Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007407
CDS Infomation

pacid=37472126 polypeptide=PGSC0003DMP400005151 locus=PGSC0003DMG400002849 ID=PGSC0003DMT400007407.v4.03 annot-version=v4.03
Sequence

ATGGTAGCACAAGCCCATTGTAAAGGCTACGTACCAGCTTATTACTCCATGAGCTACCTT
AGCGAGGATTTAAACAATAGATGGCCCCTACATTATGGAGAGAAAATCTTCACAAACGCT
CAATACTGTAATGGTTTCATGCCAAGGACTACGATAGATTCAGATCCTGGATATGATAAG
GATGTTCTAAAGCAGAAAATACTTGAACACGAGGAAACATTCAAGAATCAGGTATTTGAA
CTTCATCGCCTTTACAGAACTCAGAGGGACATGATGTATGACATTAAAAGGACGGAATTG
CATAGACCTTGGACATCAATGGAGCCATCATCTTCATCAAACATTCTTGGATCCCATCTA
CTACCTAAAGATGCTTGGAAAGGCCATACCAACAGCTTCCCCTTTGCAAATTCAAGTTAT
GCTAGACCATCTATGTCTGGTACTGAAATTGTAAATTCTCCATTCAGTTCTTCAAAAGCG
AATGATGTACAGTCTGGTCACGGTCAAATGCATAATGGTTGCTCTTCAAAGATCTGTGAA
TCTTTGGATGCCAGGCCCTCAAAATTACGGAAGAAGATGTTCGATCTTCAACTTCCAGCT
GATGAGTACTTAGATACTGATGAAGTTGAGCAGTTGCGATATGATGAAGGATCGTTCTAT
CCAAGTTCCCGTGCTAATGGAAATGATAAAGTTTCCCAAGAGAGTTGTACAAGATTATTC
CCTGGTGCTGGTACAAAGAGTGATAAAAAAGATGCTTCAGCATCCCATTCGTGTTTCAGA
AGCTCAGTCAGGTTGGCTGATCTCAATAAACCAGCTCAGCCTGAAGAAGCAATCTCATTG
CCTGTTGATTTTCTTGGATATGGTAATAGTCATAAGGAGACAAGAAGGCTAAATGCTTCC
GCTAATTCAAATCCAGCATTTGTGGCTTTGCCTAGAGAAACCACATGGAACTCCCATCAT
ACAAGCCTTAGTAAAGGCAAAGAGAGGGACTGGTTCCCTTCCACATATGAAACAGGTAAA
GTCGAAGGTAGCTTGACTCCAGTACCTCATAGTTTTTCACACAACAAGTTCCCTACACCA
CGCCAACTGGCACAAGTAATGCTTGATAAAGCCTTTCTACGTCCTGGGGTTCAATCACCT
CACTATTTCAAGGATGACCTATGGAAAGAGAGAGTGGGGCATGGTCCAGAGACCTTCCAC
GGAAATCATGAGAAGTCCGAATATACCTATGGGAGACCATTTATCACTTCTCGGACAGCT
AGTCCATATCCATTCGCTAATTCCTCAGAGTTTACCGATTCATGGTCGCACACACTCTCT
TCTTGGGGTAAACCAAGTGGCTTTGCTGCAAGGCTATCATCAGGACATACAAACCCGTCA
TTGAACTCATGTGCCATGGTTGGTAAGAGCCCGAAATCACCTCAATGCCATGATATTTTT
GGAGACAAGTGGCATATTGATGGCAGTTCTAGATCAAATTTAGGTGAGGCTACTAATTTC
