Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007321
CDS Infomation

pacid=37475232 polypeptide=PGSC0003DMP400005100 locus=PGSC0003DMG400002818 ID=PGSC0003DMT400007321.v4.03 annot-version=v4.03
Sequence

ATGTATCGCCCTGTGCCTATTACTACCCGAGGTGGGGAACCTACAGATAGTGGAGATCCT
GTGGTGACGTTGGACCAAGTTCCACGTTGGAGTAATGCTGAATTTAGGTATGCATATGAG
AATGCAGATCCTACTAATTCATGCTTTCCGGATCCTTTGGCATCTGCTTCTGGGTCTGAA
TGCAATGCTAGTGGCATGGTTTCCAAGTTTCCCATGGATCATGAGATTAACTCCAAGATA
TACTTGTGGAGAGGCGATCCCTGGAATCTCGAGGTAGATGCTGTTGTTAACTCTACTAAT
GAGAACTTAGACGAAGCTCACAGCAGCCCAGGATTGCATGCTTCAGCTGGACCTGGTCTT
GCAGAAGAGTGTACCACATTGGGAGGCTGCCGAACAGGAATGGCAAAAGTTACAAATGCT
TATGATCTTCCTGCTAGGAAGGTCATACATACTGTTGGTCCCAAGTATGCTGTAAAATAC
CATACTGCTGCAGAGAATGCGCTAAGCCATTGCTATCGCTCTTGCTTTGAGCTTCTTATA
GAAGATGGGCTCAAGAGCATTGCTATGGGCTGTATATATACAGAAGCGAAAAGTTACCCA
CGAGAACCAGCTGCTCATGTGGCAATAAGAACTGTAAGGCGGTTCAGTGAGAAACAGAAA
GATAAAGTGGAGGCAATTGTTTTCTGTACTACTACATCACAAGATACAGAGATTTACAAA
AGATTGCTTCCACTCTATTTTCCTCGGGATAAGCATGAGGAGGAAGTTGCCCTTCTAAAA
CTACCTGCAGATGTTGGGGATGAAAATGGGGAGACAACTATAGATGAGCGTAAAATTAGG
ATAAAACCATTACCAAATGCCAAAAAGTCCAATCCAAGGATTTCCCAGGCCTCTGTTGAT
TTGTCTGTCAGTAATGTTGGTTTGACCAGGAGCTCATCCTATTTGGATGCTTTTCTGGAT
CCTGCTTTTATGTCCCTGATCAAGGACCCAGATCAGCGACGGAGAGAACAATGGGAAAAA
ACTGCCCAAGCTCAAACTAGCTGGAACTTCTTTAAAATGTTTGGATATGGTGACGTCGCA
GGACCTCCTTTGTCAGCTGCAGAAGAATATTCTCTTCATTCTAGATATCTTACAAAAGCA
AATACTCTGAATTTTTCAGAAATTGCAGAAATGAAAATTGTCTACCGAGGAGGGGTTGAC
AGTGAAGGCCGTCCAGTAATGGTTATTGTGGGGGCACATTTCCTGCTAAGATGTCTTGAT
CTGGAGAGATTTATTATCCATGTTGTAAAGGAATTTGAACCATTGATACAGAAACCTTAC
TCTATTGTGTACTTCCATTCTGCTGCAACTCTACAGATGCAACCAGATCTAGGATTAATG
AAGAGGATACAACAAATTCTTGGTCGCAAGCACCAGCACAACCTTCATGCGATATATGTT
CTTCACCCTACTTTTGGACTGAAGAGTGCAGTTTTTGGTTTACAACTCTGTGTGGATAAT
GTGGTACTTGCGGTCCTATTATCCTCCTCTCTGTCTTCTCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005100
PEP Infomation

pacid=37475232 transcript=PGSC0003DMT400007321 locus=PGSC0003DMG400002818 ID=PGSC0003DMT400007321.v4.03 annot-version=v4.03
Sequence

