Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007292
CDS Infomation

pacid=37439176 polypeptide=PGSC0003DMP400005078 locus=PGSC0003DMG400002807 ID=PGSC0003DMT400007292.v4.03 annot-version=v4.03
Sequence

ATGGAGGTTGAAAAGAGAACTTCAAAGGGAGGCTTTCTTCAGCTATTTGATTGGAATATC
AAATCTCGGAAGAAGCTTTTCTCTAACAAGTCTGAACTACCTGAAAACTCTAAACAAGGA
AAAGAAAATGCCAATGGATCAGCCAATTTAAGACTTCAGCAGGCTCATGATCATAGTCTT
GGTTCCAACTCCAAGCAGAACTATGATTTCTATAGCGCTTCATCAGTAGCTGAGGATGAA
AGTTATGGTCAAAAAGCACCTGGGGTTGTTGCACGTCTTATGGGATTGGATTCTTTGCCA
ACTTCAAAAGAGTCTGATCCCTATTTTAACTCATCCTCTGATTGTCACTCCTTCAGAGAT
TCTCCATACCTAAGTTTTATAGCTGATTTCCAGAATGAACATCATATGATAGTCGATGGT
AACATGCGAAATAAATTGGATGGATTTAAGAGAAACCCTGTTGAAGTAGGGCTGCAGAAG
GTGCAGAGCCGGCCCATCGAGAGGTTTCAAAGTGAGGTATTGCCTCCAAAATCAGCTAAA
CCTATTGCAGTTACTCAACCCAGATTGTTATCTCCTATCAAGAGTCCTGGGTTCATCCCT
CCTAAGAATGCAGCTTACATAATAGAGGCAGCTGCTAAAATATACCAGCAGAGTCCTCGA
CCCGCTGCCAGAGAAAAGGTGCAATCTTCTGGGTCTTCCTCTGCCCCTTTGAGAATACGG
GACTTGAGAGATCAAATAGAGGCTGTTCAGAGACAGTCTAGTATTTATGAAGCACTGCAC
AGGCCAAAAGAACAAAATTCTGTAAAAAACGTCAGAAGACAACCCTGTGAAAGAGTCCAG
GTTCAATCAGATAATATGCGTCAATTGAGGGTTTCTGAGGTATCAAGAAGAGATATATCC
CAAAATAAGGGGAAGGAGAAGTCAGTTTCACTAGCAGTTCAGGCAAAGACCAATATTCAG
AAAAGAGAGGGGAAGGAATCTACCTCTAGTAAGAACCCATCAAACCAGAAAGAACAGAAT
GAGTCTAAGTCTGGTCGGAGGCGGCCAAGTGTAAAAGGGGGGGAAAGGAAAAATTCACTC
AACCGGCCTTCTGATGTGCTCAGGCAGAACAACCAGAAGCAGAACTCTGCATCTAATAAA
GACGGGGAGAGTTCGAAAACTTCAGCTCCCTACCAAAAAGAGAAAAAATTATCATCTACT
GGTAACATGTCTAGGTCAACCAAGACTGTAAGTAGAATTGTTGTAAATACCACAACTGCT
ACCGGAATTGCAAGTATTGTAGAAACTGACGTTGGAAAGGACCTTTCATCATCTAGGGAC
TCCAGAGTGAGTTCCTTTACTGGAAAGAAACAGTCAGTCAATGTCGATATTGGTTCTGAT
GGATGTGGTGCTGACAATATGATGAAGAGTAAAGATGAGAGGTCTATAAAATGTAACTTA
GCTATTGAAGGATGCTCCAATTGGGAAACAGCTGACAGGAAAAATGGGAGTGATGTAGTG
TCATTTACTTTCACCTCACCCATCAAAAAATCAATGACTGGCCCCACATCATCAAGTCAT
GTTTTGGAAAAGAACAATGCTTTGTGTCTCTTTCCAGGTTCTTATGATGATCAGTCTGAT
TCAAGGACATCAACAATGCCTTCTTTTCCCATTGGTGGTGATGATTTAGGTATTCTCTTA
GAACAAAAGATTAAAGAATTAACTTCTAAAGTCAGACCATCTTGTGAAGATTTCATCAAA
ACGGGGACTGCTTCTATTTCTGCCAGTACTTTTGAAGATAGTGTGTCCATTGTAGCACAT
GGGAGGAGACCTCAAGTTGATTTGCTTAATGAAAAAGCAGGTGACCATGGTCACTCTTCT
GTTGATGACCTCCGGCTTACTGCAACTCAGATGTGGCAGGGTCCAAATAGGGTAGAAAAT
CCTAAAACTGCCAGCAGATTTACGTGTGAAGGAGAATTTAGTCTCCCTTGCACTAGTCTG
GCCTCAAGTATGGAACCTTCTATCTCAGGAGGCAGTTGCAACTCTTTGGATAGCTACAGA
AGTTTAGCCACTGATGGGAGCAAGTATCATCTGTCTGATGGATCTCACGAAATGATGAAT
TGGAAAACCTACATGAGGACCCATTTTGTGGAAGGTGATGCAGAGTTGTTGGACTCAGCC
TCTTCCGTTTCTCTTGCTGATGCAGGTGAAAAGGATTCAACTGCTACATCGACTTCCACA
AATTTCAATGAATCACCTTACTGGGAGTTTAATTATATCAGAGATATAATTAGAAGCTCA
GACTTGGTAATGGAAGAATTCTTGTTGGGTGAGGTTCCGAGCATTATTGCTCTTGATCTC
TTTGACAAGTTGGAGAATCAGAAGGCTGGAACCAACAAAAATGCAGAGGAGCAGCTGAAG
ATTCGGAGAAGAGTTTTGTTCTATTCGGTAGTCGAATGCCTGGAACTCAGATGCAAACTG
AGTTTTGGCAGAGGTGTTGAAGCTTGGGCAAAGTGGACAACATTGGTCCAAAGAAATGAG
TGGTTAGCAGAAGAAGTGTATAGAGAGATTGCTAGCTGGACAAGCATGGAAGAGTTGATG
GTGGATGAGATTGTTGACAAGGACATGAGCACTCAATACGGGAAGTGGACCGATTTTAGC
TTTGAAGCCTACGAAGAGGGTGTTGACATTGAGAAGGAGATCCTTTCATCTTTGATGGAT
GAATTGATCGGTGCCCTAATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005078
PEP Infomation

