Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007518
CDS Infomation

pacid=37448243 polypeptide=PGSC0003DMP400005230 locus=PGSC0003DMG400002902 ID=PGSC0003DMT400007518.v4.03 annot-version=v4.03
Sequence

ATGGCCGCCGTTCCCCTAATCCTTCATCTCCTTCCTCAAGCATCGTCTCCGAAAAAACAC
CATCTTTTCCTTATTCATATCTCCATTTTCTTCCTCATTTCTCTATCTAATCCACAATTT
TCTTTCTCCATTTCCGAGGACGATGCCTTGATCAAATTCAAAGAATCTTTAAAAAACACA
ACATCTTTAGATTCATCTTGGCTTAAAGGTACTAGTCCATGTGACAAAAACAAGAAATGG
GATCGTATTCAATGCGAAGGGAACGTGGTTGAAGGCCTCCTTTTAGGTGAAGCTGGCTTA
TCAGGAGAACTAGATATTGATCCTTTGATTGCACTTCCAGGTCTCCGAGTTCTTGAAATC
GCGAATAATTCATTTTCAGGCACAATCCCTGAATTCTTCTTGCTTGGTGCACTTAAATCT
ATATATATAGATGGAAACCAATTCTCAGGTGAGATTCCTAAAGATTTCTTTGCCAAAATG
GGGTCTCTTAAGAAGATTTGGTTTGCACGAAACAAATTCTCCGGTTCAATTCCTGAATCT
TTAACCAACTTGAAGTACTTGATGGAACTTCGTCTTGAAAGTAATGCATTTTCAGGACGC
GTTCCATCTTTCTCACAAGTGAGTTTAACATCTATTGATCTTTCGAATAACAAATTACAA
GGCGAAATCCCTCAGGGGATGTCAAAATTTGGTGCTGATCCTTTTAAAGGAAATGCAGAC
TTATGTGGACAACAATTAGGGAAAGAATGTAATAAGGGAATCAATAAGACTCAAGGTGCA
CCAATGTCAAAATTGAAATGGATCATTCTTGGTATAGTAGTTAGTCTTTTATTGGTGACC
ATTCTTTTTCGCGTCAAGCGCAAGGAAGATCATTTCGACAAGCTTGGGAAAGAGAATCTT
GATGAGGGGTTGCACGTTGGTAGCTCGATTAGGAAGAGCATGAGCATTCATAGCAAAGGA
GGTGATTCTGGTCGTGGATCAACACGAAGGGGAGGGTCACAAGGTGGTAAGGCTATGGGA
GATCTCGTGTTGGTGAACAACGAAAATGGTACATTCGGATTGCCTGATTTGATGAAGGCA
GCTGCTGAGGTACTTGGAAACGGAGTGTTAGGATCAGCTTACAAGGCAAAAATGGGAAAT
GGAATGTCTGTTGTGGTTAAGAGATTGAGAGAGATGAATAAAATGAATAGAGATGTATTT
GATGCAGAAATGAGAAAACTTGGAAAGTTAAGACACAAAAATTTACTTCAATTATTGGCA
TATCATTACAGAAAGGAAGAGAAATTGATGGTATCTGAATATGTTCCCAAAGGCAGCCTA
TTATATCTGTTACATGGTGATCGAGGGATATCACACGGTGAGCTAAACTGGCCTACTCGT
CTAAGGATCATCCAGGGAGTTGCTAGTGGAATGTGTTATCTTCATTCCGAGTTTGCATCG
TATGCAGTGCCTCATGGAAACCTCAAGTCTAGCAACATTCTACTCAATGAAAAATATGAG
CCACTTCTATCAGATTACGCCTTCTATCCACTGATCAACAACACGCAAATTGTTCAATCC
CTTTTCGCGTATAAAGCACCAGAAGCCATACAACATCAACATCTCACTCCAAAATGTGAC
ATATATTGTCTTGGAATCATAATACTTGAAATCCTTACAGGGAAATTCCCTTCTCAGTAT
CTCAACAATCAAAAAGGTGGAACGGACGTTGTTCAATGGGTGCAATCAGCTATAGCTGAC
CAAAGAGAATCTGAATTGATTGATCCAGAGATAGCGTCTGCAACAGACTCCGTTGAACAA
ATGGTGAAACTCCTTCATGTAGGAGCTGCTTGTACTATAAGCGATCCGGATAAGAGGATT
GATATGAAGGAAGCATTAAGGAGGATAGAAGAGATAAGTTTAATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400005230
PEP Infomation

pacid=37448243 transcript=PGSC0003DMT400007518 locus=PGSC0003DMG400002902 ID=PGSC0003DMT400007518.v4.03 annot-version=v4.03
Sequence

