Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007150
CDS Infomation

pacid=37435294 polypeptide=PGSC0003DMP400004962 locus=PGSC0003DMG400002765 ID=PGSC0003DMT400007150.v4.03 annot-version=v4.03
Sequence

ATGGCACTGTATCTATTGTATGAGTCGGCGTCTGGGTACGGTTTGTTTTTGGCTCACGGG
ATTGATGAGATAGGGCAGAACACGGAGGCGGTTCGGAACTCAATCACTGACCTCAATCGC
TTTGGGAAAGTCGTAAAGCTTGAAGCTTTTAACCCTTTTGAGTCTGCCCTTGATGCCCTA
AATCAATGCAATGCTGTTTCTGAAGGTCAAATGACTGAGGAGCTACAGAACTTCTTGGAG
CGTAGTCTCCCAAAAGTCAAGGAGGGTAAGAAAGCTAAGTTCAGCTTAGGATTGGCAGAG
CCTAAGCTTGGGTCACATATCCATGAAGTAACTAAGATTCCTTGCCAAAGTAACGAGTTT
GTTCTTGAGATTTTGCGTGGAGTACGATTGCATTTTGAGAAGTTCATTGAAAACCTAAAG
CATGGTGATTTGGAGAAAGCCCAACTTGGTCTGAGTCACAGTTACAGCAGAGCAAAGGTC
AAGTTCAATGTCAATCGTGTTGACAATATGGTTACTCAGGCAATTGTCCTACTTGATACT
CTTGATAAAGATATAAATACCTTTTCCATGAGAGTCAGAGAGTGGTACTCTTGGCATTTC
CCAGAGTTGGTCAAGATTGTCAATGACAATTATCTATATGCCAAGGTTGCAAAATTCGTT
GATGACAAATCCCAATTGTCTGAAGACAAAATTTCAGCATTAACTGAAATAGTCGGAGAT
GAAGATAAAGCAAAAGAAATCGTAGAAGCTGCAAAAGCTTCCATGGGCCAGGATTTGTCA
CCAGTTGACTTGATTAATGTCAAGCTATTTGCACAGAGGGTAATGGACCTTGTTGAATAC
AGGAAGAATCTTTATGATTATCTTGTCGCCAAAATGCACGACATAGCACCAAATTTGGCT
GCTCTGATTGGTGAAGTCGTGGGTGCTCGTTTAATTTCTCATGCTGGTAGTCTCACAAAT
TTGGCGAAGTGCCCTTCTTCTACCCTTCAGATCCTGGGTGCTGAGAAGGCACTCTTCAGG
GCCTTGAAAACCAAAGGAAATACACCAAAATATGGACTCATATTCCATTCTTCTTTCATT
GGCCGTGCTTCTGCTCGTAATAAAGGTCGAATGGCTCGTTATCTTGCAAACAAGTGTTCT
ATTGCTTCTCGTCTCGACTGTTTCTTAGATAAGAGTACTACTACTTTTGGAGAGAAACTC
CGTGAACAAGTTGAGGAGCGTCTAGACTTCTATGACAAGGGGGTTGCACCACGAAAAAAC
CTAGATGTGATGAAAGCTGCTATTGAAACCGTCGAAGATAAAGACACAGAAATGGACGTA
GATGAGCTTTCCACAAAGAAAAGCAAGAAAAAGAAATCCAAAGTTGATGTGGTGGAATAT
GCTCAACCCATGATCGAGGATAAACCACTTGAAACAAATGGTGATGCCTCTGAAGAACCC
AAGTCTGAAAAGAAAAAGAAGAAGAAGGAGAAGCGGAAATCAGAACAGGAGGCAGAGCAT
GAAGAGGATCAGACTGTTGATAATGGTAATGGTGTGCATGAGGATGGAACAGCAAAGAAG
AAGAAGAAAAAGAAGAACAAGGAGGACAATGGAGAGGAACTCCAAGCTGCTGTTGAAATT
AAAAAGAAGAAAAAGAAGTCCAAAGTCCAAGATGATGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400004962
PEP Infomation

pacid=37435294 transcript=PGSC0003DMT400007150 locus=PGSC0003DMG400002765 ID=PGSC0003DMT400007150.v4.03 annot-version=v4.03
Sequence

