Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007271
CDS Infomation

pacid=37435389 polypeptide=PGSC0003DMP400005060 locus=PGSC0003DMG400002798 ID=PGSC0003DMT400007271.v4.03 annot-version=v4.03
Sequence

ATGGTGAGCAAAGCTATCTGTTTGAAGCTTCTCCGATCAACAACTTATCGCCGATGTTTC
TCAACAGAAACGGCGGTGGCGGAGACCGTATCAACGCCGTCCATCAGCCAAAGAAAACGA
ATAAGCGACGGTCGCCGGAAATTGTCGGACCTTATCAATAGAGCAGACTCTGAATCTAAC
TTCAAAGATGCTTTAAACAAATTGGATAACGAAGGGGAATCCATACAAAAGCTAGACATT
ATTGGCTGTATCAACAATCTCCGTAGAACCGATAGGTTTGATCTTGCCCTTCAGCTGTCT
GAATGGATGGAAAGCAGCAAAATTATGATCAGCAATGGTGATCGGGCAATACGGATACAC
CTTCTTGCCAACACAAAGGGAACAGATTCAGCCGAAATGTATTTTGACAGCCTGCAAGAA
TCTGAAAAAACTAGTAAGACCTATGGAGCACTTCTCAGCTCTTATTGCAGGCAGAAAATG
TTTGATAAAGTGTCAAAGCTTTTTGAGAAGATGAAGGAGCTTAATTTTACATCTACTTTA
AATTATAACAATGTGATATCTCTTCATTTAAGAAATGGCCAGCCTGAAAAAGTCTCTGCA
CTGGTTCAAGAAATGGAGCAGAGAAATATTGCAGTTGATATGTTCACCTATAATCAGTTG
ATGAACAGTTATGCTTTAGTGAAGGATATAGTATCAGTTGAGGCTGTTGTTGAAAAGATG
GAAAAGCATCAGGTAAAGTTTGACTGGCTCACATATGGAAACCTAGCTGGGATATATATC
AATACCGGCTACCTTGATAAGGCGAATGATATTCTCCAAAAGATGGAGAAAATGAAAGAT
ATGCATGACCGTGAAGCTTTCCATACCTTAATCACATTATATCAGAAAACATCTAATCCA
TCAGGAGTCAATCGCTCATGGGAATTACTAAAGTCAGTTTTCCCAACTCCCAGCAAGTTT
AGCTATCTCATCGTGCTTTTGGCTCTATCCAAACTGGGGGACTCGGAAACCCTTGAGAAA
CGTTTTAGAGAATGGGAGTCAGGTTGTAAATTCTATGACATCAGAGTTTCAAATGTGATG
ATGGAGTCCTATCTTGACAGAAATATGATCGAAGAAGCAAATTTGCTTTATCAGAATGTG
TTGAAACAAGGCGTTGAACCCAACTTAAGGACTTACGATGCATTCACAAATTTCTATATA
AAAAATTCGCAGATAGACTTTGCTCTGAAGTATTTGGAGATGGGTGCCAGCAAGGCAAAT
CCTAAGAAAAAAGTTTGGTTTCCTAAGGATGAATCCATCAAGATGTTTCTAGCTTATTTT
GAGGACGACAATAATGACCCTGTTAGAGTTGAGAAGTTCTGCGAGATTATGAAGAAGATT
AATCGCCTCGATTCCAGTGTTTATGACTCTCTTCTACGCCCAAACTCTGCAGCCTCTGAA
GTGGAACTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400005060
PEP Infomation

pacid=37435389 transcript=PGSC0003DMT400007271 locus=PGSC0003DMG400002798 ID=PGSC0003DMT400007271.v4.03 annot-version=v4.03
Sequence

