATGCTTTCTGAAGCCACATATTTTTACCCTTACA
ATACCAGAGATTGATGGGGGAACATATATCTCAGTCACTATTAGATGGTCTCAGAAGTTA
TTGTATCGCGATGGCCAATTTACCTTGAGCATACCCTATAGTTTCCCGGTGTATGTGACT
CCAGTTGGAAAGAAGATATCTAAGAAAGAAAAGATACAGTTTAATGTTAACTGTGGTCCG
CGAGCTGAGGTTTCGTGTAAGGCTATCAGTCACCCTCTTAAGGAACTAGACGACGAAGAT
GAAAAGTTAGGCTGGTTCTATGAAGCTGATGTCCTTAACTGGTCAAGTAGTGATGTTGTA
ATTACTTACAAGATCTCGAGTCCCAACTACCACGGCAGTGTACTTCTGCAATCTCCCCAA
CAACATGACACTGATCAGAGAAAGATGTTCAGCTGCTATCTTTTTCCAGGTGCCTTGGAG
TGTAGAAAGGTATTCAGAAAGGAAGTGATATTTGTTGTTGATATAAGTGGGAGCATGAAG
GGAAAACCAATCGACGATTCCAAACAAGCACTCTCTGTAGCATTATCAAAACTTGATTCC
CAAGATCTGTTTAATATAATAGCTTTCAACAATGAAGAGTACCTATTTTCATCATCTCTG
GAGGTAGCAACCAAGGAGGCTATTGACAATGCAATTCAGTGGATTGACATGAACTTTATT
GCTGGTGGCAGTACAAATATCTTGAATCCAATGAAACAGGCCATAGGGATGTTGTCTAAT
GCTGGAGAATCCATGCCTATCATTTTTCTGGTCACAGATGGAGCTGTTGAAGATGAAAGA
CAGATCTGTGAATTCGTGAAGAGTCATCTCACACAAAACAGAACAATGTGCCCACGACTT
TACACATTTGGCATAGGATTATTCTGCAACCATTATTTTCTGCGCACACTAGCAATGATG
AGTCGTGGTCATTATGATGCTGCTATTGATGTTGAATCACTTCAGGTTCGTTTGGAGAGG
CTATTCTCCAGGGCTTCATCTATCATCCTTGCAAATATTGCCTTTGAGAACCTTGATGGC
CTTGAAGAATTAGAGGTGTATCCTTCTCAAATTCCAGACCTTTCATCTGAAGGACCTGTA
GTCTTATCAGGTAGATACCAAGGAGTGTTTCCTGAGATGCTCAAAGCTAAAGGAATATTA
GCGGACATGAGTAATTTCTCTGTGGAGCTGAAAGGGTTCAAGTCCAAAGCCATACCTCTT
GACAAGGCAAGGGTGAAGCAGCAGATTGAAATACTCACAGCTCAGGCATGGTTTACACAA
AATAAGGATCTTGAACAGAAGATAGCAAAAATGAGTATACAAGACGCAGTGATCTCTGAG
TATACACGCATGGCATTGGTGGAGACAGAAAAAGTGAAAATCATTAAGCCAACTACAAAG
AGGAAGGTTCATTCTGATGATGAGAAGATAGAGGAACGCTTAGTACAGAAGACAATATTA
CTACACTACCTTGGCTTTGGTTTTGGTAACCTCACTGCTACAATTGAGAATATTCCTCCT
GGGGCCATTGATATAGAGGACGAAGCAGCTGAGATAATTGCAAAAGCAACATCTAATTGT
TTTGGGAAATTGTGTGGTCTATGCTGCTGTTGCAGTTGCTGCATTAGAACGTGTTCGACT
ATGAATCATCAGTGTGCAATTGCACTCACACAATGTCTAGGTGCCTTGGGATGTTTAGGT
TGCTTCACTTGTTGTCAATACTGCTGTTTTGAAGATAATAAATAA