Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007105
CDS Infomation

pacid=37437244 polypeptide=PGSC0003DMP400004928 locus=PGSC0003DMG400002750 ID=PGSC0003DMT400007105.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGCTTTCACCAGTATCGCTATCAACGTCTTCATCGGAGACCTCAATCGTCCCG
TCAATTTATCGGAAACTTTCTGTATTACCTACCGTTGTTGTCCGTTCTTTTCCGAGCCAT
ACGATAAAGAAATCCAGAACACAAATAGACTATGTGGCATATGTTCAACCTCATGATGTC
AACAGACCGCGATCTTCCATAAGGTCGACCTCTTTTAATGTTGAAGGAACTGGAAGCACT
ACTTCACTTGATGAAGAAGTTATAATTGACACTTCTTTGACGGAGGCTTCCATAAAGTTG
CCTTTGCCTTTGTTTGAGACTCAATCATCCAGTAGTGGTGCACCAACTGATGATTCAGCC
TCTCTTAGCATTGCTGTTATTGGGGCCACTGGTGTACTAGCCAGAAAGAAAATCTTTCCA
GCATTATTTGCTTTGTATTACAGTGGTCAACTTCCAGAGAAAATTGGTATATTTGGGTAC
TCACGGAAAAAATTAACTGAAGAAGATCTAAGAGCCATAATAGCACCAACTTTAAGTTGC
CGCATTGATCACCAAGAAAACTGTGAAGAAAAAATGGATGCATTTCTCAAAAGGATATTC
TATCTTTATGGAGGGTATGACAACCAAGAAGGAATGTCAAAGCTCAATACTCTCATGGAA
GAAGTTGAGGGAAAGTTTGGAGCAAACAGAATATTTTACCTTTCTGTGCCTCAAGAAGCA
CTTATCGACGTAGCATCCTCTCTTTCTGAAAAGGCCCAAACTCAGAGGGGTTGGAATCGT
GTAATAATTGAAAAACCCTTTGGACTGGGTTCGTTTTCTTCTCATCAGTTGACTACCTCC
CTTCTCTCAAACTTTGAGGAAAAGCAATTATACAGGATAGATCATCTTTTGGGAAGGAAC
ACAATTGAGAATCTTGCGGTTCTAAGGTTCTCTAATCTAGTATTTATGCCATTATGGAAT
CGAAGTTACATACACAACATACAGGTCACTTTTTCTGAAGAGTTAGGCATGCAGACCTCA
GCAAGATATCCTAAAGGCTATGGGATTTTAGGAGATGTTGTACACAGCCACATCTTCCAG
ACAGTGGCCTTGCTTGCTATGGAGCCGCCTGTCACCCTTGATGGTGAAGATGTTCGTCAT
GAGAAAGTTAAGGTTTTGAAATCAATTAGAAAATTGGGATCATCTGATGTAATTCTTGGG
CATAGCGAAGCTGATTCTGGAAGTAACTTCAAGGATATGGAAAACCTAATGCCCACATAT
TTTGGTGCTGTTTTACACATTGATAATGCACGGTGGGACGGTGTGCCTTTTCTTATTAAG
GCTGGCAGGGGGCTCAAAAAGAACAGAGTTGAAATTCGTATACAATTTCGTCGTGTTCCT
GGAAACATTTATCATAAAGACGGAGGAGGGCATATGCAAGATCTTGTCACTAATGAGCTG
ATTCTGCGTGATGTGCCTGATGAGGCCATACTCATCAGAATTAATAATAAAATTCCAGGA
TTAGGCATGAACTTGGAGGCTTCGGAATTGAACTTGCTTTATAAAGACAAGTACAATGTT
GATGTAACGGACTCGTATGAACAACTTCTTCATGATGTAATAGATGGAGATAACCATCTA
TTCATGAGAAGCGATGAGGTTGAAGCTGCATGGAACATTTTATCTCCAGTTTTAAGTGAG
TTGGACAATAATAATGCGACACTTGAGCATTACGAGTTTGGTAGCAAGGGTCCAGATAAA
GCCGGTAATCTCTGGGCTAAACATGGGGTCAAGTGGTTGGATGATTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004928
PEP Infomation

pacid=37437244 transcript=PGSC0003DMT400007105 locus=PGSC0003DMG400002750 ID=PGSC0003DMT400007105.v4.03 annot-version=v4.03
Sequence

