Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007316
CDS Infomation

pacid=37473997 polypeptide=PGSC0003DMP400005096 locus=PGSC0003DMG400002817 ID=PGSC0003DMT400007316.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGATCAAGATTTGAAGTACTTTTGTAAGTTGTGTGACAAGAAGTATCCATGT
GGGAAGTCATTTGGTGGTCACATGAGGTCTCATGTACTAACAAAGGAAAAAGTTGAGTTT
AAACAGAAAAAGTTGCAATCTTGGATTGATGGTGGAAAGAACAGTAGCAAGAAAGATCCT
AAATCACAGTTTGAATTAAGTGAACATTCTGGTTATGGTCTTAGAGATAATCCCAAGAAA
ACTTGGAGGGCTTCGGATTCGAGGTCTCCTTTGTTGCCTCAGGAGAATGTTTGTCAGCAA
TGTGGTAAGGTGTTTCAATCGTTGAAAGCTTTGTGTGGTCATATGGCGTGTCACTCTGGC
AAAGACAGGGGAGGGTCGAAAGATGATCACTCATGGACCAGTGAAAACAAGAATCTGTTG
ATGGACAGCAACTCAGATACTGAAGCCGAGGAGCCAAAGCTGAAGAGCAGATCAAATACT
AAAAGGTACAATAGACTTGTAGCTAAGTCTTCCTCTTTTTGCTTAGTTAACAATAGAAGT
GTTTCGTCATCTGTTTCTGAGATTGATGAGCAAGATCAAGAGGAAGTAGCTAAGTGTTTG
ATGATGTTGTCAATGGATTCTGGGATTTGGAATGGTGTCAATTCAGTTGTTGAGTCCTCC
GACAACAATTCTGTTATTTTGGAGACGAAATCATCATCTGTCGACATGAAAGTAGCTAGA
AAGGATTGTCTAAAGCCTGCTGACAATCTAGATGAAACACATCGAAGGAGCAAAAAAGAG
GCGGACAGAAACTTGAAACTTAATGATTTGAATGCTGAAGCTGAGTCTGAGAATTCTGAT
TCCGGATACTTTTTAGGCGAATATATGAAAGTTGAATCAGATGCATCTGTTGATGAGTTC
CATAGAAATGGTAATTACCAATGGAATACATCTAACAAGAGCCTCGGAGTTTGGTGCGAT
GAGACTAGAAAAGACGTGGAAAAAGACTTAAACAGAACAACAACAACAACAAAGTACATA
ACAGAAATGAGGATTAATGGTTCAACCAAAGAATATAAATATGATAGCTATGGAATGGCT
TCAAATTTGGCTAAGAGTGAATCAAGAAAGAGAACAAAGGATATATCTTATGAACCAGAA
TTAGGAAATGAGTCGTCGTTCAGGAAGATAAAGGTTGGTTTTAAAGGTCCTGAAGGAAGC
AAACATACTCAGAAGAAGAAAAAGTATGAGTGCTTCAACTGCAAGAAGGCTTTTAGCTCT
TATCAGGCTCTTGGTGGACACAGACCTTGCAACAAAAAAGCCAATGCCTATTTCGAATCA
ACATATGAAACCGATGAGAATGGTCGTGGTGCTGAAAATGGTCCTAGTTACATAGACAAG
GGAAAGCATAGGGAGACATTTAACAACAGAAAACCAGCTGTTCATGATGGTCAAGATGTC
AATTACAATCCTGAGAAGAAGATGAAACCTAAAAAGTTCAAAGGACACGAATGCCCGTTC
TGCAACAGGATGTTTAAGTCTGGACAAGCTTTAGGTGGCCACAAAAGGTCACATTTTCTT
GTTGGTTCACAGGAAAATCATAATCAAGCTTCAGCAGTCAAAGGATCAGAATTTGCTGAT
TTACTTGATCTTAACCTTCCTGCTCCTGTTGAGGACATGAACGGTGAGCCTACCTTTGCG
CGTTGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400005096
PEP Infomation

pacid=37473997 transcript=PGSC0003DMT400007316 locus=PGSC0003DMG400002817 ID=PGSC0003DMT400007316.v4.03 annot-version=v4.03
Sequence

