Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007146
CDS Infomation

pacid=37436808 polypeptide=PGSC0003DMP400004958 locus=PGSC0003DMG400002763 ID=PGSC0003DMT400007146.v4.03 annot-version=v4.03
Sequence

ATGGGATCTTTAGGTGGTGAAGTATCAGTATCAGTATCATTACAGAAGAAGAAGCCAATG
TGGTTATATCCAAAGGTGATGGGTGTTCATCCTTCTGAGAGATGGGGTCATTCTTCTTGT
AACTCTAATGGATTTGTCTATGTTTTTGGGGGATGTCGCGGGGGCTTACATTTTAGTGAT
GTACTTGTACTAAATCTTGAGGCAATGGCTTGGAGCATTCTTGTGACAACAGGGCAAGGA
CCGGGGCCAAGAGATAGCCACAGTGCTGTTCTTGTTGGTCACAGGATGGTGGTATTTGGG
GGTACAAATGGCTCAAGGAAGGTCAATGATATTCATGTATTGGATGTCAGGAGCCAAGAA
TGGACTCAACTCGAATGTCAAGGCAATCCACCTTCACCTCGTGAAAGTCACACGGCTACT
CTCGTTGGTGGTGATAAATTAGTGATCTTTGGTGGTAGTGGTGAAGGCGAGGCAAACTAT
TTGAATGATTTACATGTTTTGGACCTCAAAACTATGAGGTGGTCGTCTCCTGAAGTGAGG
GGTGAAATGCCTGTTCCTAGGGATAGTCACAGTGCTGTTGCGATTGGTAATAGGCTTTTT
ATATATGGCGGAGATTGTGGTGACCGATATCAAGGTGATGTTGATGTGCTTGATATGGAT
ACACTAATGTGGTCAAAGCTGGATGTTCTTGGACCGTCGCCTGGTGCTCGAGCCGGTCAT
GCCTCAGTGTATTTTGGGTCAAAGGTATATGTGATTGGTGGAGTTGGAGACAAGAAATAC
TACAATGATGTTTGGGTTCTTGATGTGATAAATTCTTCATGGACTCAGCTTGATGTAATG
GGCCAAAAACCACAGGGGCGATTTTCTCATACTGCTGCTTCCCGGAACACGGATATTGTA
ATCTATGGAGGGTGCGGCGAGGATGAGCGACCACTCAATGAGTTACTTATTTTGCAGTTC
GGAGTAGAATATCCTAATGGGACTAGCAGCTTATCTGGTGGCAGGGTTTCTGGAAATACA
AGTCATTATGATAAGAAAAGATTTCTGAGAGAAAGAGACAATAACTCGGAAGCTATATGT
AGGGGAAAGAAGGAAGATATACAAATGACGGGATCTCAAGAACATGAGTTCGTATCAAAA
GCAGCTTTTCGATTTAGTTCTGACACATTGCATCCAAAGAGGAGAAGAATGAGTCACAAT
TCACACATATTTAATCTGGAGTCAGATCAAGAAGAAGATCAGTCTCCTTCTCTATCTCAA
CGTTGTTCTCCTCAGTCCCAATCCGATGTAGAAATGAGTACTATTAAGCCAGTCTCTGGT
TCTGGAACTGCATCAGATCGGTTTCCTTTCGCAAGGCAGCAACATTTGATCCCAAACAAC
TGCCAACCAAACCCGAGGAATGTCATAGCAAGGAATCCTCATGATTTGCAATTATTTCGA
GAACAACCAAATCCGTCAAACTCATCAGGACATTTACCTGCCGTTCTTATGGATAAGCAG
GAAGTGCAATGCCAATCCTTAGAGCCTGGACGATTCCACAACTTGATTGGAGCTGAGATC
CGGGGAAAAGTCGATGGAGCATTTGACTCTGGTTATCTAATGACTGCCATTGTTAATGGA
AAGATCTTTCGAGGTGTTCTGTTTGCTCCGGCACCTGATCTAGTACCACGAGGACCCGTC
CTTGGTCAGAATCCTTCACCCTCTCCGGGACATATTGGTGTCAACTATGCAAACATACAC
ACGAATCATATAAGTCTGGGTTGTCGAAGGCAACCTCAGCAGTTGGTGCAAATGCAAGTT
CCAGAACTCGGACGACAGAGCATAGGGAAAGTACCAATTAGAAGATCAACATCATCAGTG
ATGAGATCATCTCATCAACTAGAGAAGGATACACAGAAAAGAAGTGAACTTGAAGGAGTG
GTGCTCACACTAGGAGGTCCAGGATGTGGCAATGCAAAAACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004958
PEP Infomation

pacid=37436808 transcript=PGSC0003DMT400007146 locus=PGSC0003DMG400002763 ID=PGSC0003DMT400007146.v4.03 annot-version=v4.03
Sequence

