Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007130
CDS Infomation

pacid=37437576 polypeptide=PGSC0003DMP400004946 locus=PGSC0003DMG400002759 ID=PGSC0003DMT400007130.v4.03 annot-version=v4.03
Sequence

ATGTCTCTTCGACCCAGCAATCGAACTGAAGTTCGCAAGAAATCTTACAAAATTGGGGTT
GATGCAGATGAAGCTCGTAGAAGGAGAGAGGACAATTTGGTTGAGATCAGGAAGAATAAG
CGAGAAGACAATCTTCTCAAGAAACGCAGAGAGGGTCTTCTTCTTCACTCTCAGCAGTTA
CCCGATGCCACTCAAACCCCTGATGCTATTGAGAAAAGGCTGGAAAGTATTCCTATTATG
GTCCAAGGAGTATGGTCAGAAGATCCTGCGGCGCAAATCGAAGCAACTACACATTTCAGG
AAGCTCTTATCAATTGAGCGCAGCCCTCCAATTGATGAGGTAATTAAAGCTGGCGTTATC
CCTCGATTTGTAGAATTCCTCGGACGGCAGGACTTACCTCAGCTTCAATTTGAAGCTGCC
TGGGCGTTGACAAATGTTGCATCTGGAACATCAGAACATACTCGTGTTGTGATTGACCAT
GGAGCTGTTCCTATGTTTGTACAACTTCTTAGCTCAACCAGTGATGATGTCCGTGAACAG
GCAATCTGGGCTTTGGGCAATGTTGCCGGTGATTCCCCAAGTTGTAGAGATCTTGTTCTA
AGTCAGGGTGCGCTGATGCCATTGCTAGCTCAGTTGAATGAACACTCAAAGCTTTCAATG
CTAAGAAATGCAACATGGACTCTCTCCAACTTTTGTCGAGGCAAACCGCCAACACCATTT
GAGGCAGTCAAGCCTGCATTACCGGTTCTTCAACAACTTATCCACATGAATGATGAAGAA
GTTTTGACAGATGCTTGCTGGGCTCTTTCTTATTTATCTGATGGACCAAATGATAAGATT
CAGGCTGTAATTGATGCAGGTGTCTGTCCACGACTAGTGGAGCTTCTTCTTCATCCATCG
CCTACTGTTCTCATACCTGCTCTCCGAACTGCGGGAAATATTGTTACTGGTGATGATGCT
CAAACACAGTTTGTGATTGACAACCAAGTCTTACCATGTCTGTATCAATTGTTAACTCAA
AATCACAAGAAAAGCATCAAGAAGGAAGCATGTTGGACAATCTCTAATATCACTGCTGGA
AACAGAGCCCAAATACAGGCTGTTATTGAGGCGAATATTATTCTTCCCATGGTACACCTA
TTGCAAAATGCAGAATTTGACATTAAGAAGGAGGCAGCATGGGCTATCTCTAATGCTACC
TCTGGAGGATCTAATGACCAGATTAGGTTCTTGGCTAGTCAAGGTTGCATTAAGCCACTA
TGTGATCTCCTAATTTGTCCAGATCCCAGAATCGTTACAGTATGCTTGGAGGGGCTCGAG
AATATACTGAAGGTGGGCGAGGTGGACAAAGAAGCTGGGGCGAATGGTGGAATCAATTTG
TATGCACAAACTATCGATGAATGTGATGGATTGGACAAGATTGAGAATCTCCAAACTCAC
GATAACAATGAGTTATATGAGAAGGCTGTAAAGATCTTGGAGAAATACTGGGCTGAAGAA
GATGAAGAGCAAAATCTCCCTGATGGTGCTGATGGGAATCAGCAAGGTTTCCAATTCGGA
AACAACCAGCCTAATGTTCCTGCTGGAGGATTCAAGTTTGGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400004946
PEP Infomation

pacid=37437576 transcript=PGSC0003DMT400007130 locus=PGSC0003DMG400002759 ID=PGSC0003DMT400007130.v4.03 annot-version=v4.03
Sequence

MSLRPSNRTEVRKKSYKIGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLLHSQQL
PDATQTPDAIEKRLESIPIMVQGVWSEDPAAQIEATTHFRKLLSIERSPPIDEVIKAGVI
PRFVEFLGRQDLPQLQFEAAWALTNVASGTSEHTRVVIDHGAVPMFVQLLSSTSDDVREQ
AIWALGNVAGDSPSCRDLVLSQGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPF
EAVKPALPVLQQLIHMNDEEVLTDACWALSYLSDGPNDKIQAVIDAGVCPRLVELLLHPS
PTVLIPALRTAGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKKEACWTISNITAG
NRAQIQAVIEANIILPMVHLLQNAEFDIKKEAAWAISNATSGGSNDQIRFLASQGCIKPL
CDLLICPDPRIVTVCLEGLENILKVGEVDKEAGANGGINLYAQTIDECDGLDKIENLQTH
DNNELYEKAVKILEKYWAEEDEEQNLPDGADGNQQGFQFGNNQPNVPAGGFKFG*

Transcript Sequence

Transcript ID

PGSC0003DMT400007130
Transcript Infomation

pacid=37437576 locus=PGSC0003DMG400002759 ID=PGSC0003DMT400007130.v4.03 annot-version=v4.03
Sequence

ATGTCTCTTCGACCCAGCAATCGAACTGAAGTTCGCAAGAAATCTTACAAAATTGGGGTT
GATGCAGATGAAGCTCGTAGAAGGAGAGAGGACAATTTGGTTGAGATCAGGAAGAATAAG
CGAGAAGACAATCTTCTCAAGAAACGCAGAGAGGGTCTTCTTCTTCACTCTCAGCAGTTA
CCCGATGCCACTCAAACCCCTGATGCTATTGAGAAAAGGCTGGAAAGTATTCCTATTATG
GTCCAAGGAGTATGGTCAGAAGATCCTGCGGCGCAAATCGAAGCAACTACACATTTCAGG
AAGCTCTTATCAATTGAGCGCAGCCCTCCAATTGATGAGGTAATTAAAGCTGGCGTTATC
CCTCGATTTGTAGAATTCCTCGGACGGCAGGACTTACCTCAGCTTCAATTTGAAGCTGCC
TGGGCGTTGACAAATGTTGCATCTGGAACATCAGAACATACTCGTGTTGTGATTGACCAT
GGAGCTGTTCCTATGTTTGTACAACTTCTTAGCTCAACCAGTGATGATGTCCGTGAACAG
GCAATCTGGGCTTTGGGCAATGTTGCCGGTGATTCCCCAAGTTGTAGAGATCTTGTTCTA
AGTCAGGGTGCGCTGATGCCATTGCTAGCTCAGTTGAATGAACACTCAAAGCTTTCAATG
CTAAGAAATGCAACATGGACTCTCTCCAACTTTTGTCGAGGCAAACCGCCAACACCATTT
GAGGCAGTCAAGCCTGCATTACCGGTTCTTCAACAACTTATCCACATGAATGATGAAGAA
GTTTTGACAGATGCTTGCTGGGCTCTTTCTTATTTATCTGATGGACCAAATGATAAGATT
CAGGCTGTAATTGATGCAGGTGTCTGTCCACGACTAGTGGAGCTTCTTCTTCATCCATCG
CCTACTGTTCTCATACCTGCTCTCCGAACTGCGGGAAATATTGTTACTGGTGATGATGCT
CAAACACAGTTTGTGATTGACAACCAAGTCTTACCATGTCTGTATCAATTGTTAACTCAA
AATCACAAGAAAAGCATCAAGAAGGAAGCATGTTGGACAATCTCTAATATCACTGCTGGA
AACAGAGCCCAAATACAGGCTGTTATTGAGGCGAATATTATTCTTCCCATGGTACACCTA
TTGCAAAATGCAGAATTTGACATTAAGAAGGAGGCAGCATGGGCTATCTCTAATGCTACC
TCTGGAGGATCTAATGACCAGATTAGGTTCTTGGCTAGTCAAGGTTGCATTAAGCCACTA
TGTGATCTCCTAATTTGTCCAGATCCCAGAATCGTTACAGTATGCTTGGAGGGGCTCGAG
AATATACTGAAGGTGGGCGAGGTGGACAAAGAAGCTGGGGCGAATGGTGGAATCAATTTG
TATGCACAAACTATCGATGAATGTGATGGATTGGACAAGATTGAGAATCTCCAAACTCAC
GATAACAATGAGTTATATGAGAAGGCTGTAAAGATCTTGGAGAAATACTGGGCTGAAGAA
GATGAAGAGCAAAATCTCCCTGATGGTGCTGATGGGAATCAGCAAGGTTTCCAATTCGGA
AACAACCAGCCTAATGTTCCTGCTGGAGGATTCAAGTTTGGCTAG