MYRPVPITTRGGEPTDSGDPVVTLDQVPRWSNAEFRYAYENADPTNSCFPDPLASASGSE
CNASGMVSKFPMDHEINSKIYLWRGDPWNLEVDAVVNSTNENLDEAHSSPGLHASAGPGL
AEECTTLGGCRTGMAKVTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCFELLI
EDGLKSIAMGCIYTEAKSYPREPAAHVAIRTVRRFSEKQKDKVEAIVFCTTTSQDTEIYK
RLLPLYFPRDKHEEEVALLKLPADVGDENGETTIDERKIRIKPLPNAKKSNPRISQASVD
LSVSNVGLTRSSSYLDAFLDPAFMSLIKDPDQRRREQWEKTAQAQTSWNFFKMFGYGDVA
GPPLSAAEEYSLHSRYLTKANTLNFSEIAEMKIVYRGGVDSEGRPVMVIVGAHFLLRCLD
LERFIIHVVKEFEPLIQKPYSIVYFHSAATLQMQPDLGLMKRIQQILGRKHQHNLHAIYV
LHPTFGLKSAVFGLQLCVDNVVLAVLLSSSLSSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400007321
Transcript Infomation

pacid=37475232 locus=PGSC0003DMG400002818 ID=PGSC0003DMT400007321.v4.03 annot-version=v4.03
Sequence

ATGTATCGCCCTGTGCCTATTACTACCCGAGGTGGGGAACCTACAGATAGTGGAGATCCT
GTGGTGACGTTGGACCAAGTTCCACGTTGGAGTAATGCTGAATTTAGGTATGCATATGAG
AATGCAGATCCTACTAATTCATGCTTTCCGGATCCTTTGGCATCTGCTTCTGGGTCTGAA
TGCAATGCTAGTGGCATGGTTTCCAAGTTTCCCATGGATCATGAGATTAACTCCAAGATA
TACTTGTGGAGAGGCGATCCCTGGAATCTCGAGGTAGATGCTGTTGTTAACTCTACTAAT
GAGAACTTAGACGAAGCTCACAGCAGCCCAGGATTGCATGCTTCAGCTGGACCTGGTCTT
GCAGAAGAGTGTACCACATTGGGAGGCTGCCGAACAGGAATGGCAAAAGTTACAAATGCT
TATGATCTTCCTGCTAGGAAGGTCATACATACTGTTGGTCCCAAGTATGCTGTAAAATAC
CATACTGCTGCAGAGAATGCGCTAAGCCATTGCTATCGCTCTTGCTTTGAGCTTCTTATA
GAAGATGGGCTCAAGAGCATTGCTATGGGCTGTATATATACAGAAGCGAAAAGTTACCCA
CGAGAACCAGCTGCTCATGTGGCAATAAGAACTGTAAGGCGGTTCAGTGAGAAACAGAAA
GATAAAGTGGAGGCAATTGTTTTCTGTACTACTACATCACAAGATACAGAGATTTACAAA
AGATTGCTTCCACTCTATTTTCCTCGGGATAAGCATGAGGAGGAAGTTGCCCTTCTAAAA
CTACCTGCAGATGTTGGGGATGAAAATGGGGAGACAACTATAGATGAGCGTAAAATTAGG
ATAAAACCATTACCAAATGCCAAAAAGTCCAATCCAAGGATTTCCCAGGCCTCTGTTGAT
TTGTCTGTCAGTAATGTTGGTTTGACCAGGAGCTCATCCTATTTGGATGCTTTTCTGGAT
CCTGCTTTTATGTCCCTGATCAAGGACCCAGATCAGCGACGGAGAGAACAATGGGAAAAA
ACTGCCCAAGCTCAAACTAGCTGGAACTTCTTTAAAATGTTTGGATATGGTGACGTCGCA
GGACCTCCTTTGTCAGCTGCAGAAGAATATTCTCTTCATTCTAGATATCTTACAAAAGCA
AATACTCTGAATTTTTCAGAAATTGCAGAAATGAAAATTGTCTACCGAGGAGGGGTTGAC
AGTGAAGGCCGTCCAGTAATGGTTATTGTGGGGGCACATTTCCTGCTAAGATGTCTTGAT
CTGGAGAGATTTATTATCCATGTTGTAAAGGAATTTGAACCATTGATACAGAAACCTTAC
TCTATTGTGTACTTCCATTCTGCTGCAACTCTACAGATGCAACCAGATCTAGGATTAATG
AAGAGGATACAACAAATTCTTGGTCGCAAGCACCAGCACAACCTTCATGCGATATATGTT
CTTCACCCTACTTTTGGACTGAAGAGTGCAGTTTTTGGTTTACAACTCTGTGTGGATAAT
GTGGTACTTGCGGTCCTATTATCCTCCTCTCTGTCTTCTCTCTAA