MVSKAICLKLLRSTTYRRCFSTETAVAETVSTPSISQRKRISDGRRKLSDLINRADSESN
FKDALNKLDNEGESIQKLDIIGCINNLRRTDRFDLALQLSEWMESSKIMISNGDRAIRIH
LLANTKGTDSAEMYFDSLQESEKTSKTYGALLSSYCRQKMFDKVSKLFEKMKELNFTSTL
NYNNVISLHLRNGQPEKVSALVQEMEQRNIAVDMFTYNQLMNSYALVKDIVSVEAVVEKM
EKHQVKFDWLTYGNLAGIYINTGYLDKANDILQKMEKMKDMHDREAFHTLITLYQKTSNP
SGVNRSWELLKSVFPTPSKFSYLIVLLALSKLGDSETLEKRFREWESGCKFYDIRVSNVM
MESYLDRNMIEEANLLYQNVLKQGVEPNLRTYDAFTNFYIKNSQIDFALKYLEMGASKAN
PKKKVWFPKDESIKMFLAYFEDDNNDPVRVEKFCEIMKKINRLDSSVYDSLLRPNSAASE
VEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400007271
Transcript Infomation

pacid=37435389 locus=PGSC0003DMG400002798 ID=PGSC0003DMT400007271.v4.03 annot-version=v4.03
Sequence

ATGGTGAGCAAAGCTATCTGTTTGAAGCTTCTCCGATCAACAACTTATCGCCGATGTTTC
TCAACAGAAACGGCGGTGGCGGAGACCGTATCAACGCCGTCCATCAGCCAAAGAAAACGA
ATAAGCGACGGTCGCCGGAAATTGTCGGACCTTATCAATAGAGCAGACTCTGAATCTAAC
TTCAAAGATGCTTTAAACAAATTGGATAACGAAGGGGAATCCATACAAAAGCTAGACATT
ATTGGCTGTATCAACAATCTCCGTAGAACCGATAGGTTTGATCTTGCCCTTCAGCTGTCT
GAATGGATGGAAAGCAGCAAAATTATGATCAGCAATGGTGATCGGGCAATACGGATACAC
CTTCTTGCCAACACAAAGGGAACAGATTCAGCCGAAATGTATTTTGACAGCCTGCAAGAA
TCTGAAAAAACTAGTAAGACCTATGGAGCACTTCTCAGCTCTTATTGCAGGCAGAAAATG
TTTGATAAAGTGTCAAAGCTTTTTGAGAAGATGAAGGAGCTTAATTTTACATCTACTTTA
AATTATAACAATGTGATATCTCTTCATTTAAGAAATGGCCAGCCTGAAAAAGTCTCTGCA
CTGGTTCAAGAAATGGAGCAGAGAAATATTGCAGTTGATATGTTCACCTATAATCAGTTG
ATGAACAGTTATGCTTTAGTGAAGGATATAGTATCAGTTGAGGCTGTTGTTGAAAAGATG
GAAAAGCATCAGGTAAAGTTTGACTGGCTCACATATGGAAACCTAGCTGGGATATATATC
AATACCGGCTACCTTGATAAGGCGAATGATATTCTCCAAAAGATGGAGAAAATGAAAGAT
ATGCATGACCGTGAAGCTTTCCATACCTTAATCACATTATATCAGAAAACATCTAATCCA
TCAGGAGTCAATCGCTCATGGGAATTACTAAAGTCAGTTTTCCCAACTCCCAGCAAGTTT
AGCTATCTCATCGTGCTTTTGGCTCTATCCAAACTGGGGGACTCGGAAACCCTTGAGAAA
CGTTTTAGAGAATGGGAGTCAGGTTGTAAATTCTATGACATCAGAGTTTCAAATGTGATG
ATGGAGTCCTATCTTGACAGAAATATGATCGAAGAAGCAAATTTGCTTTATCAGAATGTG
TTGAAACAAGGCGTTGAACCCAACTTAAGGACTTACGATGCATTCACAAATTTCTATATA
AAAAATTCGCAGATAGACTTTGCTCTGAAGTATTTGGAGATGGGTGCCAGCAAGGCAAAT
CCTAAGAAAAAAGTTTGGTTTCCTAAGGATGAATCCATCAAGATGTTTCTAGCTTATTTT
GAGGACGACAATAATGACCCTGTTAGAGTTGAGAAGTTCTGCGAGATTATGAAGAAGATT
AATCGCCTCGATTCCAGTGTTTATGACTCTCTTCTACGCCCAAACTCTGCAGCCTCTGAA
GTGGAACTATGA