Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007274
CDS Infomation

pacid=37439727 polypeptide=PGSC0003DMP400005063 locus=PGSC0003DMG400002799 ID=PGSC0003DMT400007274.v4.03 annot-version=v4.03
Sequence

ATGGCTAGTGAATCCAAGTCTCAAGTGTTGTTGAGTTTCAAAGGCAATACCTTCGCAGAT
CATCTCTACGAAGCTCTAGCTGGAGCAGGTTTTGTAACATTAAGAGGTGGCGATGGAAAC
GAGGGAGGAGAAGAAATCAAATTGAAATTACGAAAGGGTGTTGAAGAATCAGGGATTTCA
ATTATAATCTTTTCAAATGATTATGTGTCTTCAAGTTTGTGTCTTGATGAGTTGGTAATG
ATCTTGAATTGTAGTAAAAGGAGATCAGTTCTGCCAATATTTTACCATGTGGATCCTTCT
GATGTTAGGAAACAAAAGGGGAGAATTGGAGAAGCATTTGATAGGTATGAAGAAGCTAAG
GTTAGAAAATGGAAGGAAGCACTCAAACAAGTTGCAGATTTGGGAGGAATGGTCTTACAG
AACCAAGCTGATGGACATGAGTCAAAATTCATACAGAAGATCCTTAAAGTGGTTGAGAAT
AAACTGAGCAGGCCAGTCCTGTATATTTGCCCTCATCTGATTGGAATAGAACGGCGTGTT
GAAAAGATCAACTCATGGCTAGAGGATGGATCTACTGATGTTGACACTCTTGTTATCTGT
GGCATTGGTGGAATAGGCAAGACAACAATGGCAAAGTATGTGTATAATTTGAACTATAGT
AAGTTTGATGGTAGCAGCTTTTTGTCCAACATTAGAGAAAATTCAACACACCATAAAGGT
TTTGTTACTCTTCAAAGGCAATTTCTTTCTGATATTTGCAAGAGAAAGAAGAAACCTATG
TTTTCTGTGGACGAGGGAATGACTGAGATGAGAGATGCTGTAAGTTGTAAAAGAATCCTT
CTTGTTCTTGATGATGTTGATAGTCGTGACCAATTGGATGCTCTACTGGAAATGAAGGAC
TTGTTATACCCTGGAAGTAAAGTCATAGTGACAACTAGGAACAAGAGATTGCTTAGGCCT
TTTGATGTGCATAAGCTTTACGAGTTTGAAGCTTTGAATAGAGATGAATCAGTTGAGCTC
TTAAGTTGGCATGCATTTGGTCAAGATTGTCCTATTAAAGGTTTTGAAGTGTGTTCAGAA
CAAGTAGCAATCCATTGTGGAGGACTTCCATTAGCACTTGAAGTTCTTGGTGCTACTTTG
GCAGGAAGAAACATAGATATTTGGAGAAGTACAATACAGAAATTAGAAACAATTCCGAAT
CATCAAATTCTCAAGAAATTAGCAATAAGTTATGAATCTCTGGAGGATGATCATGATAAA
AATTTGTTTCTCCACCTAGCTTGCTTTTTCATTGGGAAGGACAGAGATTTAGTAATAGCT
ATTCTCAATAGGTGCAACTTTTACACTGTAATTGGAATAGAGAATCTCGTTGACAGAAAT
TTTGTAAAAATTAGTGAGTCTAACAGGTTGATTATGCATCAAATGATTCGAGATATGGGA
AGAGACATTGTTCGCCAAGAATCACCAATGGAGCCTGGGAAACGCTCTAGACTATGGCGC
TCCAAGGATTCCTATAATGTCTTAATCCAGAACCTTGCCACTCAAACAATTCAGGGCATT
ATCCTTGACATGGATATGCTCAAGGAAAATGACATAATTAGATCAAGCTTTTCTCCCATT
GATTTCAAGAAACACAAAACAAAGAACTTTCTCAACTATCCTAATCCTCAGAGAGGTCAA
TGGCATTTGTCAGATGCCAAAGAAGTCACAAATGAGCTGGTTCTGGAAACTGTTGTGTTT
