Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007401
CDS Infomation

pacid=37473772 polypeptide=PGSC0003DMP400005147 locus=PGSC0003DMG400002845 ID=PGSC0003DMT400007401.v4.03 annot-version=v4.03
Sequence

ATGATGATCCCTTTTGTCACCTTCACCTTACTCATCTTCTTCAACTTGATTTCATCATCT
TCTTCTTCACAAATCTCCATTTCTGTAACCCCAAAAACCTTATCAAAATCTGGTGATTTT
GTTACAATCAAATGGACTGGTATCCCCTCACCTTCTAAACTCGATTTCTTAGGAATTTAC
TCTCCACCCAGTTCACTCCACGACAATTTCATTGGCTATATTTTCCTATCTTCAACACCC
GAATGGGAATCTGGGTCGGGTTCAATTTCCATCCCTTTAGTCAATCTTCGATCTGGGTAT
CAGTTTCGGATATTCAGATGGACGGAATCGGAGATTGTACCGGATCTAGTGGATCATGAC
CACAATCCATTGCCGCAGACGAAGCATATTCTTGCGGTGTCGGAGGAGGTTGGGTTTGTT
TCGGGTCGGGGACCCGAACAGGTTCATTTGGCTTTAACGGGTTTTGAAGATGAGATGCGG
GTTATGTTTGTTACGCCTGACGGGAAAGAGAGTTATGTGAGATATGGGTTGACCCGGGGT
AGATTGGGTCGGGTTGTGAAAACTCGGGTTGTGAGGTATGAGAAGGAAGATTTATGTGAT
GCACCAGCTAATAGTAGTATTGGATGGAGAGATCCTGGGTATATACATGATGGTGTTATG
CTTAATTTGAAAAAGGGAAAGAAGTATTATTATCAGGTTGGCAGTGATTCAGGGGGCTGG
AGCACCATTTACAGCTTTGTGTCACAGAATAGAGACTCAGGTGAAACATTTGCTTTCTTG
TTTGGAGACATGGGGACTGCTACCCCATACTTGACATTTCTTCGTACACAGGACGAAAGT
AAATCAACGATTAAGTGGATTAGCCGTGATATTGAAGCTCTTGGTAATAAGCCTGCCCTT
ATCTCACATATTGGAGATATCAGCTACGCTAGAGGATACTCTTGGTTGTGGGACAACTTT
TTTACTCAGGTAGAACCTGTTGCATCCAGAGTTCCATACCATGTATGCATCGGAAACCAT
GAATATGATTGGCCACTTCAACCTTGGAAGCCTGATTGGTCAAGCTACGGGAAAGATGGG
GGAGGTGAATGTGGTGTACCCTACAGTCATAAGTTCCATATGCCAGGAAACTCTTCAGTG
CCGACTGGAATGCATGCTCCTGCAACTCGGAATCTTTATTACTCATTTGATTCTGGGCCC
GTTCACTTTGTCTATATGTCAACTGAAACCAATTTCCTTCCAGGTAGTAACCAGTATGAC
TTTTTAAAGCATGACTTGGAATCAGTTGATCGAGTAAAAACTCCTTTTGTTGTCTTTCAA
GGGCACAGACCAATGTACAGTTCAAGTAGCGGAGCAAAAGATATATCTTTGAGGAAGAGA
ATGATTGAGTATTTGGAACCTCTTCTTGTGAAGAACAATGTGAATCTTGTATTGTGGGGG
CATGTTCATAGGTATGAGAGGTTTTGCCCTTTGAATAACTTCACCTGTGGAAGCTTGGCC
TTGAATGGGAAGGAGCAAAAGGCTTTCCCAGTTCAAATTGTGATTGGGATGGCAGGACAG
GACTGGCAGCCTATCTGGGCACCAAGAGAAGACCACCCTACGGATCCTATTTTCCCACAG
CCTCTGCAATCTCTGTACCGTGGGAGTGAATTTGGCTACGTGAGGCTGCATGCCACAAAG
AAAAAGCTTACACTTTCTTATGTAGGAAACCATGACGGAGAGGTGCATGATAAGGTGGAG
TTCCTAGCTTCAGGACTACTTCTCAGTGCTGGTATCCGTGATGGTCCTGCAGATGCAGTA
CACATGGAGTCTAAGTTCTCATGGTATGTAAAGGTTGGAAGTGTGCTAATGCTTGGAGCT
TTTATGGGTTACATAGTTGGATTCTTATCTCATGCTCGGAAAAATTCTGCTGATAAAGGA
TGGAGACCTATAAAAACTGAGGAAATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400005147
PEP Infomation

pacid=37473772 transcript=PGSC0003DMT400007401 locus=PGSC0003DMG400002845 ID=PGSC0003DMT400007401.v4.03 annot-version=v4.03
Sequence