MGSLGGEVSVSVSLQKKKPMWLYPKVMGVHPSERWGHSSCNSNGFVYVFGGCRGGLHFSD
VLVLNLEAMAWSILVTTGQGPGPRDSHSAVLVGHRMVVFGGTNGSRKVNDIHVLDVRSQE
WTQLECQGNPPSPRESHTATLVGGDKLVIFGGSGEGEANYLNDLHVLDLKTMRWSSPEVR
GEMPVPRDSHSAVAIGNRLFIYGGDCGDRYQGDVDVLDMDTLMWSKLDVLGPSPGARAGH
ASVYFGSKVYVIGGVGDKKYYNDVWVLDVINSSWTQLDVMGQKPQGRFSHTAASRNTDIV
IYGGCGEDERPLNELLILQFGVEYPNGTSSLSGGRVSGNTSHYDKKRFLRERDNNSEAIC
RGKKEDIQMTGSQEHEFVSKAAFRFSSDTLHPKRRRMSHNSHIFNLESDQEEDQSPSLSQ
RCSPQSQSDVEMSTIKPVSGSGTASDRFPFARQQHLIPNNCQPNPRNVIARNPHDLQLFR
EQPNPSNSSGHLPAVLMDKQEVQCQSLEPGRFHNLIGAEIRGKVDGAFDSGYLMTAIVNG
KIFRGVLFAPAPDLVPRGPVLGQNPSPSPGHIGVNYANIHTNHISLGCRRQPQQLVQMQV
PELGRQSIGKVPIRRSTSSVMRSSHQLEKDTQKRSELEGVVLTLGGPGCGNAKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400007146
Transcript Infomation

pacid=37436808 locus=PGSC0003DMG400002763 ID=PGSC0003DMT400007146.v4.03 annot-version=v4.03
Sequence

ATGGGATCTTTAGGTGGTGAAGTATCAGTATCAGTATCATTACAGAAGAAGAAGCCAATG
TGGTTATATCCAAAGGTGATGGGTGTTCATCCTTCTGAGAGATGGGGTCATTCTTCTTGT
AACTCTAATGGATTTGTCTATGTTTTTGGGGGATGTCGCGGGGGCTTACATTTTAGTGAT
GTACTTGTACTAAATCTTGAGGCAATGGCTTGGAGCATTCTTGTGACAACAGGGCAAGGA
CCGGGGCCAAGAGATAGCCACAGTGCTGTTCTTGTTGGTCACAGGATGGTGGTATTTGGG
GGTACAAATGGCTCAAGGAAGGTCAATGATATTCATGTATTGGATGTCAGGAGCCAAGAA
TGGACTCAACTCGAATGTCAAGGCAATCCACCTTCACCTCGTGAAAGTCACACGGCTACT
CTCGTTGGTGGTGATAAATTAGTGATCTTTGGTGGTAGTGGTGAAGGCGAGGCAAACTAT
TTGAATGATTTACATGTTTTGGACCTCAAAACTATGAGGTGGTCGTCTCCTGAAGTGAGG
GGTGAAATGCCTGTTCCTAGGGATAGTCACAGTGCTGTTGCGATTGGTAATAGGCTTTTT
ATATATGGCGGAGATTGTGGTGACCGATATCAAGGTGATGTTGATGTGCTTGATATGGAT
ACACTAATGTGGTCAAAGCTGGATGTTCTTGGACCGTCGCCTGGTGCTCGAGCCGGTCAT
GCCTCAGTGTATTTTGGGTCAAAGGTATATGTGATTGGTGGAGTTGGAGACAAGAAATAC
TACAATGATGTTTGGGTTCTTGATGTGATAAATTCTTCATGGACTCAGCTTGATGTAATG
GGCCAAAAACCACAGGGGCGATTTTCTCATACTGCTGCTTCCCGGAACACGGATATTGTA
ATCTATGGAGGGTGCGGCGAGGATGAGCGACCACTCAATGAGTTACTTATTTTGCAGTTC
GGAGTAGAATATCCTAATGGGACTAGCAGCTTATCTGGTGGCAGGGTTTCTGGAAATACA
AGTCATTATGATAAGAAAAGATTTCTGAGAGAAAGAGACAATAACTCGGAAGCTATATGT
AGGGGAAAGAAGGAAGATATACAAATGACGGGATCTCAAGAACATGAGTTCGTATCAAAA
GCAGCTTTTCGATTTAGTTCTGACACATTGCATCCAAAGAGGAGAAGAATGAGTCACAAT
TCACACATATTTAATCTGGAGTCAGATCAAGAAGAAGATCAGTCTCCTTCTCTATCTCAA
CGTTGTTCTCCTCAGTCCCAATCCGATGTAGAAATGAGTACTATTAAGCCAGTCTCTGGT
TCTGGAACTGCATCAGATCGGTTTCCTTTCGCAAGGCAGCAACATTTGATCCCAAACAAC
TGCCAACCAAACCCGAGGAATGTCATAGCAAGGAATCCTCATGATTTGCAATTATTTCGA
GAACAACCAAATCCGTCAAACTCATCAGGACATTTACCTGCCGTTCTTATGGATAAGCAG
GAAGTGCAATGCCAATCCTTAGAGCCTGGACGATTCCACAACTTGATTGGAGCTGAGATC
CGGGGAAAAGTCGATGGAGCATTTGACTCTGGTTATCTAATGACTGCCATTGTTAATGGA
AAGATCTTTCGAGGTGTTCTGTTTGCTCCGGCACCTGATCTAGTACCACGAGGACCCGTC
CTTGGTCAGAATCCTTCACCCTCTCCGGGACATATTGGTGTCAACTATGCAAACATACAC
ACGAATCATATAAGTCTGGGTTGTCGAAGGCAACCTCAGCAGTTGGTGCAAATGCAAGTT
CCAGAACTCGGACGACAGAGCATAGGGAAAGTACCAATTAGAAGATCAACATCATCAGTG
ATGAGATCATCTCATCAACTAGAGAAGGATACACAGAAAAGAAGTGAACTTGAAGGAGTG
GTGCTCACACTAGGAGGTCCAGGATGTGGCAATGCAAAAACTTAA