GAAAAAATGCAAAAGTTAAGACTGCTCCAGTTCGATCACGTTGAGCTTCAAGGATCTTTT
GATGTTTTTCCTAAGAGATTAAGATGGTTGCGCTGGTCAGAGCTGCAACTAGAATGCATG
CCAATTGATTTTCCTCTGGAGAGCCTTGTAGTGATTGAATTACAACGTAGCAGATTGAGG
AAAATTTGGCATGGAGTCAAGTTCCTTAAATATCTGAAGATTTTCGATCTCAGCCATTCC
TACGAGCTTCTAAGAACACCTGATTTCTCTGGACTACCCAACCTTGAGAAATTGATCCTT
CGATATTGTACAAGCTTAATTGAGCTTCATGAGACCATTGGATGTCTCGAATCACTTGTT
CTGTTGAACCTCAAAAATTGCAAAAATCTGCAGAGACTTCCAGATAGCATTTGCATGCTA
AAATGTCTGGTCACACTAAATATCTCTGGTTGCTCAAGTCTTGAATATGTACCGATGGAT
CTAGATAAAGTAGATTCACTGAGAGAGCTCTATGCTGATGAAATTGCAGTTCATCAAATG
GTTTCTACTGCAGAAGAGGTCCAACCGTGGTATGGATTCCTGCGGTCCTGGATGTGCAAG
GGGACAATATGTCCTAAAGTTTCACACATTAGTTTACCCAATTCTTTGGTTACTTTGAGT
CTTGCTAAATGTAATCTATCCGATGATACTTTTCCAGTTGCTTTCAATAGCCTCTCGTTA
TTGCAAAACTTAGATTTGAGCCAAAATAAAATTTGCAGTCTACCAAAGGGCATAAGTTAT
CTTACTAGACTTCAGAAGCTAGAAGTGGAAGGCTGTGAAAAGCTCAAATCTCTCATAGGG
CTTCCCAATATAGAACATCTCAATGTTACTAACTGCAGCTTGTTAGAGAAAATATCATAT
CAATCTAAATCATCTAGTCTGAAGAATTTGCTGGTCTCAAATTGTGTTGAATTAGTGGAA
ATAGATGGAAATTTCAAGTTAGAGCCCTTGAGAAATACTGAGGCAGAGATGCTTTCCAAG
CTAGGCTTGTGGAACTTGGCCCCTATGAACAATGTCATGATCAATCTTACATCTAATATA
CTGAGCTACTACCGAATACACGGTAAAGGGTGGACTCCAACAAGGAAGACAAAGAAAGTT
GTTCTTCAGGGACTGTACCAACCAGGCATCTTTAGCACTTTTCTTACAGGTGAAAGAGTT
CCTTCTTGGTTTAGCTCAAAGTTCACAAAAGAATCAAGTGCATCCTTCAAAGTACCTACT
TGCAATTCCAGAATTGAAGGATTGAGTTTTTGCATTGTGTACAAGCGTTCCACGATTGGG
CTCTCACCGAGCATTCTCCGTCCCCCACTGCTAACTCCACCTCCAAGAATTTCTCCTCTT
GCCATACGCAAAGCTCAAGGAAGACCACTTCGTTACCGGCCAGTGGAAAATAAACCATAT
GAATCAACTTTTGATTGTCCATGCATCACAGTTAATAACTCAACTCAGAGTCTGATATGG
TCTTACCAGCCCTTGTTCTATGGAGTTCCGGGAGGGAGAGAAGGAATGATGTGGTTAAGC
CATTGGAAACTCGAGAATCAGTTGAGCAGTGATGACGTTATAGAGGTCACAGTTACCGCA
GGAGATGGAATCACAGTTATGGAATTTGGGATCAAAATTGTGCATGTTGAAGAGACAAAA
GTGCTAGGGAAACCAGGCTGTGAAGATGCAAGTGCAGAGAGAGCTATTGTCAATCCATTT
TGGGATGTTAATTTGGTACATGCCAGTTCAAAGGATACTTTTTCTGTCCGTCTTCCTCCT
ACTTATCGTTCCTTACGTGCTGCTCATGAGCCATTTATGGAGAAGGCACTTAAGAGAAAT
ATGTCAGACTATAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005063
PEP Infomation

