Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007506
CDS Infomation

pacid=37447337 polypeptide=PGSC0003DMP400005220 locus=PGSC0003DMG400002895 ID=PGSC0003DMT400007506.v4.03 annot-version=v4.03
Sequence

ATGGCTGAACGTGTTCTGACTCGTGTTCATAGTCTTCGTGAGCGTGTTGATGCAACTTTA
GCTGCTCACCGCAATGAGATACTGCTTTTTCTTTCAAGGATCGAAAGCCACGGAAAAGGG
ATCTTGAAACCTCATGAGCTTTTGGCTGAGTTCGATGCAATTCGCCAAGATGACAAAAAC
AAACTGAATGAACATGCATTTGAAGAACTCCTGAAATCCACTCAGGAAGCGATTGTTCTG
CCCCCTTGGGTTGCACTTGCTATTCGTTTGAGGCCTGGTGTCTGGGAATACATCCGTGTG
AACGTCAACGCACTAGTTGTTGAGGAGCTGTCCGTCCCTGAGTATTTGCAATTCAAGGAA
GAACTTGTTGACGGAGCCTCGAATGGAAATTTTGTTCTCGAGTTGGATTTTGAGCCTTTT
ACTGCATCCTTTCCTAAACCAACCCTCACCAAATCTATTGGAAATGGAGTTGAATTCCTC
AATAGGCACCTCTCTGCCAAAATGTTCCATGACAAGGAAAGCATGACCCCGCTTCTCGAA
TTTCTTCGCGCTCACCATTATAAGGGCAAGACAATGATGCTGAATGATAGGATACAGAAT
TCGAATACTCTTCAAAATGTCCTAAGGAAGGCAGAGGAATACCTCATTATGCTTCCCCCA
GATACTCCATATTTCGAATTCGAGCACAAGTTCCAAGAAATCGGATTGGAGAAGGGATGG
GGGGACACGGCGGAGCGTGTGCTAGAGATGGTATGCATGCTTCTTGATCTCCTTGAGGCT
CCTGACTCATGTACTCTTGAGAAGTTCTTGGGGAGAATTCCTATGGTTTTCAATGTGGTT
ATCCTTTCCCCTCATGGATATTTTGCCCAAGAAAATGTCTTGGGTTATCCCGACACCGGT
GGCCAGGTTGTCTACATTTTAGATCAAGTTCCCGCCTTGGAGCGTGAAATGCTTAAGCGC
ATAAAGGAGCAAGGACTTGATATCATCCCCCGTATTCTTATTGTTACTCGTCTGCTGCCC
GATGCAGTTGGAACCACTTGTGGTCAGAGGATTGAGAAGGTGTATGGAGCAGAACACTCA
CATATTCTTAGGGTCCCTTTTAGGACTGAGAAGGGCATTGTTCGCAAATGGATCTCTCGC
TTTGAAGTGTGGCCATACATGGAGACATTCATTGAGGATGTTGCAAAAGAAATTTCTGCA
GAACTGCAGGCCAAGCCAGATTTGATAATCGGTAACTACAGTGAGGGCAATCTTGCTGCT
TCTTTGCTAGCTCACAAGTTAGGCGTAACGCAGTGCACAATCGCTCATGCGTTGGAGAAA
ACAAAGTATCCAGATTCCGACATCTACTGGAAGAAATTTGATGAAAAATACCATTTCTCG
TCCCAGTTTACCGCTGATCTCATTGCAATGAATCACACTGATTTCATCATCACCAGCACC
TTCCAGGAGATAGCAGGAAGCAAGGACACTGTGGGACAATATGAGAGCCATATGGCATTC
ACAATGCCTGGATTGTACAGAGTTGTTCACGGCATTAATGTGTTCGACCCCAAATTCAAC
ATTGTCTCACCTGGAGCTGATATTAACCTCTACTTCTCGTACTCCGAAACGGAGAAGAGA
CTTACAGCATTTCACCCTGAAATTGATGAGCTGCTGTATAGTGATGTTGAGAATGACGAA
CATCTGTGCGTGCTCAAGGACAGGACTAAACCAATTTTATTCACAATGGCGAGGTTGGAT
CGTGTGAAGAATTTAACTGGACTTGTTGAGTGGTACGCCAAAAATCCACGGCTAAGGGGA
TTGGTTAACCTGGTTGTAGTTGGCGGAGATCGAAGGAAGGAATCCAAAGATTTGGAAGAG
CAGGCAGAGATGAAGAAGATGTATGAGCTAATTGAGACTCATAATTTGAATGGCCAATTC
AGATGGATTTCTTCCCAGATGAACCGAGTGAGGAATGGTGAGCTCTACCGATACATTGCT
GACACTAAGGGAGCTTTCGTTCAGCCTGCATTCTATGAGGCTTTTGGTCTGACTGTTGTC
GAAGCAATGACTTGTGGTTTGCCTACATTTGCAACTAATCACGGTGGTCCAGCTGAGATC
ATCGTTCATGGAAAGTCCGGCTTCCACATTGATCCATATCACGGTGAGCAAGCTGCTGAT
CTGCTAGCTGATTTCTTTGAGAAATGCAAGAAAGATCCTTCACATTGGGAAACCATTTCG
ATGGGTGGCCTGAAGCGCATCGAAGAGAAGTACACTTGGCAAATCTACTCCGAAAGGCTA
TTGACACTGGCTGCTGTTTATGGGTTCTGGAAACATGTTTCTAAGCTTGATCGTCTAGAA
ATCCGTCGCTATCTTGAAATGTTTTATGCTCTCAAGTACCGTAAGATGGCTGAAGCTGTT
CCATTGGCTGCTGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005220
PEP Infomation