TCCATCAGGAATGGGTTTTACCATGGGTCCTCATCTGGGCCCAAAGAATCAACCCGTTGG
TTCTCTGTTGCTTTTGACTCTGAGAAGCAAAACAAGAGTGACAATTTGACATCTGACCGC
TCCTTTAACAATGAATGTGAGAAATTTCCTATTACCTCCAATAATATGGACTTGATATCA
GAAAAAGGTTTCGATTTGAATGTACTATCAAAGGATTCAGTAAATGAGGAACTTGCCAGC
AGGGATCTTGAGTTGGTTGATGAAAAACGAGAGCCTCAAGACTGTAAACCAGTGTTGCCG
TGGCTTAAAGCTAAACCAAGTTTCAAAAATGAGAGTACAGATACCATGAATGGAATGGTT
GAAGCCTACACAAACTCACCTATCTGTGGAAATGGCCCATTGGAAAGTTTCAGCGACGTC
TGCAATGCGCAGAATATTGCACCAGCAATGATAGATCTTAACATGAAGGCCACAAAAGAG
TTGGGGGAAACCCGAAGTGTCAGGAAAATTCTGGGGGCTCCAATTCCTGAAATTCCATGT
GCTTCCAAAAATGAGTCGTCTTCATTTGTTTCCACATCTGCTACTCTTTGTTCCTCACCC
ATAGAAGAAAATAGCAGACACGAAGAGAGGAGAATAGTGATTGACATTAACATAGCTTGT
GACCTTTCTATGGTTGAGCCCGAGAAACAGGTTGTCATGGAAGCAGTTGTTGCTGAGACA
GCAATGGAAACAAAAGCTACCATTATCAGAAATTCCTTCGATTTGAACTCATGTATTACT
GAAGATGATGATTCATTCTTTGTCGAAAGCGATAATGTCAGTGTGAGGACTGTCGTCGAG
ATAGATTTGGAAGCTCCTCCTGTTCTGGAAACTGAGCTAGACAATTTGTCTAAAGAAAAT
GGCAAACAAAAAGAAGCATCGTTGCAGTTGCCTGAACACAAACCTGAGCAAACACAGGAT
GAAGTTGTCAGGGTCGCAGCGGAAGCTATAGTTGCCATTTCATCATCCAGTCAAATAGAC
ACCATCTGCAGTGATCCATCTGATAATCCTCTGGGATCCCTAGGTTGGTTTGTTGGCATA
GTCGTTTCTTTTGAGAGTGAACTTGAGAGCAAGTCTAAAGAAATAATAGTCGAGGATGCT
ATGATTGTTGCGCGACCTACTACTACCATGGAGATGGATTACTTTGAGGCAATGACATTG
CAGCTAGAAGAGACTAAGGAACAAGACTACCTGCCCAAGCCTTTTGTTCCTGAAGTCCAA
CCAGTGGAAGATGCAGGAGCCACTTCACTAACAAACCGAACCAGAAGAGGACAAGGAAGG
TGGGGAAGACAGCGGAGGGACTTTCAAAGGGATATCCTTCCCGGATTAGCTTCCTTGTCA
AGGCATGAAGTGACTGAAGACATTCAGACCTTCGGAGAGTTGATGAGAGCTACAGGTCAT
TCTTGGAACTCGGGATCGAAGAGAAGGAATGGAGGTACGAGGGGAAGGCGGAGGATGGTG
ATTGAGACCACCCCTGTCACTGTGTCAACCCCATTATGCCCTCCTCTAAAGCAGAATTTG
AGTAACATTGTATCCAGTTTGGAGGACAAAAGCCTAACAGGGTGGGGGGGGAAGACGACT
AGACGTCCGAGGAGGCAAAGATGCCCTGCAGATCATCCTCCTGCTGTCCCATTTACTAAA
ACTATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005151
PEP Infomation