pacid=37439727 transcript=PGSC0003DMT400007274 locus=PGSC0003DMG400002799 ID=PGSC0003DMT400007274.v4.03 annot-version=v4.03
Sequence

MASESKSQVLLSFKGNTFADHLYEALAGAGFVTLRGGDGNEGGEEIKLKLRKGVEESGIS
IIIFSNDYVSSSLCLDELVMILNCSKRRSVLPIFYHVDPSDVRKQKGRIGEAFDRYEEAK
VRKWKEALKQVADLGGMVLQNQADGHESKFIQKILKVVENKLSRPVLYICPHLIGIERRV
EKINSWLEDGSTDVDTLVICGIGGIGKTTMAKYVYNLNYSKFDGSSFLSNIRENSTHHKG
FVTLQRQFLSDICKRKKKPMFSVDEGMTEMRDAVSCKRILLVLDDVDSRDQLDALLEMKD
LLYPGSKVIVTTRNKRLLRPFDVHKLYEFEALNRDESVELLSWHAFGQDCPIKGFEVCSE
QVAIHCGGLPLALEVLGATLAGRNIDIWRSTIQKLETIPNHQILKKLAISYESLEDDHDK
NLFLHLACFFIGKDRDLVIAILNRCNFYTVIGIENLVDRNFVKISESNRLIMHQMIRDMG
RDIVRQESPMEPGKRSRLWRSKDSYNVLIQNLATQTIQGIILDMDMLKENDIIRSSFSPI
DFKKHKTKNFLNYPNPQRGQWHLSDAKEVTNELVLETVVFEKMQKLRLLQFDHVELQGSF
DVFPKRLRWLRWSELQLECMPIDFPLESLVVIELQRSRLRKIWHGVKFLKYLKIFDLSHS
YELLRTPDFSGLPNLEKLILRYCTSLIELHETIGCLESLVLLNLKNCKNLQRLPDSICML
KCLVTLNISGCSSLEYVPMDLDKVDSLRELYADEIAVHQMVSTAEEVQPWYGFLRSWMCK
GTICPKVSHISLPNSLVTLSLAKCNLSDDTFPVAFNSLSLLQNLDLSQNKICSLPKGISY
LTRLQKLEVEGCEKLKSLIGLPNIEHLNVTNCSLLEKISYQSKSSSLKNLLVSNCVELVE
IDGNFKLEPLRNTEAEMLSKLGLWNLAPMNNVMINLTSNILSYYRIHGKGWTPTRKTKKV
VLQGLYQPGIFSTFLTGERVPSWFSSKFTKESSASFKVPTCNSRIEGLSFCIVYKRSTIG
LSPSILRPPLLTPPPRISPLAIRKAQGRPLRYRPVENKPYESTFDCPCITVNNSTQSLIW
SYQPLFYGVPGGREGMMWLSHWKLENQLSSDDVIEVTVTAGDGITVMEFGIKIVHVEETK
VLGKPGCEDASAERAIVNPFWDVNLVHASSKDTFSVRLPPTYRSLRAAHEPFMEKALKRN
MSDYN*

Transcript Sequence

Transcript ID

PGSC0003DMT400007274
Transcript Infomation

pacid=37439727 locus=PGSC0003DMG400002799 ID=PGSC0003DMT400007274.v4.03 annot-version=v4.03
Sequence

