Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007372
CDS Infomation

pacid=37471840 polypeptide=PGSC0003DMP400005128 locus=PGSC0003DMG400002834 ID=PGSC0003DMT400007372.v4.03 annot-version=v4.03
Sequence

ATGGGATTGATCAAGATTCAATCTTTTTCATTTCTATTCACAATCTTGATTCTTTCATCA
TCTTCATTACCTCATCGCCATCGTCACAATCGTCGCCATCATCGTAGAAATTCACAGCTT
ATTCCGACTATATTTCATCCACCTTTGATACCATCAAATGTAAATGGTGAATGGGTACTT
TTACATGAATCAATTGGTGTTTCCGCAATGCATATGCAGCTTCTCTACAATAACAAAGTA
ATCATTTTCGATAGAACGGATTTCGGAGCTTCTAATCTCTCACTTCCACAAGGCAAATGT
CGTTTTGACGATGAAGTTCTTGATGTTGATTGCTCTGCTCATTCTGTTCTTTATGACATT
TTATCAAACACTTACCGTCCACTCATGGTTCAAACTGATGTTTGGTGTTCCTCCGGTGCA
CTCAACTCCGATGGTACATTAATTCAAACCGGTGGATACCATGCCGGCGATCGTAAAATC
AGGCTGTTTTCCCCCTGTGATGGTGATGTTGATTGTGATTGGACTGAATTGCCGCAGAAT
TTAACGGTTCAGAGATGGTATGCTTCTGATCATATACTTCCTGATGGACGTGTAATCATT
GTTGGTGGAAGAAAAGCTTTCAGCTATGAATTTTTCCCCAAAACTATGGACGATAATGGT
GGGGTTTTTCATCTTCCATTCTTAGTGGAAACTACAGACCCAATGGAAGAAAACAATCTT
TACCCATTCTTGTACATTTTACCCAACGGAAATCTCTACATTTTCTCAAATCAACGCTCA
ATTGTATTAGATTACGTTAATCACAATGTTCTCAGGGAATTCCCCATGATTCCCGGCGAG
AAACGGAGTTATCCGGCAACTGGGTCTTCGGTAATGCTTCCGTTACGGTTACGTCAGGGT
CAGGAACTGGTGGTGGAGGTGATGATCTGCGGCGGCGCGTGGGGTGGCGCGTATGTTAAA
GCACTGGAAGGGGAGTTTTGGCGGGGTTCAAGTTCATGTGGGCGAATGACACTAACGGAT
CCGGATCCGAAATGGGTCATGGAGGAAATGCCTTCGGGTCGGGTCATGCCGGATATGTTG
TTGTTACCTACCGGAGATGTGCTTATACTAAACGGGGCAGCGAATGGAGCAGCCGGGTGG
GAGAACGCAATTGACCCGGTTTTAAACCCGGTTCTTTACAGACCCGATGAACCCGACCCA
AGGAGAAGATTCACTGTGCTCACCCCTACTACAATTGCAAGAATGTACCACTCATCAGCT
ATTTTACTGCCAGATGGGAGGATATTAGTGGGTGGTAGTAATCCGCATGCAACGTACAAC
TTTACAGGCGTAAAGTACCCAACAGAGTTAAGCTTAGAGGCATTTTCACCACCTTATTTG
GCTACACAATACGCCCATCTAAGACCTTTAAACCAAGCCGTTGATGTGGGGCAAGTCTTA
TCGTACGGTCAACAGTTCTCGATCACGTTCACTCTACCCTTTCCGCAGCCCGATGCAGAG
TTCATGGTGAGCATGATTCCACCTTCATTTACTACACACTCATTTGGGATGAATCAAAGG
TTGTTGTTTTTGGAAATTGTGGGAGTAGAAAGGCTTTTTATGTTTGGTTATAGAGTCATA
GTGTTTGCACCTCCAACAAGGAATATTGCACCTCCAGGATATTATATGGTGTTTGTAGTT
CATCAAGGTGTTCCTGGTCACAGTGTTTGGGTGAAAATACAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005128
PEP Infomation

pacid=37471840 transcript=PGSC0003DMT400007372 locus=PGSC0003DMG400002834 ID=PGSC0003DMT400007372.v4.03 annot-version=v4.03
Sequence