pacid=37472126 transcript=PGSC0003DMT400007407 locus=PGSC0003DMG400002849 ID=PGSC0003DMT400007407.v4.03 annot-version=v4.03
Sequence

MVAQAHCKGYVPAYYSMSYLSEDLNNRWPLHYGEKIFTNAQYCNGFMPRTTIDSDPGYDK
DVLKQKILEHEETFKNQVFELHRLYRTQRDMMYDIKRTELHRPWTSMEPSSSSNILGSHL
LPKDAWKGHTNSFPFANSSYARPSMSGTEIVNSPFSSSKANDVQSGHGQMHNGCSSKICE
SLDARPSKLRKKMFDLQLPADEYLDTDEVEQLRYDEGSFYPSSRANGNDKVSQESCTRLF
PGAGTKSDKKDASASHSCFRSSVRLADLNKPAQPEEAISLPVDFLGYGNSHKETRRLNAS
ANSNPAFVALPRETTWNSHHTSLSKGKERDWFPSTYETGKVEGSLTPVPHSFSHNKFPTP
RQLAQVMLDKAFLRPGVQSPHYFKDDLWKERVGHGPETFHGNHEKSEYTYGRPFITSRTA
SPYPFANSSEFTDSWSHTLSSWGKPSGFAARLSSGHTNPSLNSCAMVGKSPKSPQCHDIF
GDKWHIDGSSRSNLGEATNFSIRNGFYHGSSSGPKESTRWFSVAFDSEKQNKSDNLTSDR
SFNNECEKFPITSNNMDLISEKGFDLNVLSKDSVNEELASRDLELVDEKREPQDCKPVLP
WLKAKPSFKNESTDTMNGMVEAYTNSPICGNGPLESFSDVCNAQNIAPAMIDLNMKATKE
LGETRSVRKILGAPIPEIPCASKNESSSFVSTSATLCSSPIEENSRHEERRIVIDINIAC
DLSMVEPEKQVVMEAVVAETAMETKATIIRNSFDLNSCITEDDDSFFVESDNVSVRTVVE
IDLEAPPVLETELDNLSKENGKQKEASLQLPEHKPEQTQDEVVRVAAEAIVAISSSSQID
TICSDPSDNPLGSLGWFVGIVVSFESELESKSKEIIVEDAMIVARPTTTMEMDYFEAMTL
QLEETKEQDYLPKPFVPEVQPVEDAGATSLTNRTRRGQGRWGRQRRDFQRDILPGLASLS
RHEVTEDIQTFGELMRATGHSWNSGSKRRNGGTRGRRRMVIETTPVTVSTPLCPPLKQNL
SNIVSSLEDKSLTGWGGKTTRRPRRQRCPADHPPAVPFTKTM*

Transcript Sequence

Transcript ID

PGSC0003DMT400007407
Transcript Infomation

pacid=37472126 locus=PGSC0003DMG400002849 ID=PGSC0003DMT400007407.v4.03 annot-version=v4.03
Sequence

