Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007448
CDS Infomation

pacid=37473272 polypeptide=PGSC0003DMP400005180 locus=PGSC0003DMG400002868 ID=PGSC0003DMT400007448.v4.03 annot-version=v4.03
Sequence

ATGGGAGCATGTGTATCGCGGCCAGATAGTTGTGTTGGAGGTAAATTGAAAGGTTCGAAT
AAGTTTAGGAAAAGAAGGGGAAGAAGAAGAAGGAAGAAATCTAGCTCACTTCACAAAATT
GATGAGTCATTTCCTTTGGATAACTACAATCCAACATTTCAGGGACGGATTGAGGAGGCA
TGGTTTGATTCCGCTGCAATATTTGAATCTGATTGCAGTGATGAAGATTTCCAGAGTGTT
CCTGATGATGTACTCTCTGTCAACAGCTTTGATTGTGGGCGGACTAGTGTAGCTTCTATC
AAAGATACTAACCATGGGGATGTTAATTTAAACCATGATGGACCTCACAGTGAGGTACGA
CCTGTTTTCCTTGATGAGATCTCGTCCTCTGAAAATATAGGTAGTGACAGGGAGGATGGT
TTGTTGGAGAACTGTGGAATTCTTTCAAACAACTGTCTGCCCTGTCTTACCTCCACTGTT
GTGCCTGTTGAGAAGAGATCTCTTAGCTCTAGTCCTCCAAGTTCAAGGAAGAAAGCGGAC
CTAAAGCTTCCCTTCAAATGGAAAGATGGAAATCCTTGTGCCACTCTACTTTCATCTAAA
ACCGTGCTTCAAAGGCCCATAGCTGGTATCCAAGTACCAGTTTGCCTGTTGGAGAATAAA
TTGCCTGATAGTTGGTCCCATATTGAACCAAATACCTTCAGGGTCCGGGGAGGAAACTAT
TTCAGGGACAAAAAGAAAGAGTTTGCGGCAAATAATGCTGCATATTATCCTTTTGGTGTT
GATGTATTTTTATCTCAAAGAAAAATTGATCATATTGCTCGACTTGTGGAACTTCCTGTC
ATTGAACACTCTGGGACACTTCCACCCATTCTTGTAGTGAATATTCAGGTACCACTATAT
CCTACTGCAATTTTTCAGGGTGAAACTGATGGTAAAGGAATGAGTTTTGTCTTGTACTTT
AAGCTTTCCGAAAGTTATGCAAAAGAACTTCCTTTTCATTTTCAAGAGAACATAAGAAGA
GTAATGGATGATGAAGTGGAAAAAGTGAAGGCTTTTCCAATGGATGGTAGTGTTCCCTTT
AGGGAAAGGTTGAAGATATTAGGTCGTGTAGCAAATGTGGAGGACCTTCGGTTAAGTGCA
GCAGAGAGGAAGCTTATGCAGGCGTACAATGAAAAACCTGTTCTTTCACGTCCTCAACAT
GAGTTCTATAAGGGAGAAAATTATTTTGAGATTGATATAGATATGCACAGATTCAGTTAC
ATCTCTAGGAAGGGTTGCGAAACATTCCTAGATAGGCTAAAGCTATGCTCCTTGGATGTA
GGCCTCACAATTCAGGGTAACAAAATTGAAGAATTGCCGGAGCAGATCTTATGTTGTATA
CGGTTAAATGAAATCGACTATGTGAATTATCAGCAACTCGGGGTTAATAATGAAACCCCT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400005180
PEP Infomation

pacid=37473272 transcript=PGSC0003DMT400007448 locus=PGSC0003DMG400002868 ID=PGSC0003DMT400007448.v4.03 annot-version=v4.03
Sequence

