Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007441
CDS Infomation

pacid=37476149 polypeptide=PGSC0003DMP400005176 locus=PGSC0003DMG400002865 ID=PGSC0003DMT400007441.v4.03 annot-version=v4.03
Sequence

ATGGAAGTGGAAAGCCAAAGCAAACTAATTAGCACAAATTGGGAAGGCTATGTAGATTGG
AGAAATAGGCCAGCACTTATCAATAGACATGGTGGCTTGGTGGCTTCATCATTTGTCTTA
GTGGTGGAGGTGTTGGAGAATTTGGCATATCTAGCAAATGCAAGCAACTTGGTGATGTAC
TTGTCTGAGTACATGCACTATTCACCAACCAACTCAGCAAATTGTGTGACTAACTTTATG
GGAACAGCCTTTCTACTTGCTCTTCTTGGTGGCTTCTTATCTGATGCTTTCTTCACAACT
TATCACATCTATTTGATCAGTGCATTCATTGAATTTCTGGGTCTAGTGGTACTCACAATA
CAAGCTCGATCGGACTCGTTGAAACCATCAAAGTGCAAGCCAGAGCTGCCCTGCGAACAA
GTCCGCGGTGCACAAGCTGCAATGTTGTTTATAGGCCTTTACTTAGTGGCATTGGGTGTT
GGAGGTATAAAGGGATCATTGCCACCCCATGGAGCTGAACAATTTGATGGAGAAACACCA
CAAGGGAGGAAACAAAGATCAACTTTCTTCAATTACTTTGTGTTTTGCCTCTCATGTGGT
GGCCTCATTGCAGTCACATTTGTTGTCTGGGTTGAAGACAATAAAGGTTGGCAATGGGGA
TTTGGGATTTCAACTCTCGCTATATTATTATCGATCCCAATATTCCTTGCTGGTTCGCCT
TTCTATAGGAATAAGATCCCTCGCGGAAGTCCTCTAACTACTATATCTAAGGTTCTTATT
GCTGCAATGCTAAACTCTTGTGCATCGAGAAATTCAAGTAGTGTAATAGCAAGTCTGGGA
TCAAGCCCTTCGACAATTCCAGTACTATCGAATGAAGATGAGGAAATTACTTCAAACAAC
AAAAATGTAGTAGAATCAATCGATATACCATCGAAAAGTCTGAGATTTCTTAATCGAGCA
GTTGTAAAGAAACCCGCAGCAGTTTCTGGTGTGCTGAAATGTTCGGTACAGGAAGTGGAA
GAAGTGAAGATTGTGGTGAAAATTCTCCCGATTTTCGCGTGTACTATCATGCTCAACTGT
TGCTTAGCTCAACTATCCACATTCTCAGTTCAACAAGCAGCAACTATGAATACAAAATTT
GGCAAGTTAAAAGTACCACCAGCTTCACTTCCTATTTTCCCTGTACTTTTCATCATGATC
CTGGCACCAATTTTCGACTACTTCATCGTCCCATTTGCTCGTAAGGTAACCAAGACAGAG
ATGGGAATCACTCACCTACAACGTATAGGAATTGGATTGTTCCTCTCTGTTATAGCTATG
GCAATTGCAGCTCTTGTTGAAATCAAACGGAAAAGAGTAGCTACTGACTCGTCACTACTC
GAATCTTCCAAGCCATTACCTATAACGTTCTTTTGGATCGCGATTCAGTACTTATTTCTT
GGATCAGCTGATTTGTTCACTCTAGCTGGACTACTAGAATTCTGTTTCTCAGAAGCACCA
TTTAGTATGAGATCATTAGCAACATCACTCTCTTGGGCTTCATTAGCAATAGGATACTAT
CTAAGCACAGCGATAGTATCCATTGTCAATAGTGTCACAGGAAATTCAAAGCATCAACCA
TGGCTAGCCGGCGAAAACTTGAATCACTTCCATTTGGAGAGATTTTACTGGCTAATGTGC
ATACTCAGCGCGCTGAATTTCATACATTATTTGTATTGGGCTAGAAAATACAAGTACAGA
TCAGTATCCTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005176
PEP Infomation

pacid=37476149 transcript=PGSC0003DMT400007441 locus=PGSC0003DMG400002865 ID=PGSC0003DMT400007441.v4.03 annot-version=v4.03
Sequence