pacid=37447337 transcript=PGSC0003DMT400007506 locus=PGSC0003DMG400002895 ID=PGSC0003DMT400007506.v4.03 annot-version=v4.03
Sequence

MAERVLTRVHSLRERVDATLAAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKN
KLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYIRVNVNALVVEELSVPEYLQFKE
ELVDGASNGNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLE
FLRAHHYKGKTMMLNDRIQNSNTLQNVLRKAEEYLIMLPPDTPYFEFEHKFQEIGLEKGW
GDTAERVLEMVCMLLDLLEAPDSCTLEKFLGRIPMVFNVVILSPHGYFAQENVLGYPDTG
GQVVYILDQVPALEREMLKRIKEQGLDIIPRILIVTRLLPDAVGTTCGQRIEKVYGAEHS
HILRVPFRTEKGIVRKWISRFEVWPYMETFIEDVAKEISAELQAKPDLIIGNYSEGNLAA
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSSQFTADLIAMNHTDFIITST
FQEIAGSKDTVGQYESHMAFTMPGLYRVVHGINVFDPKFNIVSPGADINLYFSYSETEKR
LTAFHPEIDELLYSDVENDEHLCVLKDRTKPILFTMARLDRVKNLTGLVEWYAKNPRLRG
LVNLVVVGGDRRKESKDLEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIA
DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAAD
LLADFFEKCKKDPSHWETISMGGLKRIEEKYTWQIYSERLLTLAAVYGFWKHVSKLDRLE
IRRYLEMFYALKYRKMAEAVPLAAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400007506
Transcript Infomation

pacid=37447337 locus=PGSC0003DMG400002895 ID=PGSC0003DMT400007506.v4.03 annot-version=v4.03
Sequence