MALYLLYESASGYGLFLAHGIDEIGQNTEAVRNSITDLNRFGKVVKLEAFNPFESALDAL
NQCNAVSEGQMTEELQNFLERSLPKVKEGKKAKFSLGLAEPKLGSHIHEVTKIPCQSNEF
VLEILRGVRLHFEKFIENLKHGDLEKAQLGLSHSYSRAKVKFNVNRVDNMVTQAIVLLDT
LDKDINTFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFVDDKSQLSEDKISALTEIVGD
EDKAKEIVEAAKASMGQDLSPVDLINVKLFAQRVMDLVEYRKNLYDYLVAKMHDIAPNLA
ALIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSFI
GRASARNKGRMARYLANKCSIASRLDCFLDKSTTTFGEKLREQVEERLDFYDKGVAPRKN
LDVMKAAIETVEDKDTEMDVDELSTKKSKKKKSKVDVVEYAQPMIEDKPLETNGDASEEP
KSEKKKKKKEKRKSEQEAEHEEDQTVDNGNGVHEDGTAKKKKKKKNKEDNGEELQAAVEI
KKKKKKSKVQDDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400007150
Transcript Infomation

pacid=37435294 locus=PGSC0003DMG400002765 ID=PGSC0003DMT400007150.v4.03 annot-version=v4.03
Sequence

ATGGCACTGTATCTATTGTATGAGTCGGCGTCTGGGTACGGTTTGTTTTTGGCTCACGGG
ATTGATGAGATAGGGCAGAACACGGAGGCGGTTCGGAACTCAATCACTGACCTCAATCGC
TTTGGGAAAGTCGTAAAGCTTGAAGCTTTTAACCCTTTTGAGTCTGCCCTTGATGCCCTA
AATCAATGCAATGCTGTTTCTGAAGGTCAAATGACTGAGGAGCTACAGAACTTCTTGGAG
CGTAGTCTCCCAAAAGTCAAGGAGGGTAAGAAAGCTAAGTTCAGCTTAGGATTGGCAGAG
CCTAAGCTTGGGTCACATATCCATGAAGTAACTAAGATTCCTTGCCAAAGTAACGAGTTT
GTTCTTGAGATTTTGCGTGGAGTACGATTGCATTTTGAGAAGTTCATTGAAAACCTAAAG
CATGGTGATTTGGAGAAAGCCCAACTTGGTCTGAGTCACAGTTACAGCAGAGCAAAGGTC
AAGTTCAATGTCAATCGTGTTGACAATATGGTTACTCAGGCAATTGTCCTACTTGATACT
CTTGATAAAGATATAAATACCTTTTCCATGAGAGTCAGAGAGTGGTACTCTTGGCATTTC
CCAGAGTTGGTCAAGATTGTCAATGACAATTATCTATATGCCAAGGTTGCAAAATTCGTT
GATGACAAATCCCAATTGTCTGAAGACAAAATTTCAGCATTAACTGAAATAGTCGGAGAT
GAAGATAAAGCAAAAGAAATCGTAGAAGCTGCAAAAGCTTCCATGGGCCAGGATTTGTCA
CCAGTTGACTTGATTAATGTCAAGCTATTTGCACAGAGGGTAATGGACCTTGTTGAATAC
AGGAAGAATCTTTATGATTATCTTGTCGCCAAAATGCACGACATAGCACCAAATTTGGCT
GCTCTGATTGGTGAAGTCGTGGGTGCTCGTTTAATTTCTCATGCTGGTAGTCTCACAAAT
TTGGCGAAGTGCCCTTCTTCTACCCTTCAGATCCTGGGTGCTGAGAAGGCACTCTTCAGG
GCCTTGAAAACCAAAGGAAATACACCAAAATATGGACTCATATTCCATTCTTCTTTCATT
GGCCGTGCTTCTGCTCGTAATAAAGGTCGAATGGCTCGTTATCTTGCAAACAAGTGTTCT
ATTGCTTCTCGTCTCGACTGTTTCTTAGATAAGAGTACTACTACTTTTGGAGAGAAACTC
CGTGAACAAGTTGAGGAGCGTCTAGACTTCTATGACAAGGGGGTTGCACCACGAAAAAAC
CTAGATGTGATGAAAGCTGCTATTGAAACCGTCGAAGATAAAGACACAGAAATGGACGTA
GATGAGCTTTCCACAAAGAAAAGCAAGAAAAAGAAATCCAAAGTTGATGTGGTGGAATAT
GCTCAACCCATGATCGAGGATAAACCACTTGAAACAAATGGTGATGCCTCTGAAGAACCC
AAGTCTGAAAAGAAAAAGAAGAAGAAGGAGAAGCGGAAATCAGAACAGGAGGCAGAGCAT
GAAGAGGATCAGACTGTTGATAATGGTAATGGTGTGCATGAGGATGGAACAGCAAAGAAG
AAGAAGAAAAAGAAGAACAAGGAGGACAATGGAGAGGAACTCCAAGCTGCTGTTGAAATT
AAAAAGAAGAAAAAGAAGTCCAAAGTCCAAGATGATGAATAA