Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007387
CDS Infomation

pacid=37473789 polypeptide=PGSC0003DMP400005138 locus=PGSC0003DMG400002838 ID=PGSC0003DMT400007387.v4.03 annot-version=v4.03
Sequence

ATGGCGATTTCAACGTTTCCATCTGTGGATAAATGTGCTTCCATAGGTCGCGAAAAGGAT
ACAGTAATCGCAGACATGGATGGAACTTTACTTCGAGGACGAAGCTCTTTCCCTTATTTC
GCCTTAATTGCTTTCGAAGTCGGAGGTGTTTTAAGGTTACTTATACTTCTCTTATCTTCA
CCACTCGCTGGACTTCTTTACTATTTCGTCTCGGAGTCTGCTGGAATTCAAGTTCTTATT
TTCGTCACTTTTGCTGGGATGAAAGTATCTGATGTAGAATCGGTAGCACGTGCAGTGCTA
CCGAAATTCTACTCAGAAGATGTTCATCCTGAGTCATGGAAAGTGTTCTCTTCTTGTGGG
AAACGTTGTGTTTTAACCGCGAATCCTAGGGTTATGGTGGAACCATTTTTGAAGGATTTT
TTGGGAGCTGATTTGGTTTTAGGAACTGAGATTGAAAGTTATAAAGGTAGAGCTACTGGC
TTTGTTAAAAAGCCAGGAGTACTTGTTGGTAAAAACAAGGCTGATGCTCTTATAAAAGCT
TTTGGAGAGAGTAAACCTGAGATTGGTTTGGGTGATCGTCATACTGATTTTCCTTTCTTG
GCATTGTGTAAGGAAGGTTATATTGTACCACCAAAACCAGAAGTTAAAGCTGTAACAACA
AGCAAACTTCCCAAGCCCATCATTTTCCATGACGGCCGTTTAGTCCAAAAGCCAACACCT
CTCATGTCACTACTCATCCTACTGTGGATCCCGATTGGATTCATTCTGGCGTGTTTACGC
ATTGCTGCTGGTTCCCTCCTCCCTATGCCTATCGTCTACTACGCCTTTTGGGCGTTAGGT
GTTCGTGTCATCATCAAAGGTACCCCTCCACCTCCCGTCAATAAATCCAACAACAAATCA
GGTGTCCTCTTCATTTGCTCACACAGAACTCTCCTTGACCCGATTTTCCTCTCTACTGCC
CTTGGACGTCCGATTCCAGCTGTTACATACTCCGTTTCACGTCTCTCTGAGATCATTTCA
CCGATTAAAACAGTTAGACTTAATCGTGATCGAGATCTAGATGCATCGATGATAAAAAAA
CTCTTACAAGAAGGTGACCTAGCAATATGCCCCGAAGGGACAACATGTAGGGAACCGTTT
CTACTTAGATTCTCCGCATTATTTGCTGAGTTAACAGATGAACTTGTACCCGTTGCTATG
GTGAATAAGATGAGCATGTTTCACGGTACAACGGCTAGAGGATGGAAAGGGATGGATCCA
TTTTACTTCTTTATGAACCCAAGCCCCGCTTATGAGGTTACATTTTTGAATAAGTTGCCG
TATGAGCTAACTTGTAACGCGGGGAAATCGAGCCATGAAGTAGCTAACTATATACAAAGG
GTTATTGCTGCAACTCTTTCTTATGAATGCACTAGTTTTACAAGGAAGGATAAGTATCGT
GCACTTGCTGGAAATGATGGAATTGTTGTTGAGAAGCCTAAGATCAAAAAAAGTATAATG
GGATGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005138
PEP Infomation

pacid=37473789 transcript=PGSC0003DMT400007387 locus=PGSC0003DMG400002838 ID=PGSC0003DMT400007387.v4.03 annot-version=v4.03
Sequence