MASLSPVSLSTSSSETSIVPSIYRKLSVLPTVVVRSFPSHTIKKSRTQIDYVAYVQPHDV
NRPRSSIRSTSFNVEGTGSTTSLDEEVIIDTSLTEASIKLPLPLFETQSSSSGAPTDDSA
SLSIAVIGATGVLARKKIFPALFALYYSGQLPEKIGIFGYSRKKLTEEDLRAIIAPTLSC
RIDHQENCEEKMDAFLKRIFYLYGGYDNQEGMSKLNTLMEEVEGKFGANRIFYLSVPQEA
LIDVASSLSEKAQTQRGWNRVIIEKPFGLGSFSSHQLTTSLLSNFEEKQLYRIDHLLGRN
TIENLAVLRFSNLVFMPLWNRSYIHNIQVTFSEELGMQTSARYPKGYGILGDVVHSHIFQ
TVALLAMEPPVTLDGEDVRHEKVKVLKSIRKLGSSDVILGHSEADSGSNFKDMENLMPTY
FGAVLHIDNARWDGVPFLIKAGRGLKKNRVEIRIQFRRVPGNIYHKDGGGHMQDLVTNEL
ILRDVPDEAILIRINNKIPGLGMNLEASELNLLYKDKYNVDVTDSYEQLLHDVIDGDNHL
FMRSDEVEAAWNILSPVLSELDNNNATLEHYEFGSKGPDKAGNLWAKHGVKWLDDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400007105
Transcript Infomation

pacid=37437244 locus=PGSC0003DMG400002750 ID=PGSC0003DMT400007105.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGCTTTCACCAGTATCGCTATCAACGTCTTCATCGGAGACCTCAATCGTCCCG
TCAATTTATCGGAAACTTTCTGTATTACCTACCGTTGTTGTCCGTTCTTTTCCGAGCCAT
ACGATAAAGAAATCCAGAACACAAATAGACTATGTGGCATATGTTCAACCTCATGATGTC
AACAGACCGCGATCTTCCATAAGGTCGACCTCTTTTAATGTTGAAGGAACTGGAAGCACT
ACTTCACTTGATGAAGAAGTTATAATTGACACTTCTTTGACGGAGGCTTCCATAAAGTTG
CCTTTGCCTTTGTTTGAGACTCAATCATCCAGTAGTGGTGCACCAACTGATGATTCAGCC
TCTCTTAGCATTGCTGTTATTGGGGCCACTGGTGTACTAGCCAGAAAGAAAATCTTTCCA
GCATTATTTGCTTTGTATTACAGTGGTCAACTTCCAGAGAAAATTGGTATATTTGGGTAC
TCACGGAAAAAATTAACTGAAGAAGATCTAAGAGCCATAATAGCACCAACTTTAAGTTGC
CGCATTGATCACCAAGAAAACTGTGAAGAAAAAATGGATGCATTTCTCAAAAGGATATTC
TATCTTTATGGAGGGTATGACAACCAAGAAGGAATGTCAAAGCTCAATACTCTCATGGAA
GAAGTTGAGGGAAAGTTTGGAGCAAACAGAATATTTTACCTTTCTGTGCCTCAAGAAGCA
CTTATCGACGTAGCATCCTCTCTTTCTGAAAAGGCCCAAACTCAGAGGGGTTGGAATCGT
GTAATAATTGAAAAACCCTTTGGACTGGGTTCGTTTTCTTCTCATCAGTTGACTACCTCC
CTTCTCTCAAACTTTGAGGAAAAGCAATTATACAGGATAGATCATCTTTTGGGAAGGAAC
ACAATTGAGAATCTTGCGGTTCTAAGGTTCTCTAATCTAGTATTTATGCCATTATGGAAT
CGAAGTTACATACACAACATACAGGTCACTTTTTCTGAAGAGTTAGGCATGCAGACCTCA
GCAAGATATCCTAAAGGCTATGGGATTTTAGGAGATGTTGTACACAGCCACATCTTCCAG
ACAGTGGCCTTGCTTGCTATGGAGCCGCCTGTCACCCTTGATGGTGAAGATGTTCGTCAT
GAGAAAGTTAAGGTTTTGAAATCAATTAGAAAATTGGGATCATCTGATGTAATTCTTGGG
CATAGCGAAGCTGATTCTGGAAGTAACTTCAAGGATATGGAAAACCTAATGCCCACATAT
TTTGGTGCTGTTTTACACATTGATAATGCACGGTGGGACGGTGTGCCTTTTCTTATTAAG
GCTGGCAGGGGGCTCAAAAAGAACAGAGTTGAAATTCGTATACAATTTCGTCGTGTTCCT
GGAAACATTTATCATAAAGACGGAGGAGGGCATATGCAAGATCTTGTCACTAATGAGCTG
ATTCTGCGTGATGTGCCTGATGAGGCCATACTCATCAGAATTAATAATAAAATTCCAGGA
TTAGGCATGAACTTGGAGGCTTCGGAATTGAACTTGCTTTATAAAGACAAGTACAATGTT
GATGTAACGGACTCGTATGAACAACTTCTTCATGATGTAATAGATGGAGATAACCATCTA
TTCATGAGAAGCGATGAGGTTGAAGCTGCATGGAACATTTTATCTCCAGTTTTAAGTGAG
TTGGACAATAATAATGCGACACTTGAGCATTACGAGTTTGGTAGCAAGGGTCCAGATAAA
GCCGGTAATCTCTGGGCTAAACATGGGGTCAAGTGGTTGGATGATTTGTGA