Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007445
CDS Infomation

pacid=37474030 polypeptide=PGSC0003DMP400005178 locus=PGSC0003DMG400002867 ID=PGSC0003DMT400007445.v4.03 annot-version=v4.03
Sequence

ATGACTGTTGATTACTATAAGACACTGAAAGTGTCACGTAATGCGAGTGAAGAAGATTTG
AAGAAATCGTATAAGAGATTGGCCATGAAATGGCATCCGGATAAGAATAGTGAGAATAAG
AAGGAAGCTGAAGCGAAATTCAAGCAGATATCTGAGGCTTATGATGTGCTGAGTGATCCT
CAGAAGCGTCAGATCTATGATATATATGGTGATGAGGCACTGAAATCTGGTCAATTCGAT
CCATCCTCACCTAGTGATAGAAGAGGATTTAAGTTCAATTCGCGTGATGCGGAAGATATT
TTCGCGGAATTTTTTGGTGGATCGGATGGGTATAGTAGGAGTACCGGTGGTACTGTACGG
ATTCGGAAAGCTGCGCCGGTGGAGAACAATTTGCCGTGTAGCTTGGAGGAGTTATACAAG
GGTTCTAAGAGGAAAATGAAGATTTCAAGGATTGTTCTTGATGGCACTGGTAAGCCCACA
ACTATTGAAGAGGTCTTGGCAATACACATTAAACCTGGTTGGAAGAAAGGCACAAAAATT
ACTTTTCCAGAGAAAGGGAACCATGAGCCTGGAGCTGCACCTGGTGATCTTATTTTTGTA
ATAGATGAAAAGCCACATGACGTTTTCAAGAGAGATGGGAATGATCTAGTGATCAATCAG
AAAATCTCATTAGTAGATGCTCTCGCTGGGAAAACTATCAACCTGACTGCTTTGGATGGA
AGGGAACTCACTATACCAATCACAGATGTTGTTAAACCAGGACATGAGCAGAAAATCCCG
AATGAAGGAATGCCAATATCGAAAGAACCTGGAAAGAAAGGAAATTTGAGGATCAAGTTT
GAGGTTAAATTCCCGTCAAGGCTTAGTTCAGATCAGAAATGTGATATCAGAAGAGTATTG
GGCAGAACTGCCGACTACCATGGTTATACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005178
PEP Infomation

pacid=37474030 transcript=PGSC0003DMT400007445 locus=PGSC0003DMG400002867 ID=PGSC0003DMT400007445.v4.03 annot-version=v4.03
Sequence

MTVDYYKTLKVSRNASEEDLKKSYKRLAMKWHPDKNSENKKEAEAKFKQISEAYDVLSDP
QKRQIYDIYGDEALKSGQFDPSSPSDRRGFKFNSRDAEDIFAEFFGGSDGYSRSTGGTVR
IRKAAPVENNLPCSLEELYKGSKRKMKISRIVLDGTGKPTTIEEVLAIHIKPGWKKGTKI
TFPEKGNHEPGAAPGDLIFVIDEKPHDVFKRDGNDLVINQKISLVDALAGKTINLTALDG
RELTIPITDVVKPGHEQKIPNEGMPISKEPGKKGNLRIKFEVKFPSRLSSDQKCDIRRVL
GRTADYHGYT*

Transcript Sequence

Transcript ID

PGSC0003DMT400007445
Transcript Infomation

pacid=37474030 locus=PGSC0003DMG400002867 ID=PGSC0003DMT400007445.v4.03 annot-version=v4.03
Sequence

ATGACTGTTGATTACTATAAGACACTGAAAGTGTCACGTAATGCGAGTGAAGAAGATTTG
AAGAAATCGTATAAGAGATTGGCCATGAAATGGCATCCGGATAAGAATAGTGAGAATAAG
AAGGAAGCTGAAGCGAAATTCAAGCAGATATCTGAGGCTTATGATGTGCTGAGTGATCCT
CAGAAGCGTCAGATCTATGATATATATGGTGATGAGGCACTGAAATCTGGTCAATTCGAT
CCATCCTCACCTAGTGATAGAAGAGGATTTAAGTTCAATTCGCGTGATGCGGAAGATATT
TTCGCGGAATTTTTTGGTGGATCGGATGGGTATAGTAGGAGTACCGGTGGTACTGTACGG
ATTCGGAAAGCTGCGCCGGTGGAGAACAATTTGCCGTGTAGCTTGGAGGAGTTATACAAG
GGTTCTAAGAGGAAAATGAAGATTTCAAGGATTGTTCTTGATGGCACTGGTAAGCCCACA
ACTATTGAAGAGGTCTTGGCAATACACATTAAACCTGGTTGGAAGAAAGGCACAAAAATT
ACTTTTCCAGAGAAAGGGAACCATGAGCCTGGAGCTGCACCTGGTGATCTTATTTTTGTA
ATAGATGAAAAGCCACATGACGTTTTCAAGAGAGATGGGAATGATCTAGTGATCAATCAG
AAAATCTCATTAGTAGATGCTCTCGCTGGGAAAACTATCAACCTGACTGCTTTGGATGGA
AGGGAACTCACTATACCAATCACAGATGTTGTTAAACCAGGACATGAGCAGAAAATCCCG
AATGAAGGAATGCCAATATCGAAAGAACCTGGAAAGAAAGGAAATTTGAGGATCAAGTTT
GAGGTTAAATTCCCGTCAAGGCTTAGTTCAGATCAGAAATGTGATATCAGAAGAGTATTG
GGCAGAACTGCCGACTACCATGGTTATACTTGA