Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007571
CDS Infomation

pacid=37449376 polypeptide=PGSC0003DMP400005262 locus=PGSC0003DMG400002921 ID=PGSC0003DMT400007571.v4.03 annot-version=v4.03
Sequence

ATGGCTGCATCAGCCTCTTCTTTTGCTGCTAACAAATTCTTGCAGCCCATCAACTCCACC
AGATCCATTGACAACAACAACAAAAAGACCCTTTTGGGAAATCAGCTTAAAGACAGCTCC
TTTTTTCTTGGATCAGCTAAGAAACTCTATATGAAGAAATCCTTTTCGTCTCAGAACTCG
AAAAGCCGATCTAATGGTGTTTTTGCTGTTTCTGAGGTTGTTAAGGACAAGAAGCTCAAT
ACAGACTCCTCACTCTCCAATCTGTTAATTACCAAGGATGAAGGGTTGGAGTTGTATGAA
GATATGGTTCTTGGAAGAGCCTTTGAGGACATGTGTGCCCAAATGTATTACAGAGGGAAA
ATGTTTGGTTTTGTGCATTTGTACAACGGCCAAGAGGCAGTCTCTACTGGGTTCATTAGG
CTACTGAAGAAGGAGGATTCTGTGGTTAGCACTTATCGTGATCACGTCCATGCATTGAGC
AAAGGAGTTCCAGCACGCCAAGTGATGAGTGAGCTCTTTGGGAAGACCACTGGCTGTTGC
AGAGGCCAGGGTGGCTCCATGCACATGTTCTCTAAAGAGCACAATGTTCTTGGTGGTTTC
GCTTTCATTGGTGAGGGTATCCCTGTGGCAACAGGTGCCGCCTTCACTAGCAAGTATAGA
AGGGAGGTCATGAAAGAGGCAGATTGTGATCATGTAACTATGGCCTTCTTTGGTGATGGA
ACTTGCAACAATGGCCAGTTCTTTGAGTGTTTGAACATGGCTGCTCTGTGGAAATTGCCC
ATTATATTTGTTGTTGAGAACAATCTGTGGGCAATTGGCATGTCTCACTTGAGATCTACT
TCAGATCCTGAAATTTGGAAGAAAGGTCCCGCCTTCGGGATGCCTGGGGTTCACGTTGAT
GGCATGGATGTGTTGAAGGTGAGGGAGGTAGCAAAGGAAGCTGTTGCCAGAGCTAGGAGG
GGCGATGGTCCCACTCTGGTTGAGTGTGAGACTTACCGGTTTAGAGGACACTCTTTGGCC
GATCCAGATGAACTTCGTGACCCTGCTGAAAAGAACCATTATGCTGCACGAGATCCTATC
AGTGCCTTGAAGAAGTATATGTTTGAGAACAATCTTGCTAGTGAAGCAGAGTTGAAGGCC
ATTGATAAGAAGATTGATGAATTGGTTGAAGAAGCTGTCGAGTTTGCAGATGAAAGCCCT
CATCCTGTTCGTAGCCAGCTGCTAGAGAACGTCTTTGCTGATCCAAAAGGCTTTGGAATT
GGGCCTGATGGAAGGTACAGATGTGAAGATCCCAAGTTCACTGAAGGCACTGCTCATGTC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400005262
PEP Infomation

pacid=37449376 transcript=PGSC0003DMT400007571 locus=PGSC0003DMG400002921 ID=PGSC0003DMT400007571.v4.03 annot-version=v4.03
Sequence

MAASASSFAANKFLQPINSTRSIDNNNKKTLLGNQLKDSSFFLGSAKKLYMKKSFSSQNS
KSRSNGVFAVSEVVKDKKLNTDSSLSNLLITKDEGLELYEDMVLGRAFEDMCAQMYYRGK
MFGFVHLYNGQEAVSTGFIRLLKKEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCC
RGQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFTSKYRREVMKEADCDHVTMAFFGDG
TCNNGQFFECLNMAALWKLPIIFVVENNLWAIGMSHLRSTSDPEIWKKGPAFGMPGVHVD
GMDVLKVREVAKEAVARARRGDGPTLVECETYRFRGHSLADPDELRDPAEKNHYAARDPI
SALKKYMFENNLASEAELKAIDKKIDELVEEAVEFADESPHPVRSQLLENVFADPKGFGI
GPDGRYRCEDPKFTEGTAHV*

Transcript Sequence

Transcript ID

PGSC0003DMT400007571
Transcript Infomation

pacid=37449376 locus=PGSC0003DMG400002921 ID=PGSC0003DMT400007571.v4.03 annot-version=v4.03
Sequence

ATGGCTGCATCAGCCTCTTCTTTTGCTGCTAACAAATTCTTGCAGCCCATCAACTCCACC
AGATCCATTGACAACAACAACAAAAAGACCCTTTTGGGAAATCAGCTTAAAGACAGCTCC
TTTTTTCTTGGATCAGCTAAGAAACTCTATATGAAGAAATCCTTTTCGTCTCAGAACTCG
AAAAGCCGATCTAATGGTGTTTTTGCTGTTTCTGAGGTTGTTAAGGACAAGAAGCTCAAT
ACAGACTCCTCACTCTCCAATCTGTTAATTACCAAGGATGAAGGGTTGGAGTTGTATGAA
GATATGGTTCTTGGAAGAGCCTTTGAGGACATGTGTGCCCAAATGTATTACAGAGGGAAA
ATGTTTGGTTTTGTGCATTTGTACAACGGCCAAGAGGCAGTCTCTACTGGGTTCATTAGG
CTACTGAAGAAGGAGGATTCTGTGGTTAGCACTTATCGTGATCACGTCCATGCATTGAGC
AAAGGAGTTCCAGCACGCCAAGTGATGAGTGAGCTCTTTGGGAAGACCACTGGCTGTTGC
AGAGGCCAGGGTGGCTCCATGCACATGTTCTCTAAAGAGCACAATGTTCTTGGTGGTTTC
GCTTTCATTGGTGAGGGTATCCCTGTGGCAACAGGTGCCGCCTTCACTAGCAAGTATAGA
AGGGAGGTCATGAAAGAGGCAGATTGTGATCATGTAACTATGGCCTTCTTTGGTGATGGA
ACTTGCAACAATGGCCAGTTCTTTGAGTGTTTGAACATGGCTGCTCTGTGGAAATTGCCC
ATTATATTTGTTGTTGAGAACAATCTGTGGGCAATTGGCATGTCTCACTTGAGATCTACT
TCAGATCCTGAAATTTGGAAGAAAGGTCCCGCCTTCGGGATGCCTGGGGTTCACGTTGAT
GGCATGGATGTGTTGAAGGTGAGGGAGGTAGCAAAGGAAGCTGTTGCCAGAGCTAGGAGG
GGCGATGGTCCCACTCTGGTTGAGTGTGAGACTTACCGGTTTAGAGGACACTCTTTGGCC
GATCCAGATGAACTTCGTGACCCTGCTGAAAAGAACCATTATGCTGCACGAGATCCTATC
AGTGCCTTGAAGAAGTATATGTTTGAGAACAATCTTGCTAGTGAAGCAGAGTTGAAGGCC
ATTGATAAGAAGATTGATGAATTGGTTGAAGAAGCTGTCGAGTTTGCAGATGAAAGCCCT
CATCCTGTTCGTAGCCAGCTGCTAGAGAACGTCTTTGCTGATCCAAAAGGCTTTGGAATT
GGGCCTGATGGAAGGTACAGATGTGAAGATCCCAAGTTCACTGAAGGCACTGCTCATGTC
TAG