ATGGCTAGTGAATCCAAGTCTCAAGTGTTGTTGAGTTTCAAAGGCAATACCTTCGCAGAT
CATCTCTACGAAGCTCTAGCTGGAGCAGGTTTTGTAACATTAAGAGGTGGCGATGGAAAC
GAGGGAGGAGAAGAAATCAAATTGAAATTACGAAAGGGTGTTGAAGAATCAGGGATTTCA
ATTATAATCTTTTCAAATGATTATGTGTCTTCAAGTTTGTGTCTTGATGAGTTGGTAATG
ATCTTGAATTGTAGTAAAAGGAGATCAGTTCTGCCAATATTTTACCATGTGGATCCTTCT
GATGTTAGGAAACAAAAGGGGAGAATTGGAGAAGCATTTGATAGGTATGAAGAAGCTAAG
GTTAGAAAATGGAAGGAAGCACTCAAACAAGTTGCAGATTTGGGAGGAATGGTCTTACAG
AACCAAGCTGATGGACATGAGTCAAAATTCATACAGAAGATCCTTAAAGTGGTTGAGAAT
AAACTGAGCAGGCCAGTCCTGTATATTTGCCCTCATCTGATTGGAATAGAACGGCGTGTT
GAAAAGATCAACTCATGGCTAGAGGATGGATCTACTGATGTTGACACTCTTGTTATCTGT
GGCATTGGTGGAATAGGCAAGACAACAATGGCAAAGTATGTGTATAATTTGAACTATAGT
AAGTTTGATGGTAGCAGCTTTTTGTCCAACATTAGAGAAAATTCAACACACCATAAAGGT
TTTGTTACTCTTCAAAGGCAATTTCTTTCTGATATTTGCAAGAGAAAGAAGAAACCTATG
TTTTCTGTGGACGAGGGAATGACTGAGATGAGAGATGCTGTAAGTTGTAAAAGAATCCTT
CTTGTTCTTGATGATGTTGATAGTCGTGACCAATTGGATGCTCTACTGGAAATGAAGGAC
TTGTTATACCCTGGAAGTAAAGTCATAGTGACAACTAGGAACAAGAGATTGCTTAGGCCT
TTTGATGTGCATAAGCTTTACGAGTTTGAAGCTTTGAATAGAGATGAATCAGTTGAGCTC
TTAAGTTGGCATGCATTTGGTCAAGATTGTCCTATTAAAGGTTTTGAAGTGTGTTCAGAA
CAAGTAGCAATCCATTGTGGAGGACTTCCATTAGCACTTGAAGTTCTTGGTGCTACTTTG
GCAGGAAGAAACATAGATATTTGGAGAAGTACAATACAGAAATTAGAAACAATTCCGAAT
CATCAAATTCTCAAGAAATTAGCAATAAGTTATGAATCTCTGGAGGATGATCATGATAAA
AATTTGTTTCTCCACCTAGCTTGCTTTTTCATTGGGAAGGACAGAGATTTAGTAATAGCT
ATTCTCAATAGGTGCAACTTTTACACTGTAATTGGAATAGAGAATCTCGTTGACAGAAAT
TTTGTAAAAATTAGTGAGTCTAACAGGTTGATTATGCATCAAATGATTCGAGATATGGGA
AGAGACATTGTTCGCCAAGAATCACCAATGGAGCCTGGGAAACGCTCTAGACTATGGCGC
TCCAAGGATTCCTATAATGTCTTAATCCAGAACCTTGCCACTCAAACAATTCAGGGCATT
ATCCTTGACATGGATATGCTCAAGGAAAATGACATAATTAGATCAAGCTTTTCTCCCATT
GATTTCAAGAAACACAAAACAAAGAACTTTCTCAACTATCCTAATCCTCAGAGAGGTCAA
TGGCATTTGTCAGATGCCAAAGAAGTCACAAATGAGCTGGTTCTGGAAACTGTTGTGTTT
GAAAAAATGCAAAAGTTAAGACTGCTCCAGTTCGATCACGTTGAGCTTCAAGGATCTTTT