MEVESQSKLISTNWEGYVDWRNRPALINRHGGLVASSFVLVVEVLENLAYLANASNLVMY
LSEYMHYSPTNSANCVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAFIEFLGLVVLTI
QARSDSLKPSKCKPELPCEQVRGAQAAMLFIGLYLVALGVGGIKGSLPPHGAEQFDGETP
QGRKQRSTFFNYFVFCLSCGGLIAVTFVVWVEDNKGWQWGFGISTLAILLSIPIFLAGSP
FYRNKIPRGSPLTTISKVLIAAMLNSCASRNSSSVIASLGSSPSTIPVLSNEDEEITSNN
KNVVESIDIPSKSLRFLNRAVVKKPAAVSGVLKCSVQEVEEVKIVVKILPIFACTIMLNC
CLAQLSTFSVQQAATMNTKFGKLKVPPASLPIFPVLFIMILAPIFDYFIVPFARKVTKTE
MGITHLQRIGIGLFLSVIAMAIAALVEIKRKRVATDSSLLESSKPLPITFFWIAIQYLFL
GSADLFTLAGLLEFCFSEAPFSMRSLATSLSWASLAIGYYLSTAIVSIVNSVTGNSKHQP
WLAGENLNHFHLERFYWLMCILSALNFIHYLYWARKYKYRSVSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400007441
Transcript Infomation

pacid=37476149 locus=PGSC0003DMG400002865 ID=PGSC0003DMT400007441.v4.03 annot-version=v4.03
Sequence

ATGGAAGTGGAAAGCCAAAGCAAACTAATTAGCACAAATTGGGAAGGCTATGTAGATTGG
AGAAATAGGCCAGCACTTATCAATAGACATGGTGGCTTGGTGGCTTCATCATTTGTCTTA
GTGGTGGAGGTGTTGGAGAATTTGGCATATCTAGCAAATGCAAGCAACTTGGTGATGTAC
TTGTCTGAGTACATGCACTATTCACCAACCAACTCAGCAAATTGTGTGACTAACTTTATG
GGAACAGCCTTTCTACTTGCTCTTCTTGGTGGCTTCTTATCTGATGCTTTCTTCACAACT
TATCACATCTATTTGATCAGTGCATTCATTGAATTTCTGGGTCTAGTGGTACTCACAATA
CAAGCTCGATCGGACTCGTTGAAACCATCAAAGTGCAAGCCAGAGCTGCCCTGCGAACAA
GTCCGCGGTGCACAAGCTGCAATGTTGTTTATAGGCCTTTACTTAGTGGCATTGGGTGTT
GGAGGTATAAAGGGATCATTGCCACCCCATGGAGCTGAACAATTTGATGGAGAAACACCA
CAAGGGAGGAAACAAAGATCAACTTTCTTCAATTACTTTGTGTTTTGCCTCTCATGTGGT
GGCCTCATTGCAGTCACATTTGTTGTCTGGGTTGAAGACAATAAAGGTTGGCAATGGGGA
TTTGGGATTTCAACTCTCGCTATATTATTATCGATCCCAATATTCCTTGCTGGTTCGCCT
TTCTATAGGAATAAGATCCCTCGCGGAAGTCCTCTAACTACTATATCTAAGGTTCTTATT
GCTGCAATGCTAAACTCTTGTGCATCGAGAAATTCAAGTAGTGTAATAGCAAGTCTGGGA
TCAAGCCCTTCGACAATTCCAGTACTATCGAATGAAGATGAGGAAATTACTTCAAACAAC
AAAAATGTAGTAGAATCAATCGATATACCATCGAAAAGTCTGAGATTTCTTAATCGAGCA
GTTGTAAAGAAACCCGCAGCAGTTTCTGGTGTGCTGAAATGTTCGGTACAGGAAGTGGAA
GAAGTGAAGATTGTGGTGAAAATTCTCCCGATTTTCGCGTGTACTATCATGCTCAACTGT
TGCTTAGCTCAACTATCCACATTCTCAGTTCAACAAGCAGCAACTATGAATACAAAATTT
GGCAAGTTAAAAGTACCACCAGCTTCACTTCCTATTTTCCCTGTACTTTTCATCATGATC
CTGGCACCAATTTTCGACTACTTCATCGTCCCATTTGCTCGTAAGGTAACCAAGACAGAG
ATGGGAATCACTCACCTACAACGTATAGGAATTGGATTGTTCCTCTCTGTTATAGCTATG
GCAATTGCAGCTCTTGTTGAAATCAAACGGAAAAGAGTAGCTACTGACTCGTCACTACTC
GAATCTTCCAAGCCATTACCTATAACGTTCTTTTGGATCGCGATTCAGTACTTATTTCTT
GGATCAGCTGATTTGTTCACTCTAGCTGGACTACTAGAATTCTGTTTCTCAGAAGCACCA
TTTAGTATGAGATCATTAGCAACATCACTCTCTTGGGCTTCATTAGCAATAGGATACTAT
CTAAGCACAGCGATAGTATCCATTGTCAATAGTGTCACAGGAAATTCAAAGCATCAACCA
TGGCTAGCCGGCGAAAACTTGAATCACTTCCATTTGGAGAGATTTTACTGGCTAATGTGC
ATACTCAGCGCGCTGAATTTCATACATTATTTGTATTGGGCTAGAAAATACAAGTACAGA
TCAGTATCCTCTTAA