Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007160
CDS Infomation

pacid=37438281 polypeptide=PGSC0003DMP400004971 locus=PGSC0003DMG400002769 ID=PGSC0003DMT400007160.v4.03 annot-version=v4.03
Sequence

ATGACATCAATTCTCGAAGAAATTAGCAACGAGAACAACTTAATATCCAGCTCATGTCAC
AGTAGTGAAATTGGAGCTGATCCAGAACTTGATAAGTTTATGGAATCATATTGTGCGGTA
TTAGTGAAATACAAAGAGGAGCTTTCAAAGCCGTTTGATGAAGCTACAAGTTTCTTGAAT
AACATAAAGTCACAGCTCAGTTCCCTATGCAAAGATAATTTAATTACTTCAACAAGTTTC
AACTCCAACAACAATTATATATCTGATGAAGCAGGTGGTACCTCAGAGGAGGATCTAGGC
TGTGAGGAGATGGAAGCAGCGGATAGTCCTGCTAACCGTGAAGGCGATAATGAGCTAAAA
GAAATGCTGATGCGCAAATATAGTGGCTATCTTAGCAGTTTGAGAAAGGAATTTCTGAAG
AAGAGGAAGAAAGGCAAGTTACCTAAGGAAGCAAGAATTGTATTGCTGGACTGGTGGAAT
ACTCACTATCGATGGCCTTATCCCACGGAAGAAGAGAAAAATAGGCTATCAGAGATGACA
GGGCTAGACCAGAAGCAGATAAACAACTGGTTCATAAACCAAAGGAAGCGACACTGGCGG
CCATCGGAAGACATGAAATTTGCTCTAATGGAAGGTGTTAGTGCTGGATCGATGTATTTT
GATGGATCTGGAGGCACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004971
PEP Infomation

pacid=37438281 transcript=PGSC0003DMT400007160 locus=PGSC0003DMG400002769 ID=PGSC0003DMT400007160.v4.03 annot-version=v4.03
Sequence

MTSILEEISNENNLISSSCHSSEIGADPELDKFMESYCAVLVKYKEELSKPFDEATSFLN
NIKSQLSSLCKDNLITSTSFNSNNNYISDEAGGTSEEDLGCEEMEAADSPANREGDNELK
EMLMRKYSGYLSSLRKEFLKKRKKGKLPKEARIVLLDWWNTHYRWPYPTEEEKNRLSEMT
GLDQKQINNWFINQRKRHWRPSEDMKFALMEGVSAGSMYFDGSGGT*

Transcript Sequence

Transcript ID

PGSC0003DMT400007160
Transcript Infomation

pacid=37438281 locus=PGSC0003DMG400002769 ID=PGSC0003DMT400007160.v4.03 annot-version=v4.03
Sequence

ATGACATCAATTCTCGAAGAAATTAGCAACGAGAACAACTTAATATCCAGCTCATGTCAC
AGTAGTGAAATTGGAGCTGATCCAGAACTTGATAAGTTTATGGAATCATATTGTGCGGTA
TTAGTGAAATACAAAGAGGAGCTTTCAAAGCCGTTTGATGAAGCTACAAGTTTCTTGAAT
AACATAAAGTCACAGCTCAGTTCCCTATGCAAAGATAATTTAATTACTTCAACAAGTTTC
AACTCCAACAACAATTATATATCTGATGAAGCAGGTGGTACCTCAGAGGAGGATCTAGGC
TGTGAGGAGATGGAAGCAGCGGATAGTCCTGCTAACCGTGAAGGCGATAATGAGCTAAAA
GAAATGCTGATGCGCAAATATAGTGGCTATCTTAGCAGTTTGAGAAAGGAATTTCTGAAG
AAGAGGAAGAAAGGCAAGTTACCTAAGGAAGCAAGAATTGTATTGCTGGACTGGTGGAAT
ACTCACTATCGATGGCCTTATCCCACGGAAGAAGAGAAAAATAGGCTATCAGAGATGACA
GGGCTAGACCAGAAGCAGATAAACAACTGGTTCATAAACCAAAGGAAGCGACACTGGCGG
CCATCGGAAGACATGAAATTTGCTCTAATGGAAGGTGTTAGTGCTGGATCGATGTATTTT
GATGGATCTGGAGGCACTTGA