ATGGCTGAACGTGTTCTGACTCGTGTTCATAGTCTTCGTGAGCGTGTTGATGCAACTTTA
GCTGCTCACCGCAATGAGATACTGCTTTTTCTTTCAAGGATCGAAAGCCACGGAAAAGGG
ATCTTGAAACCTCATGAGCTTTTGGCTGAGTTCGATGCAATTCGCCAAGATGACAAAAAC
AAACTGAATGAACATGCATTTGAAGAACTCCTGAAATCCACTCAGGAAGCGATTGTTCTG
CCCCCTTGGGTTGCACTTGCTATTCGTTTGAGGCCTGGTGTCTGGGAATACATCCGTGTG
AACGTCAACGCACTAGTTGTTGAGGAGCTGTCCGTCCCTGAGTATTTGCAATTCAAGGAA
GAACTTGTTGACGGAGCCTCGAATGGAAATTTTGTTCTCGAGTTGGATTTTGAGCCTTTT
ACTGCATCCTTTCCTAAACCAACCCTCACCAAATCTATTGGAAATGGAGTTGAATTCCTC
AATAGGCACCTCTCTGCCAAAATGTTCCATGACAAGGAAAGCATGACCCCGCTTCTCGAA
TTTCTTCGCGCTCACCATTATAAGGGCAAGACAATGATGCTGAATGATAGGATACAGAAT
TCGAATACTCTTCAAAATGTCCTAAGGAAGGCAGAGGAATACCTCATTATGCTTCCCCCA
GATACTCCATATTTCGAATTCGAGCACAAGTTCCAAGAAATCGGATTGGAGAAGGGATGG
GGGGACACGGCGGAGCGTGTGCTAGAGATGGTATGCATGCTTCTTGATCTCCTTGAGGCT
CCTGACTCATGTACTCTTGAGAAGTTCTTGGGGAGAATTCCTATGGTTTTCAATGTGGTT
ATCCTTTCCCCTCATGGATATTTTGCCCAAGAAAATGTCTTGGGTTATCCCGACACCGGT
GGCCAGGTTGTCTACATTTTAGATCAAGTTCCCGCCTTGGAGCGTGAAATGCTTAAGCGC
ATAAAGGAGCAAGGACTTGATATCATCCCCCGTATTCTTATTGTTACTCGTCTGCTGCCC
GATGCAGTTGGAACCACTTGTGGTCAGAGGATTGAGAAGGTGTATGGAGCAGAACACTCA
CATATTCTTAGGGTCCCTTTTAGGACTGAGAAGGGCATTGTTCGCAAATGGATCTCTCGC
TTTGAAGTGTGGCCATACATGGAGACATTCATTGAGGATGTTGCAAAAGAAATTTCTGCA
GAACTGCAGGCCAAGCCAGATTTGATAATCGGTAACTACAGTGAGGGCAATCTTGCTGCT
TCTTTGCTAGCTCACAAGTTAGGCGTAACGCAGTGCACAATCGCTCATGCGTTGGAGAAA
ACAAAGTATCCAGATTCCGACATCTACTGGAAGAAATTTGATGAAAAATACCATTTCTCG
TCCCAGTTTACCGCTGATCTCATTGCAATGAATCACACTGATTTCATCATCACCAGCACC
TTCCAGGAGATAGCAGGAAGCAAGGACACTGTGGGACAATATGAGAGCCATATGGCATTC
ACAATGCCTGGATTGTACAGAGTTGTTCACGGCATTAATGTGTTCGACCCCAAATTCAAC
ATTGTCTCACCTGGAGCTGATATTAACCTCTACTTCTCGTACTCCGAAACGGAGAAGAGA
CTTACAGCATTTCACCCTGAAATTGATGAGCTGCTGTATAGTGATGTTGAGAATGACGAA
CATCTGTGCGTGCTCAAGGACAGGACTAAACCAATTTTATTCACAATGGCGAGGTTGGAT
CGTGTGAAGAATTTAACTGGACTTGTTGAGTGGTACGCCAAAAATCCACGGCTAAGGGGA
TTGGTTAACCTGGTTGTAGTTGGCGGAGATCGAAGGAAGGAATCCAAAGATTTGGAAGAG
CAGGCAGAGATGAAGAAGATGTATGAGCTAATTGAGACTCATAATTTGAATGGCCAATTC
AGATGGATTTCTTCCCAGATGAACCGAGTGAGGAATGGTGAGCTCTACCGATACATTGCT
GACACTAAGGGAGCTTTCGTTCAGCCTGCATTCTATGAGGCTTTTGGTCTGACTGTTGTC
GAAGCAATGACTTGTGGTTTGCCTACATTTGCAACTAATCACGGTGGTCCAGCTGAGATC
ATCGTTCATGGAAAGTCCGGCTTCCACATTGATCCATATCACGGTGAGCAAGCTGCTGAT
CTGCTAGCTGATTTCTTTGAGAAATGCAAGAAAGATCCTTCACATTGGGAAACCATTTCG
ATGGGTGGCCTGAAGCGCATCGAAGAGAAGTACACTTGGCAAATCTACTCCGAAAGGCTA
TTGACACTGGCTGCTGTTTATGGGTTCTGGAAACATGTTTCTAAGCTTGATCGTCTAGAA
ATCCGTCGCTATCTTGAAATGTTTTATGCTCTCAAGTACCGTAAGATGGCTGAAGCTGTT
CCATTGGCTGCTGAGTGA