pacid=37439176 transcript=PGSC0003DMT400007292 locus=PGSC0003DMG400002807 ID=PGSC0003DMT400007292.v4.03 annot-version=v4.03
Sequence

MEVEKRTSKGGFLQLFDWNIKSRKKLFSNKSELPENSKQGKENANGSANLRLQQAHDHSL
GSNSKQNYDFYSASSVAEDESYGQKAPGVVARLMGLDSLPTSKESDPYFNSSSDCHSFRD
SPYLSFIADFQNEHHMIVDGNMRNKLDGFKRNPVEVGLQKVQSRPIERFQSEVLPPKSAK
PIAVTQPRLLSPIKSPGFIPPKNAAYIIEAAAKIYQQSPRPAAREKVQSSGSSSAPLRIR
DLRDQIEAVQRQSSIYEALHRPKEQNSVKNVRRQPCERVQVQSDNMRQLRVSEVSRRDIS
QNKGKEKSVSLAVQAKTNIQKREGKESTSSKNPSNQKEQNESKSGRRRPSVKGGERKNSL
NRPSDVLRQNNQKQNSASNKDGESSKTSAPYQKEKKLSSTGNMSRSTKTVSRIVVNTTTA
TGIASIVETDVGKDLSSSRDSRVSSFTGKKQSVNVDIGSDGCGADNMMKSKDERSIKCNL
AIEGCSNWETADRKNGSDVVSFTFTSPIKKSMTGPTSSSHVLEKNNALCLFPGSYDDQSD
SRTSTMPSFPIGGDDLGILLEQKIKELTSKVRPSCEDFIKTGTASISASTFEDSVSIVAH
GRRPQVDLLNEKAGDHGHSSVDDLRLTATQMWQGPNRVENPKTASRFTCEGEFSLPCTSL
ASSMEPSISGGSCNSLDSYRSLATDGSKYHLSDGSHEMMNWKTYMRTHFVEGDAELLDSA
SSVSLADAGEKDSTATSTSTNFNESPYWEFNYIRDIIRSSDLVMEEFLLGEVPSIIALDL
FDKLENQKAGTNKNAEEQLKIRRRVLFYSVVECLELRCKLSFGRGVEAWAKWTTLVQRNE
WLAEEVYREIASWTSMEELMVDEIVDKDMSTQYGKWTDFSFEAYEEGVDIEKEILSSLMD
ELIGALM*

Transcript Sequence

Transcript ID

PGSC0003DMT400007292
Transcript Infomation

pacid=37439176 locus=PGSC0003DMG400002807 ID=PGSC0003DMT400007292.v4.03 annot-version=v4.03
Sequence