ATGGTAGCACAAGCCCATTGTAAAGGCTACGTACCAGCTTATTACTCCATGAGCTACCTT
AGCGAGGATTTAAACAATAGATGGCCCCTACATTATGGAGAGAAAATCTTCACAAACGCT
CAATACTGTAATGGTTTCATGCCAAGGACTACGATAGATTCAGATCCTGGATATGATAAG
GATGTTCTAAAGCAGAAAATACTTGAACACGAGGAAACATTCAAGAATCAGGTATTTGAA
CTTCATCGCCTTTACAGAACTCAGAGGGACATGATGTATGACATTAAAAGGACGGAATTG
CATAGACCTTGGACATCAATGGAGCCATCATCTTCATCAAACATTCTTGGATCCCATCTA
CTACCTAAAGATGCTTGGAAAGGCCATACCAACAGCTTCCCCTTTGCAAATTCAAGTTAT
GCTAGACCATCTATGTCTGGTACTGAAATTGTAAATTCTCCATTCAGTTCTTCAAAAGCG
AATGATGTACAGTCTGGTCACGGTCAAATGCATAATGGTTGCTCTTCAAAGATCTGTGAA
TCTTTGGATGCCAGGCCCTCAAAATTACGGAAGAAGATGTTCGATCTTCAACTTCCAGCT
GATGAGTACTTAGATACTGATGAAGTTGAGCAGTTGCGATATGATGAAGGATCGTTCTAT
CCAAGTTCCCGTGCTAATGGAAATGATAAAGTTTCCCAAGAGAGTTGTACAAGATTATTC
CCTGGTGCTGGTACAAAGAGTGATAAAAAAGATGCTTCAGCATCCCATTCGTGTTTCAGA
AGCTCAGTCAGGTTGGCTGATCTCAATAAACCAGCTCAGCCTGAAGAAGCAATCTCATTG
CCTGTTGATTTTCTTGGATATGGTAATAGTCATAAGGAGACAAGAAGGCTAAATGCTTCC
GCTAATTCAAATCCAGCATTTGTGGCTTTGCCTAGAGAAACCACATGGAACTCCCATCAT
ACAAGCCTTAGTAAAGGCAAAGAGAGGGACTGGTTCCCTTCCACATATGAAACAGGTAAA
GTCGAAGGTAGCTTGACTCCAGTACCTCATAGTTTTTCACACAACAAGTTCCCTACACCA
CGCCAACTGGCACAAGTAATGCTTGATAAAGCCTTTCTACGTCCTGGGGTTCAATCACCT
CACTATTTCAAGGATGACCTATGGAAAGAGAGAGTGGGGCATGGTCCAGAGACCTTCCAC
GGAAATCATGAGAAGTCCGAATATACCTATGGGAGACCATTTATCACTTCTCGGACAGCT
AGTCCATATCCATTCGCTAATTCCTCAGAGTTTACCGATTCATGGTCGCACACACTCTCT
TCTTGGGGTAAACCAAGTGGCTTTGCTGCAAGGCTATCATCAGGACATACAAACCCGTCA
TTGAACTCATGTGCCATGGTTGGTAAGAGCCCGAAATCACCTCAATGCCATGATATTTTT
GGAGACAAGTGGCATATTGATGGCAGTTCTAGATCAAATTTAGGTGAGGCTACTAATTTC
TCCATCAGGAATGGGTTTTACCATGGGTCCTCATCTGGGCCCAAAGAATCAACCCGTTGG
TTCTCTGTTGCTTTTGACTCTGAGAAGCAAAACAAGAGTGACAATTTGACATCTGACCGC
TCCTTTAACAATGAATGTGAGAAATTTCCTATTACCTCCAATAATATGGACTTGATATCA
GAAAAAGGTTTCGATTTGAATGTACTATCAAAGGATTCAGTAAATGAGGAACTTGCCAGC
AGGGATCTTGAGTTGGTTGATGAAAAACGAGAGCCTCAAGACTGTAAACCAGTGTTGCCG
TGGCTTAAAGCTAAACCAAGTTTCAAAAATGAGAGTACAGATACCATGAATGGAATGGTT
GAAGCCTACACAAACTCACCTATCTGTGGAAATGGCCCATTGGAAAGTTTCAGCGACGTC
TGCAATGCGCAGAATATTGCACCAGCAATGATAGATCTTAACATGAAGGCCACAAAAGAG
TTGGGGGAAACCCGAAGTGTCAGGAAAATTCTGGGGGCTCCAATTCCTGAAATTCCATGT
GCTTCCAAAAATGAGTCGTCTTCATTTGTTTCCACATCTGCTACTCTTTGTTCCTCACCC
ATAGAAGAAAATAGCAGACACGAAGAGAGGAGAATAGTGATTGACATTAACATAGCTTGT
GACCTTTCTATGGTTGAGCCCGAGAAACAGGTTGTCATGGAAGCAGTTGTTGCTGAGACA
GCAATGGAAACAAAAGCTACCATTATCAGAAATTCCTTCGATTTGAACTCATGTATTACT
GAAGATGATGATTCATTCTTTGTCGAAAGCGATAATGTCAGTGTGAGGACTGTCGTCGAG
ATAGATTTGGAAGCTCCTCCTGTTCTGGAAACTGAGCTAGACAATTTGTCTAAAGAAAAT
GGCAAACAAAAAGAAGCATCGTTGCAGTTGCCTGAACACAAACCTGAGCAAACACAGGAT
GAAGTTGTCAGGGTCGCAGCGGAAGCTATAGTTGCCATTTCATCATCCAGTCAAATAGAC
ACCATCTGCAGTGATCCATCTGATAATCCTCTGGGATCCCTAGGTTGGTTTGTTGGCATA
GTCGTTTCTTTTGAGAGTGAACTTGAGAGCAAGTCTAAAGAAATAATAGTCGAGGATGCT
ATGATTGTTGCGCGACCTACTACTACCATGGAGATGGATTACTTTGAGGCAATGACATTG
CAGCTAGAAGAGACTAAGGAACAAGACTACCTGCCCAAGCCTTTTGTTCCTGAAGTCCAA
CCAGTGGAAGATGCAGGAGCCACTTCACTAACAAACCGAACCAGAAGAGGACAAGGAAGG
TGGGGAAGACAGCGGAGGGACTTTCAAAGGGATATCCTTCCCGGATTAGCTTCCTTGTCA
AGGCATGAAGTGACTGAAGACATTCAGACCTTCGGAGAGTTGATGAGAGCTACAGGTCAT
TCTTGGAACTCGGGATCGAAGAGAAGGAATGGAGGTACGAGGGGAAGGCGGAGGATGGTG
ATTGAGACCACCCCTGTCACTGTGTCAACCCCATTATGCCCTCCTCTAAAGCAGAATTTG
AGTAACATTGTATCCAGTTTGGAGGACAAAAGCCTAACAGGGTGGGGGGGGAAGACGACT
AGACGTCCGAGGAGGCAAAGATGCCCTGCAGATCATCCTCCTGCTGTCCCATTTACTAAA
ACTATGTGA