GATGTTTTTCCTAAGAGATTAAGATGGTTGCGCTGGTCAGAGCTGCAACTAGAATGCATG
CCAATTGATTTTCCTCTGGAGAGCCTTGTAGTGATTGAATTACAACGTAGCAGATTGAGG
AAAATTTGGCATGGAGTCAAGTTCCTTAAATATCTGAAGATTTTCGATCTCAGCCATTCC
TACGAGCTTCTAAGAACACCTGATTTCTCTGGACTACCCAACCTTGAGAAATTGATCCTT
CGATATTGTACAAGCTTAATTGAGCTTCATGAGACCATTGGATGTCTCGAATCACTTGTT
CTGTTGAACCTCAAAAATTGCAAAAATCTGCAGAGACTTCCAGATAGCATTTGCATGCTA
AAATGTCTGGTCACACTAAATATCTCTGGTTGCTCAAGTCTTGAATATGTACCGATGGAT
CTAGATAAAGTAGATTCACTGAGAGAGCTCTATGCTGATGAAATTGCAGTTCATCAAATG
GTTTCTACTGCAGAAGAGGTCCAACCGTGGTATGGATTCCTGCGGTCCTGGATGTGCAAG
GGGACAATATGTCCTAAAGTTTCACACATTAGTTTACCCAATTCTTTGGTTACTTTGAGT
CTTGCTAAATGTAATCTATCCGATGATACTTTTCCAGTTGCTTTCAATAGCCTCTCGTTA
TTGCAAAACTTAGATTTGAGCCAAAATAAAATTTGCAGTCTACCAAAGGGCATAAGTTAT
CTTACTAGACTTCAGAAGCTAGAAGTGGAAGGCTGTGAAAAGCTCAAATCTCTCATAGGG
CTTCCCAATATAGAACATCTCAATGTTACTAACTGCAGCTTGTTAGAGAAAATATCATAT
CAATCTAAATCATCTAGTCTGAAGAATTTGCTGGTCTCAAATTGTGTTGAATTAGTGGAA
ATAGATGGAAATTTCAAGTTAGAGCCCTTGAGAAATACTGAGGCAGAGATGCTTTCCAAG
CTAGGCTTGTGGAACTTGGCCCCTATGAACAATGTCATGATCAATCTTACATCTAATATA
CTGAGCTACTACCGAATACACGGTAAAGGGTGGACTCCAACAAGGAAGACAAAGAAAGTT
GTTCTTCAGGGACTGTACCAACCAGGCATCTTTAGCACTTTTCTTACAGGTGAAAGAGTT
CCTTCTTGGTTTAGCTCAAAGTTCACAAAAGAATCAAGTGCATCCTTCAAAGTACCTACT
TGCAATTCCAGAATTGAAGGATTGAGTTTTTGCATTGTGTACAAGCGTTCCACGATTGGG
CTCTCACCGAGCATTCTCCGTCCCCCACTGCTAACTCCACCTCCAAGAATTTCTCCTCTT
GCCATACGCAAAGCTCAAGGAAGACCACTTCGTTACCGGCCAGTGGAAAATAAACCATAT
GAATCAACTTTTGATTGTCCATGCATCACAGTTAATAACTCAACTCAGAGTCTGATATGG
TCTTACCAGCCCTTGTTCTATGGAGTTCCGGGAGGGAGAGAAGGAATGATGTGGTTAAGC
CATTGGAAACTCGAGAATCAGTTGAGCAGTGATGACGTTATAGAGGTCACAGTTACCGCA
GGAGATGGAATCACAGTTATGGAATTTGGGATCAAAATTGTGCATGTTGAAGAGACAAAA
GTGCTAGGGAAACCAGGCTGTGAAGATGCAAGTGCAGAGAGAGCTATTGTCAATCCATTT
TGGGATGTTAATTTGGTACATGCCAGTTCAAAGGATACTTTTTCTGTCCGTCTTCCTCCT
ACTTATCGTTCCTTACGTGCTGCTCATGAGCCATTTATGGAGAAGGCACTTAAGAGAAAT
ATGTCAGACTATAACTAA