Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007414
CDS Infomation

pacid=37475620 polypeptide=PGSC0003DMP400005156 locus=PGSC0003DMG400002850 ID=PGSC0003DMT400007414.v4.03 annot-version=v4.03
Sequence

ATGGATTGGAGTAAAAGGTCGGGACAGTCTGAAGTTCCAACTTTCATTAATGATCTCTGT
GATCAACCAGTTGCGGATTCAGAAAGTTTTATTGTTGTTCATGGAGCAGGTTCCTTTGGA
CACTTTCAAGCTAGCAAGTCAGGGGTTCACAAGGGTGGACTAAGTCGGCCTCTTGTCAAG
GCTGGTTTTGTTGCAACAAGAATTTCAGTCACATCCCTCAATCTTGAAATCGTGAGATCC
CTAGCAAGAGAGGGTATTCCTTCCATCGGAATGTCTCCATTCTCATGTGGTTGGTCAACA
TGTCAAAGAAATATGACGGAGGCTGACATTTCCATGGTCATTAAAGCTATTGATGCTGGT
TTTATACCTGTTCTGCATGGAGATGCAGTTCTGGATACATTACAGGAGTGCACTATTCTG
AGTGGAGACATGATAATACGTCATTTAGCAGCTGAACTAAAGCCAGAGTTTGTTGTTTTT
CTTACAGATGTTCTTGGTGTATATGATCGTCCACCAGTAGAACCTGGCGCTGTACTTATC
CGGGAAATAGCTGTACGTGAAGATGGAAGCTGGTCGGTAGTGAAACCTAAACTAGAAGAT
ACAAGCAAGCCTGTTGAATTCACGGTAGCTGCACATGATACAACTGGTGGGATGGTAACA
AAAATAACAGAAGCTGCCATGATTGCGAAGCTTGGGATTGATGTCTACATAACTAAGGCA
GGAACAGACCATTCAGTGAAAGCCCTTAGTGGATTCTTGAAGGGTGGCATACCTGATGAC
TGGCTCGGAACAGCCATTCGTTACATGAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005156
PEP Infomation

pacid=37475620 transcript=PGSC0003DMT400007414 locus=PGSC0003DMG400002850 ID=PGSC0003DMT400007414.v4.03 annot-version=v4.03
Sequence

MDWSKRSGQSEVPTFINDLCDQPVADSESFIVVHGAGSFGHFQASKSGVHKGGLSRPLVK
AGFVATRISVTSLNLEIVRSLAREGIPSIGMSPFSCGWSTCQRNMTEADISMVIKAIDAG
FIPVLHGDAVLDTLQECTILSGDMIIRHLAAELKPEFVVFLTDVLGVYDRPPVEPGAVLI
REIAVREDGSWSVVKPKLEDTSKPVEFTVAAHDTTGGMVTKITEAAMIAKLGIDVYITKA
GTDHSVKALSGFLKGGIPDDWLGTAIRYMS*

Transcript Sequence

Transcript ID

PGSC0003DMT400007414
Transcript Infomation

pacid=37475620 locus=PGSC0003DMG400002850 ID=PGSC0003DMT400007414.v4.03 annot-version=v4.03
Sequence

ATGGATTGGAGTAAAAGGTCGGGACAGTCTGAAGTTCCAACTTTCATTAATGATCTCTGT
GATCAACCAGTTGCGGATTCAGAAAGTTTTATTGTTGTTCATGGAGCAGGTTCCTTTGGA
CACTTTCAAGCTAGCAAGTCAGGGGTTCACAAGGGTGGACTAAGTCGGCCTCTTGTCAAG
GCTGGTTTTGTTGCAACAAGAATTTCAGTCACATCCCTCAATCTTGAAATCGTGAGATCC
CTAGCAAGAGAGGGTATTCCTTCCATCGGAATGTCTCCATTCTCATGTGGTTGGTCAACA
TGTCAAAGAAATATGACGGAGGCTGACATTTCCATGGTCATTAAAGCTATTGATGCTGGT
TTTATACCTGTTCTGCATGGAGATGCAGTTCTGGATACATTACAGGAGTGCACTATTCTG
AGTGGAGACATGATAATACGTCATTTAGCAGCTGAACTAAAGCCAGAGTTTGTTGTTTTT
CTTACAGATGTTCTTGGTGTATATGATCGTCCACCAGTAGAACCTGGCGCTGTACTTATC
CGGGAAATAGCTGTACGTGAAGATGGAAGCTGGTCGGTAGTGAAACCTAAACTAGAAGAT
ACAAGCAAGCCTGTTGAATTCACGGTAGCTGCACATGATACAACTGGTGGGATGGTAACA
AAAATAACAGAAGCTGCCATGATTGCGAAGCTTGGGATTGATGTCTACATAACTAAGGCA
GGAACAGACCATTCAGTGAAAGCCCTTAGTGGATTCTTGAAGGGTGGCATACCTGATGAC
TGGCTCGGAACAGCCATTCGTTACATGAGCTGA