MGLIKIQSFSFLFTILILSSSSLPHRHRHNRRHHRRNSQLIPTIFHPPLIPSNVNGEWVL
LHESIGVSAMHMQLLYNNKVIIFDRTDFGASNLSLPQGKCRFDDEVLDVDCSAHSVLYDI
LSNTYRPLMVQTDVWCSSGALNSDGTLIQTGGYHAGDRKIRLFSPCDGDVDCDWTELPQN
LTVQRWYASDHILPDGRVIIVGGRKAFSYEFFPKTMDDNGGVFHLPFLVETTDPMEENNL
YPFLYILPNGNLYIFSNQRSIVLDYVNHNVLREFPMIPGEKRSYPATGSSVMLPLRLRQG
QELVVEVMICGGAWGGAYVKALEGEFWRGSSSCGRMTLTDPDPKWVMEEMPSGRVMPDML
LLPTGDVLILNGAANGAAGWENAIDPVLNPVLYRPDEPDPRRRFTVLTPTTIARMYHSSA
ILLPDGRILVGGSNPHATYNFTGVKYPTELSLEAFSPPYLATQYAHLRPLNQAVDVGQVL
SYGQQFSITFTLPFPQPDAEFMVSMIPPSFTTHSFGMNQRLLFLEIVGVERLFMFGYRVI
VFAPPTRNIAPPGYYMVFVVHQGVPGHSVWVKIQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400007372
Transcript Infomation

pacid=37471840 locus=PGSC0003DMG400002834 ID=PGSC0003DMT400007372.v4.03 annot-version=v4.03
Sequence

ATGGGATTGATCAAGATTCAATCTTTTTCATTTCTATTCACAATCTTGATTCTTTCATCA
TCTTCATTACCTCATCGCCATCGTCACAATCGTCGCCATCATCGTAGAAATTCACAGCTT
ATTCCGACTATATTTCATCCACCTTTGATACCATCAAATGTAAATGGTGAATGGGTACTT
TTACATGAATCAATTGGTGTTTCCGCAATGCATATGCAGCTTCTCTACAATAACAAAGTA
ATCATTTTCGATAGAACGGATTTCGGAGCTTCTAATCTCTCACTTCCACAAGGCAAATGT
CGTTTTGACGATGAAGTTCTTGATGTTGATTGCTCTGCTCATTCTGTTCTTTATGACATT
TTATCAAACACTTACCGTCCACTCATGGTTCAAACTGATGTTTGGTGTTCCTCCGGTGCA
CTCAACTCCGATGGTACATTAATTCAAACCGGTGGATACCATGCCGGCGATCGTAAAATC
AGGCTGTTTTCCCCCTGTGATGGTGATGTTGATTGTGATTGGACTGAATTGCCGCAGAAT
TTAACGGTTCAGAGATGGTATGCTTCTGATCATATACTTCCTGATGGACGTGTAATCATT
GTTGGTGGAAGAAAAGCTTTCAGCTATGAATTTTTCCCCAAAACTATGGACGATAATGGT
GGGGTTTTTCATCTTCCATTCTTAGTGGAAACTACAGACCCAATGGAAGAAAACAATCTT
TACCCATTCTTGTACATTTTACCCAACGGAAATCTCTACATTTTCTCAAATCAACGCTCA
ATTGTATTAGATTACGTTAATCACAATGTTCTCAGGGAATTCCCCATGATTCCCGGCGAG
AAACGGAGTTATCCGGCAACTGGGTCTTCGGTAATGCTTCCGTTACGGTTACGTCAGGGT
CAGGAACTGGTGGTGGAGGTGATGATCTGCGGCGGCGCGTGGGGTGGCGCGTATGTTAAA
GCACTGGAAGGGGAGTTTTGGCGGGGTTCAAGTTCATGTGGGCGAATGACACTAACGGAT
CCGGATCCGAAATGGGTCATGGAGGAAATGCCTTCGGGTCGGGTCATGCCGGATATGTTG
TTGTTACCTACCGGAGATGTGCTTATACTAAACGGGGCAGCGAATGGAGCAGCCGGGTGG
GAGAACGCAATTGACCCGGTTTTAAACCCGGTTCTTTACAGACCCGATGAACCCGACCCA
AGGAGAAGATTCACTGTGCTCACCCCTACTACAATTGCAAGAATGTACCACTCATCAGCT
ATTTTACTGCCAGATGGGAGGATATTAGTGGGTGGTAGTAATCCGCATGCAACGTACAAC
TTTACAGGCGTAAAGTACCCAACAGAGTTAAGCTTAGAGGCATTTTCACCACCTTATTTG
GCTACACAATACGCCCATCTAAGACCTTTAAACCAAGCCGTTGATGTGGGGCAAGTCTTA
TCGTACGGTCAACAGTTCTCGATCACGTTCACTCTACCCTTTCCGCAGCCCGATGCAGAG
TTCATGGTGAGCATGATTCCACCTTCATTTACTACACACTCATTTGGGATGAATCAAAGG
TTGTTGTTTTTGGAAATTGTGGGAGTAGAAAGGCTTTTTATGTTTGGTTATAGAGTCATA
GTGTTTGCACCTCCAACAAGGAATATTGCACCTCCAGGATATTATATGGTGTTTGTAGTT
CATCAAGGTGTTCCTGGTCACAGTGTTTGGGTGAAAATACAGTGA