Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007428
CDS Infomation

pacid=37475044 polypeptide=PGSC0003DMP400005167 locus=PGSC0003DMG401002858 ID=PGSC0003DMT400007428.v4.03 annot-version=v4.03
Sequence

ATGTCAAGTGCCTTGGCTAATGGGCTGGCTGGAGCTGGTGGGGGCATAATTGCACAAATA
ATTACTTACCCCCTCCAAACTGTCAATACACGGCAGCAGACTGAGAGGGTCTCGAGAGAG
GGCCGTGATTCTCGTGGCAGTGCCCTGTTTCAAATCTTACAGGTTGTTAGAAGCGAAGGC
TTGCCAGGGCTTTACAGTGGCCTGAAGCCTTCTCTGCTTGGAACTGCTGTGTCACAGGGT
GTCTACTACTATTTTTACCAGGTTTTTAAGAACAGGGCTGAGGCTATAGCAGCTGCAAAT
AAGAAAAGAGGCCGAGGGGATGGTTCTGTTGGGATGCTTTCTTGGCTCGTTGTGGCAGCT
CTTGCAGGTTCAGTAAATGTATTGTTGACAAACCCTATATGGGTTCTAGTTACTCGTATG
CAGACTCATACACAAGCAGAAAGGAAAATCGTGGAGGCAAAAAAGGAAACCCTATTAAAA
GAAGCTTCTCAAAGTGTCTTAACAGCTTCTTCCTTGGAAGTACAACTCGCTGAGCTTGAT
TCATTGAAACCTCATCCTTACGGGACATTGCAAGCAGCACGGGAAGTTTATAATGAATCA
GGAGTTACAGGATTCTGGAAAGGAGTCATCCCAGCATTGATCATGGTGTCTAATCCCTCG
ATTCAGTTCATGATTATTGAGAGTTTGTCGAAGCAGTTAAGGGCTAAACGTGCTGCAAAG
AATAAAGACCAGCAGAATATAACTGCTTTGGAGGTTTTTGTTATCGGAGCCTTTGCTAAA
CTTGGAGCAACTGTCTGCACATATCCATTGTTGGTTGTGAAGTCAAGGCTTCAAGCAAAG
CAGGAGATTAGTGGAAACGTCTCATTACGATATTCAGGTACAGTCGATGCTATTATTAAG
ATGATTCATCATGAAGGATTCAGATGCTTCTATCAGGGAATGCGCACAAAGATAGTGCAG
AGCGTCTTTGCAGCCTCCGTACTTTTCATGGTGAAGGAAGAGCTCGTCAAAGTCTATGCT
GTTTTGGCTAACAAGAGTAAGGTTAATGTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400005167
PEP Infomation

pacid=37475044 transcript=PGSC0003DMT400007428 locus=PGSC0003DMG401002858 ID=PGSC0003DMT400007428.v4.03 annot-version=v4.03
Sequence

MSSALANGLAGAGGGIIAQIITYPLQTVNTRQQTERVSREGRDSRGSALFQILQVVRSEG
LPGLYSGLKPSLLGTAVSQGVYYYFYQVFKNRAEAIAAANKKRGRGDGSVGMLSWLVVAA
LAGSVNVLLTNPIWVLVTRMQTHTQAERKIVEAKKETLLKEASQSVLTASSLEVQLAELD
SLKPHPYGTLQAAREVYNESGVTGFWKGVIPALIMVSNPSIQFMIIESLSKQLRAKRAAK
NKDQQNITALEVFVIGAFAKLGATVCTYPLLVVKSRLQAKQEISGNVSLRYSGTVDAIIK
MIHHEGFRCFYQGMRTKIVQSVFAASVLFMVKEELVKVYAVLANKSKVNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400007428
Transcript Infomation

pacid=37475044 locus=PGSC0003DMG401002858 ID=PGSC0003DMT400007428.v4.03 annot-version=v4.03
Sequence

ATGTCAAGTGCCTTGGCTAATGGGCTGGCTGGAGCTGGTGGGGGCATAATTGCACAAATA
ATTACTTACCCCCTCCAAACTGTCAATACACGGCAGCAGACTGAGAGGGTCTCGAGAGAG
GGCCGTGATTCTCGTGGCAGTGCCCTGTTTCAAATCTTACAGGTTGTTAGAAGCGAAGGC
TTGCCAGGGCTTTACAGTGGCCTGAAGCCTTCTCTGCTTGGAACTGCTGTGTCACAGGGT
GTCTACTACTATTTTTACCAGGTTTTTAAGAACAGGGCTGAGGCTATAGCAGCTGCAAAT
AAGAAAAGAGGCCGAGGGGATGGTTCTGTTGGGATGCTTTCTTGGCTCGTTGTGGCAGCT
CTTGCAGGTTCAGTAAATGTATTGTTGACAAACCCTATATGGGTTCTAGTTACTCGTATG
CAGACTCATACACAAGCAGAAAGGAAAATCGTGGAGGCAAAAAAGGAAACCCTATTAAAA
GAAGCTTCTCAAAGTGTCTTAACAGCTTCTTCCTTGGAAGTACAACTCGCTGAGCTTGAT
TCATTGAAACCTCATCCTTACGGGACATTGCAAGCAGCACGGGAAGTTTATAATGAATCA
GGAGTTACAGGATTCTGGAAAGGAGTCATCCCAGCATTGATCATGGTGTCTAATCCCTCG
ATTCAGTTCATGATTATTGAGAGTTTGTCGAAGCAGTTAAGGGCTAAACGTGCTGCAAAG
AATAAAGACCAGCAGAATATAACTGCTTTGGAGGTTTTTGTTATCGGAGCCTTTGCTAAA
CTTGGAGCAACTGTCTGCACATATCCATTGTTGGTTGTGAAGTCAAGGCTTCAAGCAAAG
CAGGAGATTAGTGGAAACGTCTCATTACGATATTCAGGTACAGTCGATGCTATTATTAAG
ATGATTCATCATGAAGGATTCAGATGCTTCTATCAGGGAATGCGCACAAAGATAGTGCAG
AGCGTCTTTGCAGCCTCCGTACTTTTCATGGTGAAGGAAGAGCTCGTCAAAGTCTATGCT
GTTTTGGCTAACAAGAGTAAGGTTAATGTATAG