MMIPFVTFTLLIFFNLISSSSSSQISISVTPKTLSKSGDFVTIKWTGIPSPSKLDFLGIY
SPPSSLHDNFIGYIFLSSTPEWESGSGSISIPLVNLRSGYQFRIFRWTESEIVPDLVDHD
HNPLPQTKHILAVSEEVGFVSGRGPEQVHLALTGFEDEMRVMFVTPDGKESYVRYGLTRG
RLGRVVKTRVVRYEKEDLCDAPANSSIGWRDPGYIHDGVMLNLKKGKKYYYQVGSDSGGW
STIYSFVSQNRDSGETFAFLFGDMGTATPYLTFLRTQDESKSTIKWISRDIEALGNKPAL
ISHIGDISYARGYSWLWDNFFTQVEPVASRVPYHVCIGNHEYDWPLQPWKPDWSSYGKDG
GGECGVPYSHKFHMPGNSSVPTGMHAPATRNLYYSFDSGPVHFVYMSTETNFLPGSNQYD
FLKHDLESVDRVKTPFVVFQGHRPMYSSSSGAKDISLRKRMIEYLEPLLVKNNVNLVLWG
HVHRYERFCPLNNFTCGSLALNGKEQKAFPVQIVIGMAGQDWQPIWAPREDHPTDPIFPQ
PLQSLYRGSEFGYVRLHATKKKLTLSYVGNHDGEVHDKVEFLASGLLLSAGIRDGPADAV
HMESKFSWYVKVGSVLMLGAFMGYIVGFLSHARKNSADKGWRPIKTEEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400007401
Transcript Infomation

pacid=37473772 locus=PGSC0003DMG400002845 ID=PGSC0003DMT400007401.v4.03 annot-version=v4.03
Sequence

ATGATGATCCCTTTTGTCACCTTCACCTTACTCATCTTCTTCAACTTGATTTCATCATCT
TCTTCTTCACAAATCTCCATTTCTGTAACCCCAAAAACCTTATCAAAATCTGGTGATTTT
GTTACAATCAAATGGACTGGTATCCCCTCACCTTCTAAACTCGATTTCTTAGGAATTTAC
TCTCCACCCAGTTCACTCCACGACAATTTCATTGGCTATATTTTCCTATCTTCAACACCC
GAATGGGAATCTGGGTCGGGTTCAATTTCCATCCCTTTAGTCAATCTTCGATCTGGGTAT
CAGTTTCGGATATTCAGATGGACGGAATCGGAGATTGTACCGGATCTAGTGGATCATGAC
CACAATCCATTGCCGCAGACGAAGCATATTCTTGCGGTGTCGGAGGAGGTTGGGTTTGTT
TCGGGTCGGGGACCCGAACAGGTTCATTTGGCTTTAACGGGTTTTGAAGATGAGATGCGG
GTTATGTTTGTTACGCCTGACGGGAAAGAGAGTTATGTGAGATATGGGTTGACCCGGGGT
AGATTGGGTCGGGTTGTGAAAACTCGGGTTGTGAGGTATGAGAAGGAAGATTTATGTGAT
GCACCAGCTAATAGTAGTATTGGATGGAGAGATCCTGGGTATATACATGATGGTGTTATG
CTTAATTTGAAAAAGGGAAAGAAGTATTATTATCAGGTTGGCAGTGATTCAGGGGGCTGG
AGCACCATTTACAGCTTTGTGTCACAGAATAGAGACTCAGGTGAAACATTTGCTTTCTTG
TTTGGAGACATGGGGACTGCTACCCCATACTTGACATTTCTTCGTACACAGGACGAAAGT
AAATCAACGATTAAGTGGATTAGCCGTGATATTGAAGCTCTTGGTAATAAGCCTGCCCTT
ATCTCACATATTGGAGATATCAGCTACGCTAGAGGATACTCTTGGTTGTGGGACAACTTT
TTTACTCAGGTAGAACCTGTTGCATCCAGAGTTCCATACCATGTATGCATCGGAAACCAT
GAATATGATTGGCCACTTCAACCTTGGAAGCCTGATTGGTCAAGCTACGGGAAAGATGGG
GGAGGTGAATGTGGTGTACCCTACAGTCATAAGTTCCATATGCCAGGAAACTCTTCAGTG
CCGACTGGAATGCATGCTCCTGCAACTCGGAATCTTTATTACTCATTTGATTCTGGGCCC
GTTCACTTTGTCTATATGTCAACTGAAACCAATTTCCTTCCAGGTAGTAACCAGTATGAC
TTTTTAAAGCATGACTTGGAATCAGTTGATCGAGTAAAAACTCCTTTTGTTGTCTTTCAA
GGGCACAGACCAATGTACAGTTCAAGTAGCGGAGCAAAAGATATATCTTTGAGGAAGAGA
ATGATTGAGTATTTGGAACCTCTTCTTGTGAAGAACAATGTGAATCTTGTATTGTGGGGG
CATGTTCATAGGTATGAGAGGTTTTGCCCTTTGAATAACTTCACCTGTGGAAGCTTGGCC
TTGAATGGGAAGGAGCAAAAGGCTTTCCCAGTTCAAATTGTGATTGGGATGGCAGGACAG
GACTGGCAGCCTATCTGGGCACCAAGAGAAGACCACCCTACGGATCCTATTTTCCCACAG
CCTCTGCAATCTCTGTACCGTGGGAGTGAATTTGGCTACGTGAGGCTGCATGCCACAAAG
AAAAAGCTTACACTTTCTTATGTAGGAAACCATGACGGAGAGGTGCATGATAAGGTGGAG
TTCCTAGCTTCAGGACTACTTCTCAGTGCTGGTATCCGTGATGGTCCTGCAGATGCAGTA
CACATGGAGTCTAAGTTCTCATGGTATGTAAAGGTTGGAAGTGTGCTAATGCTTGGAGCT
TTTATGGGTTACATAGTTGGATTCTTATCTCATGCTCGGAAAAATTCTGCTGATAAAGGA
TGGAGACCTATAAAAACTGAGGAAATATGA