ATGGAGGTTGAAAAGAGAACTTCAAAGGGAGGCTTTCTTCAGCTATTTGATTGGAATATC
AAATCTCGGAAGAAGCTTTTCTCTAACAAGTCTGAACTACCTGAAAACTCTAAACAAGGA
AAAGAAAATGCCAATGGATCAGCCAATTTAAGACTTCAGCAGGCTCATGATCATAGTCTT
GGTTCCAACTCCAAGCAGAACTATGATTTCTATAGCGCTTCATCAGTAGCTGAGGATGAA
AGTTATGGTCAAAAAGCACCTGGGGTTGTTGCACGTCTTATGGGATTGGATTCTTTGCCA
ACTTCAAAAGAGTCTGATCCCTATTTTAACTCATCCTCTGATTGTCACTCCTTCAGAGAT
TCTCCATACCTAAGTTTTATAGCTGATTTCCAGAATGAACATCATATGATAGTCGATGGT
AACATGCGAAATAAATTGGATGGATTTAAGAGAAACCCTGTTGAAGTAGGGCTGCAGAAG
GTGCAGAGCCGGCCCATCGAGAGGTTTCAAAGTGAGGTATTGCCTCCAAAATCAGCTAAA
CCTATTGCAGTTACTCAACCCAGATTGTTATCTCCTATCAAGAGTCCTGGGTTCATCCCT
CCTAAGAATGCAGCTTACATAATAGAGGCAGCTGCTAAAATATACCAGCAGAGTCCTCGA
CCCGCTGCCAGAGAAAAGGTGCAATCTTCTGGGTCTTCCTCTGCCCCTTTGAGAATACGG
GACTTGAGAGATCAAATAGAGGCTGTTCAGAGACAGTCTAGTATTTATGAAGCACTGCAC
AGGCCAAAAGAACAAAATTCTGTAAAAAACGTCAGAAGACAACCCTGTGAAAGAGTCCAG
GTTCAATCAGATAATATGCGTCAATTGAGGGTTTCTGAGGTATCAAGAAGAGATATATCC
CAAAATAAGGGGAAGGAGAAGTCAGTTTCACTAGCAGTTCAGGCAAAGACCAATATTCAG
AAAAGAGAGGGGAAGGAATCTACCTCTAGTAAGAACCCATCAAACCAGAAAGAACAGAAT
GAGTCTAAGTCTGGTCGGAGGCGGCCAAGTGTAAAAGGGGGGGAAAGGAAAAATTCACTC
AACCGGCCTTCTGATGTGCTCAGGCAGAACAACCAGAAGCAGAACTCTGCATCTAATAAA
GACGGGGAGAGTTCGAAAACTTCAGCTCCCTACCAAAAAGAGAAAAAATTATCATCTACT
GGTAACATGTCTAGGTCAACCAAGACTGTAAGTAGAATTGTTGTAAATACCACAACTGCT
ACCGGAATTGCAAGTATTGTAGAAACTGACGTTGGAAAGGACCTTTCATCATCTAGGGAC
TCCAGAGTGAGTTCCTTTACTGGAAAGAAACAGTCAGTCAATGTCGATATTGGTTCTGAT
GGATGTGGTGCTGACAATATGATGAAGAGTAAAGATGAGAGGTCTATAAAATGTAACTTA
GCTATTGAAGGATGCTCCAATTGGGAAACAGCTGACAGGAAAAATGGGAGTGATGTAGTG
TCATTTACTTTCACCTCACCCATCAAAAAATCAATGACTGGCCCCACATCATCAAGTCAT
GTTTTGGAAAAGAACAATGCTTTGTGTCTCTTTCCAGGTTCTTATGATGATCAGTCTGAT
TCAAGGACATCAACAATGCCTTCTTTTCCCATTGGTGGTGATGATTTAGGTATTCTCTTA
GAACAAAAGATTAAAGAATTAACTTCTAAAGTCAGACCATCTTGTGAAGATTTCATCAAA
ACGGGGACTGCTTCTATTTCTGCCAGTACTTTTGAAGATAGTGTGTCCATTGTAGCACAT
GGGAGGAGACCTCAAGTTGATTTGCTTAATGAAAAAGCAGGTGACCATGGTCACTCTTCT
GTTGATGACCTCCGGCTTACTGCAACTCAGATGTGGCAGGGTCCAAATAGGGTAGAAAAT
CCTAAAACTGCCAGCAGATTTACGTGTGAAGGAGAATTTAGTCTCCCTTGCACTAGTCTG
GCCTCAAGTATGGAACCTTCTATCTCAGGAGGCAGTTGCAACTCTTTGGATAGCTACAGA
AGTTTAGCCACTGATGGGAGCAAGTATCATCTGTCTGATGGATCTCACGAAATGATGAAT
TGGAAAACCTACATGAGGACCCATTTTGTGGAAGGTGATGCAGAGTTGTTGGACTCAGCC
TCTTCCGTTTCTCTTGCTGATGCAGGTGAAAAGGATTCAACTGCTACATCGACTTCCACA
AATTTCAATGAATCACCTTACTGGGAGTTTAATTATATCAGAGATATAATTAGAAGCTCA
GACTTGGTAATGGAAGAATTCTTGTTGGGTGAGGTTCCGAGCATTATTGCTCTTGATCTC
TTTGACAAGTTGGAGAATCAGAAGGCTGGAACCAACAAAAATGCAGAGGAGCAGCTGAAG
ATTCGGAGAAGAGTTTTGTTCTATTCGGTAGTCGAATGCCTGGAACTCAGATGCAAACTG
AGTTTTGGCAGAGGTGTTGAAGCTTGGGCAAAGTGGACAACATTGGTCCAAAGAAATGAG
TGGTTAGCAGAAGAAGTGTATAGAGAGATTGCTAGCTGGACAAGCATGGAAGAGTTGATG
GTGGATGAGATTGTTGACAAGGACATGAGCACTCAATACGGGAAGTGGACCGATTTTAGC
TTTGAAGCCTACGAAGAGGGTGTTGACATTGAGAAGGAGATCCTTTCATCTTTGATGGAT
GAATTGATCGGTGCCCTAATGTGA