MAAVPLILHLLPQASSPKKHHLFLIHISIFFLISLSNPQFSFSISEDDALIKFKESLKNT
TSLDSSWLKGTSPCDKNKKWDRIQCEGNVVEGLLLGEAGLSGELDIDPLIALPGLRVLEI
ANNSFSGTIPEFFLLGALKSIYIDGNQFSGEIPKDFFAKMGSLKKIWFARNKFSGSIPES
LTNLKYLMELRLESNAFSGRVPSFSQVSLTSIDLSNNKLQGEIPQGMSKFGADPFKGNAD
LCGQQLGKECNKGINKTQGAPMSKLKWIILGIVVSLLLVTILFRVKRKEDHFDKLGKENL
DEGLHVGSSIRKSMSIHSKGGDSGRGSTRRGGSQGGKAMGDLVLVNNENGTFGLPDLMKA
AAEVLGNGVLGSAYKAKMGNGMSVVVKRLREMNKMNRDVFDAEMRKLGKLRHKNLLQLLA
YHYRKEEKLMVSEYVPKGSLLYLLHGDRGISHGELNWPTRLRIIQGVASGMCYLHSEFAS
YAVPHGNLKSSNILLNEKYEPLLSDYAFYPLINNTQIVQSLFAYKAPEAIQHQHLTPKCD
IYCLGIIILEILTGKFPSQYLNNQKGGTDVVQWVQSAIADQRESELIDPEIASATDSVEQ
MVKLLHVGAACTISDPDKRIDMKEALRRIEEISLI*

Transcript Sequence

Transcript ID

PGSC0003DMT400007518
Transcript Infomation

pacid=37448243 locus=PGSC0003DMG400002902 ID=PGSC0003DMT400007518.v4.03 annot-version=v4.03
Sequence

ATGGCCGCCGTTCCCCTAATCCTTCATCTCCTTCCTCAAGCATCGTCTCCGAAAAAACAC
CATCTTTTCCTTATTCATATCTCCATTTTCTTCCTCATTTCTCTATCTAATCCACAATTT
TCTTTCTCCATTTCCGAGGACGATGCCTTGATCAAATTCAAAGAATCTTTAAAAAACACA
ACATCTTTAGATTCATCTTGGCTTAAAGGTACTAGTCCATGTGACAAAAACAAGAAATGG
GATCGTATTCAATGCGAAGGGAACGTGGTTGAAGGCCTCCTTTTAGGTGAAGCTGGCTTA
TCAGGAGAACTAGATATTGATCCTTTGATTGCACTTCCAGGTCTCCGAGTTCTTGAAATC
GCGAATAATTCATTTTCAGGCACAATCCCTGAATTCTTCTTGCTTGGTGCACTTAAATCT
ATATATATAGATGGAAACCAATTCTCAGGTGAGATTCCTAAAGATTTCTTTGCCAAAATG
GGGTCTCTTAAGAAGATTTGGTTTGCACGAAACAAATTCTCCGGTTCAATTCCTGAATCT
TTAACCAACTTGAAGTACTTGATGGAACTTCGTCTTGAAAGTAATGCATTTTCAGGACGC
GTTCCATCTTTCTCACAAGTGAGTTTAACATCTATTGATCTTTCGAATAACAAATTACAA
GGCGAAATCCCTCAGGGGATGTCAAAATTTGGTGCTGATCCTTTTAAAGGAAATGCAGAC
TTATGTGGACAACAATTAGGGAAAGAATGTAATAAGGGAATCAATAAGACTCAAGGTGCA
CCAATGTCAAAATTGAAATGGATCATTCTTGGTATAGTAGTTAGTCTTTTATTGGTGACC
ATTCTTTTTCGCGTCAAGCGCAAGGAAGATCATTTCGACAAGCTTGGGAAAGAGAATCTT
GATGAGGGGTTGCACGTTGGTAGCTCGATTAGGAAGAGCATGAGCATTCATAGCAAAGGA
GGTGATTCTGGTCGTGGATCAACACGAAGGGGAGGGTCACAAGGTGGTAAGGCTATGGGA
GATCTCGTGTTGGTGAACAACGAAAATGGTACATTCGGATTGCCTGATTTGATGAAGGCA
GCTGCTGAGGTACTTGGAAACGGAGTGTTAGGATCAGCTTACAAGGCAAAAATGGGAAAT
GGAATGTCTGTTGTGGTTAAGAGATTGAGAGAGATGAATAAAATGAATAGAGATGTATTT
GATGCAGAAATGAGAAAACTTGGAAAGTTAAGACACAAAAATTTACTTCAATTATTGGCA
TATCATTACAGAAAGGAAGAGAAATTGATGGTATCTGAATATGTTCCCAAAGGCAGCCTA
TTATATCTGTTACATGGTGATCGAGGGATATCACACGGTGAGCTAAACTGGCCTACTCGT
CTAAGGATCATCCAGGGAGTTGCTAGTGGAATGTGTTATCTTCATTCCGAGTTTGCATCG
TATGCAGTGCCTCATGGAAACCTCAAGTCTAGCAACATTCTACTCAATGAAAAATATGAG
CCACTTCTATCAGATTACGCCTTCTATCCACTGATCAACAACACGCAAATTGTTCAATCC
CTTTTCGCGTATAAAGCACCAGAAGCCATACAACATCAACATCTCACTCCAAAATGTGAC
ATATATTGTCTTGGAATCATAATACTTGAAATCCTTACAGGGAAATTCCCTTCTCAGTAT
CTCAACAATCAAAAAGGTGGAACGGACGTTGTTCAATGGGTGCAATCAGCTATAGCTGAC
CAAAGAGAATCTGAATTGATTGATCCAGAGATAGCGTCTGCAACAGACTCCGTTGAACAA
ATGGTGAAACTCCTTCATGTAGGAGCTGCTTGTACTATAAGCGATCCGGATAAGAGGATT
GATATGAAGGAAGCATTAAGGAGGATAGAAGAGATAAGTTTAATATGA