MEEDQDLKYFCKLCDKKYPCGKSFGGHMRSHVLTKEKVEFKQKKLQSWIDGGKNSSKKDP
KSQFELSEHSGYGLRDNPKKTWRASDSRSPLLPQENVCQQCGKVFQSLKALCGHMACHSG
KDRGGSKDDHSWTSENKNLLMDSNSDTEAEEPKLKSRSNTKRYNRLVAKSSSFCLVNNRS
VSSSVSEIDEQDQEEVAKCLMMLSMDSGIWNGVNSVVESSDNNSVILETKSSSVDMKVAR
KDCLKPADNLDETHRRSKKEADRNLKLNDLNAEAESENSDSGYFLGEYMKVESDASVDEF
HRNGNYQWNTSNKSLGVWCDETRKDVEKDLNRTTTTTKYITEMRINGSTKEYKYDSYGMA
SNLAKSESRKRTKDISYEPELGNESSFRKIKVGFKGPEGSKHTQKKKKYECFNCKKAFSS
YQALGGHRPCNKKANAYFESTYETDENGRGAENGPSYIDKGKHRETFNNRKPAVHDGQDV
NYNPEKKMKPKKFKGHECPFCNRMFKSGQALGGHKRSHFLVGSQENHNQASAVKGSEFAD
LLDLNLPAPVEDMNGEPTFARW*

Transcript Sequence

Transcript ID

PGSC0003DMT400007316
Transcript Infomation

pacid=37473997 locus=PGSC0003DMG400002817 ID=PGSC0003DMT400007316.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGATCAAGATTTGAAGTACTTTTGTAAGTTGTGTGACAAGAAGTATCCATGT
GGGAAGTCATTTGGTGGTCACATGAGGTCTCATGTACTAACAAAGGAAAAAGTTGAGTTT
AAACAGAAAAAGTTGCAATCTTGGATTGATGGTGGAAAGAACAGTAGCAAGAAAGATCCT
AAATCACAGTTTGAATTAAGTGAACATTCTGGTTATGGTCTTAGAGATAATCCCAAGAAA
ACTTGGAGGGCTTCGGATTCGAGGTCTCCTTTGTTGCCTCAGGAGAATGTTTGTCAGCAA
TGTGGTAAGGTGTTTCAATCGTTGAAAGCTTTGTGTGGTCATATGGCGTGTCACTCTGGC
AAAGACAGGGGAGGGTCGAAAGATGATCACTCATGGACCAGTGAAAACAAGAATCTGTTG
ATGGACAGCAACTCAGATACTGAAGCCGAGGAGCCAAAGCTGAAGAGCAGATCAAATACT
AAAAGGTACAATAGACTTGTAGCTAAGTCTTCCTCTTTTTGCTTAGTTAACAATAGAAGT
GTTTCGTCATCTGTTTCTGAGATTGATGAGCAAGATCAAGAGGAAGTAGCTAAGTGTTTG
ATGATGTTGTCAATGGATTCTGGGATTTGGAATGGTGTCAATTCAGTTGTTGAGTCCTCC
GACAACAATTCTGTTATTTTGGAGACGAAATCATCATCTGTCGACATGAAAGTAGCTAGA
AAGGATTGTCTAAAGCCTGCTGACAATCTAGATGAAACACATCGAAGGAGCAAAAAAGAG
GCGGACAGAAACTTGAAACTTAATGATTTGAATGCTGAAGCTGAGTCTGAGAATTCTGAT
TCCGGATACTTTTTAGGCGAATATATGAAAGTTGAATCAGATGCATCTGTTGATGAGTTC
CATAGAAATGGTAATTACCAATGGAATACATCTAACAAGAGCCTCGGAGTTTGGTGCGAT
GAGACTAGAAAAGACGTGGAAAAAGACTTAAACAGAACAACAACAACAACAAAGTACATA
ACAGAAATGAGGATTAATGGTTCAACCAAAGAATATAAATATGATAGCTATGGAATGGCT
TCAAATTTGGCTAAGAGTGAATCAAGAAAGAGAACAAAGGATATATCTTATGAACCAGAA
TTAGGAAATGAGTCGTCGTTCAGGAAGATAAAGGTTGGTTTTAAAGGTCCTGAAGGAAGC
AAACATACTCAGAAGAAGAAAAAGTATGAGTGCTTCAACTGCAAGAAGGCTTTTAGCTCT
TATCAGGCTCTTGGTGGACACAGACCTTGCAACAAAAAAGCCAATGCCTATTTCGAATCA
ACATATGAAACCGATGAGAATGGTCGTGGTGCTGAAAATGGTCCTAGTTACATAGACAAG
GGAAAGCATAGGGAGACATTTAACAACAGAAAACCAGCTGTTCATGATGGTCAAGATGTC
AATTACAATCCTGAGAAGAAGATGAAACCTAAAAAGTTCAAAGGACACGAATGCCCGTTC
TGCAACAGGATGTTTAAGTCTGGACAAGCTTTAGGTGGCCACAAAAGGTCACATTTTCTT
GTTGGTTCACAGGAAAATCATAATCAAGCTTCAGCAGTCAAAGGATCAGAATTTGCTGAT
TTACTTGATCTTAACCTTCCTGCTCCTGTTGAGGACATGAACGGTGAGCCTACCTTTGCG
CGTTGGTAG