MAISTFPSVDKCASIGREKDTVIADMDGTLLRGRSSFPYFALIAFEVGGVLRLLILLLSS
PLAGLLYYFVSESAGIQVLIFVTFAGMKVSDVESVARAVLPKFYSEDVHPESWKVFSSCG
KRCVLTANPRVMVEPFLKDFLGADLVLGTEIESYKGRATGFVKKPGVLVGKNKADALIKA
FGESKPEIGLGDRHTDFPFLALCKEGYIVPPKPEVKAVTTSKLPKPIIFHDGRLVQKPTP
LMSLLILLWIPIGFILACLRIAAGSLLPMPIVYYAFWALGVRVIIKGTPPPPVNKSNNKS
GVLFICSHRTLLDPIFLSTALGRPIPAVTYSVSRLSEIISPIKTVRLNRDRDLDASMIKK
LLQEGDLAICPEGTTCREPFLLRFSALFAELTDELVPVAMVNKMSMFHGTTARGWKGMDP
FYFFMNPSPAYEVTFLNKLPYELTCNAGKSSHEVANYIQRVIAATLSYECTSFTRKDKYR
ALAGNDGIVVEKPKIKKSIMGC*

Transcript Sequence

Transcript ID

PGSC0003DMT400007387
Transcript Infomation

pacid=37473789 locus=PGSC0003DMG400002838 ID=PGSC0003DMT400007387.v4.03 annot-version=v4.03
Sequence

ATGGCGATTTCAACGTTTCCATCTGTGGATAAATGTGCTTCCATAGGTCGCGAAAAGGAT
ACAGTAATCGCAGACATGGATGGAACTTTACTTCGAGGACGAAGCTCTTTCCCTTATTTC
GCCTTAATTGCTTTCGAAGTCGGAGGTGTTTTAAGGTTACTTATACTTCTCTTATCTTCA
CCACTCGCTGGACTTCTTTACTATTTCGTCTCGGAGTCTGCTGGAATTCAAGTTCTTATT
TTCGTCACTTTTGCTGGGATGAAAGTATCTGATGTAGAATCGGTAGCACGTGCAGTGCTA
CCGAAATTCTACTCAGAAGATGTTCATCCTGAGTCATGGAAAGTGTTCTCTTCTTGTGGG
AAACGTTGTGTTTTAACCGCGAATCCTAGGGTTATGGTGGAACCATTTTTGAAGGATTTT
TTGGGAGCTGATTTGGTTTTAGGAACTGAGATTGAAAGTTATAAAGGTAGAGCTACTGGC
TTTGTTAAAAAGCCAGGAGTACTTGTTGGTAAAAACAAGGCTGATGCTCTTATAAAAGCT
TTTGGAGAGAGTAAACCTGAGATTGGTTTGGGTGATCGTCATACTGATTTTCCTTTCTTG
GCATTGTGTAAGGAAGGTTATATTGTACCACCAAAACCAGAAGTTAAAGCTGTAACAACA
AGCAAACTTCCCAAGCCCATCATTTTCCATGACGGCCGTTTAGTCCAAAAGCCAACACCT
CTCATGTCACTACTCATCCTACTGTGGATCCCGATTGGATTCATTCTGGCGTGTTTACGC
ATTGCTGCTGGTTCCCTCCTCCCTATGCCTATCGTCTACTACGCCTTTTGGGCGTTAGGT
GTTCGTGTCATCATCAAAGGTACCCCTCCACCTCCCGTCAATAAATCCAACAACAAATCA
GGTGTCCTCTTCATTTGCTCACACAGAACTCTCCTTGACCCGATTTTCCTCTCTACTGCC
CTTGGACGTCCGATTCCAGCTGTTACATACTCCGTTTCACGTCTCTCTGAGATCATTTCA
CCGATTAAAACAGTTAGACTTAATCGTGATCGAGATCTAGATGCATCGATGATAAAAAAA
CTCTTACAAGAAGGTGACCTAGCAATATGCCCCGAAGGGACAACATGTAGGGAACCGTTT
CTACTTAGATTCTCCGCATTATTTGCTGAGTTAACAGATGAACTTGTACCCGTTGCTATG
GTGAATAAGATGAGCATGTTTCACGGTACAACGGCTAGAGGATGGAAAGGGATGGATCCA
TTTTACTTCTTTATGAACCCAAGCCCCGCTTATGAGGTTACATTTTTGAATAAGTTGCCG
TATGAGCTAACTTGTAACGCGGGGAAATCGAGCCATGAAGTAGCTAACTATATACAAAGG
GTTATTGCTGCAACTCTTTCTTATGAATGCACTAGTTTTACAAGGAAGGATAAGTATCGT
GCACTTGCTGGAAATGATGGAATTGTTGTTGAGAAGCCTAAGATCAAAAAAAGTATAATG
GGATGCTAA