MGACVSRPDSCVGGKLKGSNKFRKRRGRRRRKKSSSLHKIDESFPLDNYNPTFQGRIEEA
WFDSAAIFESDCSDEDFQSVPDDVLSVNSFDCGRTSVASIKDTNHGDVNLNHDGPHSEVR
PVFLDEISSSENIGSDREDGLLENCGILSNNCLPCLTSTVVPVEKRSLSSSPPSSRKKAD
LKLPFKWKDGNPCATLLSSKTVLQRPIAGIQVPVCLLENKLPDSWSHIEPNTFRVRGGNY
FRDKKKEFAANNAAYYPFGVDVFLSQRKIDHIARLVELPVIEHSGTLPPILVVNIQVPLY
PTAIFQGETDGKGMSFVLYFKLSESYAKELPFHFQENIRRVMDDEVEKVKAFPMDGSVPF
RERLKILGRVANVEDLRLSAAERKLMQAYNEKPVLSRPQHEFYKGENYFEIDIDMHRFSY
ISRKGCETFLDRLKLCSLDVGLTIQGNKIEELPEQILCCIRLNEIDYVNYQQLGVNNETP
*

Transcript Sequence

Transcript ID

PGSC0003DMT400007448
Transcript Infomation

pacid=37473272 locus=PGSC0003DMG400002868 ID=PGSC0003DMT400007448.v4.03 annot-version=v4.03
Sequence

ATGGGAGCATGTGTATCGCGGCCAGATAGTTGTGTTGGAGGTAAATTGAAAGGTTCGAAT
AAGTTTAGGAAAAGAAGGGGAAGAAGAAGAAGGAAGAAATCTAGCTCACTTCACAAAATT
GATGAGTCATTTCCTTTGGATAACTACAATCCAACATTTCAGGGACGGATTGAGGAGGCA
TGGTTTGATTCCGCTGCAATATTTGAATCTGATTGCAGTGATGAAGATTTCCAGAGTGTT
CCTGATGATGTACTCTCTGTCAACAGCTTTGATTGTGGGCGGACTAGTGTAGCTTCTATC
AAAGATACTAACCATGGGGATGTTAATTTAAACCATGATGGACCTCACAGTGAGGTACGA
CCTGTTTTCCTTGATGAGATCTCGTCCTCTGAAAATATAGGTAGTGACAGGGAGGATGGT
TTGTTGGAGAACTGTGGAATTCTTTCAAACAACTGTCTGCCCTGTCTTACCTCCACTGTT
GTGCCTGTTGAGAAGAGATCTCTTAGCTCTAGTCCTCCAAGTTCAAGGAAGAAAGCGGAC
CTAAAGCTTCCCTTCAAATGGAAAGATGGAAATCCTTGTGCCACTCTACTTTCATCTAAA
ACCGTGCTTCAAAGGCCCATAGCTGGTATCCAAGTACCAGTTTGCCTGTTGGAGAATAAA
TTGCCTGATAGTTGGTCCCATATTGAACCAAATACCTTCAGGGTCCGGGGAGGAAACTAT
TTCAGGGACAAAAAGAAAGAGTTTGCGGCAAATAATGCTGCATATTATCCTTTTGGTGTT
GATGTATTTTTATCTCAAAGAAAAATTGATCATATTGCTCGACTTGTGGAACTTCCTGTC
ATTGAACACTCTGGGACACTTCCACCCATTCTTGTAGTGAATATTCAGGTACCACTATAT
CCTACTGCAATTTTTCAGGGTGAAACTGATGGTAAAGGAATGAGTTTTGTCTTGTACTTT
AAGCTTTCCGAAAGTTATGCAAAAGAACTTCCTTTTCATTTTCAAGAGAACATAAGAAGA
GTAATGGATGATGAAGTGGAAAAAGTGAAGGCTTTTCCAATGGATGGTAGTGTTCCCTTT
AGGGAAAGGTTGAAGATATTAGGTCGTGTAGCAAATGTGGAGGACCTTCGGTTAAGTGCA
GCAGAGAGGAAGCTTATGCAGGCGTACAATGAAAAACCTGTTCTTTCACGTCCTCAACAT
GAGTTCTATAAGGGAGAAAATTATTTTGAGATTGATATAGATATGCACAGATTCAGTTAC
ATCTCTAGGAAGGGTTGCGAAACATTCCTAGATAGGCTAAAGCTATGCTCCTTGGATGTA
GGCCTCACAATTCAGGGTAACAAAATTGAAGAATTGCCGGAGCAGATCTTATGTTGTATA
CGGTTAAATGAAATCGACTATGTGAATTATCAGCAACTCGGGGTTAATAATGAAACCCCT
TGA