Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007059
CDS Infomation

pacid=37458809 polypeptide=PGSC0003DMP400004903 locus=PGSC0003DMG400002727 ID=PGSC0003DMT400007059.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTGTGACGACGATTTCTCTCTCCTCGGTGACGATAACGCCGCCGTCGCCGTT
ACTCCCACCACCACCACCACCGCCAACCCTACTTACCACCACCAACCTTTCTCCTCCGTC
CGGTACAAGCCTGTACAAATCCATCCCCCGCCGATCTCCGCCGGTAGTCCGAAGAACATT
TCCGGCGATGACGAGGACGGTGACGGATACAGCGATAATAACGCGCAGTCGTATCATATC
GGAATGAACCCATACGAGAACGATTCAATTCCGTTTGAGAACGACACCAATGTTAATAGA
TCGAGAGGTAAATTATCAAACGACAAACGAGCCGATCGAGAAGATATCGGTGATAACGGG
ACACCGTATAGTTATAAGAGATCGAAAATCAGCTCATCCTCCGGTAGTGGCAGCGGAGAG
TACCGGAAGGATAGAGAAGAATGGAGTGACACGGCGATAGCGTGTTTATTAGAGGCGTAT
ATGGAGAAATTTGTGCAATTGAATAGAGGGAATTTGAGAGGGAGAGATTGGGAAGAAGTC
GCGGCGATGGTGAGTGAAAGATGCGAGAAGCAATCGAAGAGTGTAGAACAGTGTAAGAAC
AAAGTTGATAATTTGAAGAAGAGGTATAAATTGGAGAGGCATCGGATGAGTAACGGCGGC
TTAACGATTAGTCATTGGCCATGGTTCAAGCAAATGGAACAGATTGTTGGGAATTCGGTA
TCAGTAAAAGCTACATCTGAGGAAGACAAAGCCATTGTTCCAGTGAACAACTCCAGCACT
GGCAGGCAATCGAAAAGATATGGAACAGCGGTGCCTAGTCCCAGCGGACAGATTGTGAAG
GCGAAATCTTCTATGAGTCCAAGGTGGAGAAGGGTAGTTCTTAAAATTAGTGGTGCTGCA
CTAGCTGGAATGACACCAAACACTAATGATGCAAACAACATCGATCCAAAGGTGGCCACG
CTAGTTGCTACAGAAGTCTCAATAGCTTGTCGTCTTGGTATAGAGGTGGCAATAGTTGTT
GGCGGACGCAATTTCTTTTGCGGAGACACATGGGTAACTTCAACTGGATTGGATAGATGT
ACTGCCTATCAAATTGGAATGATGGCAACTCTGATGAACTCCATACTGCTGCAGTCGGCA
TTAGAGAAGGTTGGTGTGCAAACTCGTGTGCAAAGTGCATTTAACATGCCCGAGCTTACT
GAGCCATACAGCAGGCAACGAGCTATGCGGCATCTTGAAAAAGGTAGAGTTGTGATCTTT
GGTGGTATTGGAGCTGGCACAGGGAATCCACTCTTCTCTACGGATACAGTTGCAGCACTC
AGAGCTTCTGAAATTCATGCTGATGCCGTACTCAAGGCTACAAATGTAGATGGTGTCTAT
GTCTGTGACGCCCAAAATAATAATGTTGTTGCTGAGCATATTTCCTTCAGGGAGCTGGTT
TCCGGAGGAGATTCCCCATTGGACCTAATGGCTGTTACATTATGCGAGGAGAATGCAATT
CCTGTTGTTATTTTCAATCTTCATGGGCCTGGAAATATATCAAGAGCGTTATGTGGAGAG
CAGGTGGGTACACTGATCGATCAGACAGGACGTGTTAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400004903
PEP Infomation

pacid=37458809 transcript=PGSC0003DMT400007059 locus=PGSC0003DMG400002727 ID=PGSC0003DMT400007059.v4.03 annot-version=v4.03
Sequence

MASCDDDFSLLGDDNAAVAVTPTTTTTANPTYHHQPFSSVRYKPVQIHPPPISAGSPKNI
SGDDEDGDGYSDNNAQSYHIGMNPYENDSIPFENDTNVNRSRGKLSNDKRADREDIGDNG
TPYSYKRSKISSSSGSGSGEYRKDREEWSDTAIACLLEAYMEKFVQLNRGNLRGRDWEEV
AAMVSERCEKQSKSVEQCKNKVDNLKKRYKLERHRMSNGGLTISHWPWFKQMEQIVGNSV
SVKATSEEDKAIVPVNNSSTGRQSKRYGTAVPSPSGQIVKAKSSMSPRWRRVVLKISGAA
LAGMTPNTNDANNIDPKVATLVATEVSIACRLGIEVAIVVGGRNFFCGDTWVTSTGLDRC
TAYQIGMMATLMNSILLQSALEKVGVQTRVQSAFNMPELTEPYSRQRAMRHLEKGRVVIF
GGIGAGTGNPLFSTDTVAALRASEIHADAVLKATNVDGVYVCDAQNNNVVAEHISFRELV
SGGDSPLDLMAVTLCEENAIPVVIFNLHGPGNISRALCGEQVGTLIDQTGRVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400007059
Transcript Infomation

pacid=37458809 locus=PGSC0003DMG400002727 ID=PGSC0003DMT400007059.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTGTGACGACGATTTCTCTCTCCTCGGTGACGATAACGCCGCCGTCGCCGTT
ACTCCCACCACCACCACCACCGCCAACCCTACTTACCACCACCAACCTTTCTCCTCCGTC
CGGTACAAGCCTGTACAAATCCATCCCCCGCCGATCTCCGCCGGTAGTCCGAAGAACATT
TCCGGCGATGACGAGGACGGTGACGGATACAGCGATAATAACGCGCAGTCGTATCATATC
GGAATGAACCCATACGAGAACGATTCAATTCCGTTTGAGAACGACACCAATGTTAATAGA
TCGAGAGGTAAATTATCAAACGACAAACGAGCCGATCGAGAAGATATCGGTGATAACGGG
ACACCGTATAGTTATAAGAGATCGAAAATCAGCTCATCCTCCGGTAGTGGCAGCGGAGAG
TACCGGAAGGATAGAGAAGAATGGAGTGACACGGCGATAGCGTGTTTATTAGAGGCGTAT
ATGGAGAAATTTGTGCAATTGAATAGAGGGAATTTGAGAGGGAGAGATTGGGAAGAAGTC
GCGGCGATGGTGAGTGAAAGATGCGAGAAGCAATCGAAGAGTGTAGAACAGTGTAAGAAC
AAAGTTGATAATTTGAAGAAGAGGTATAAATTGGAGAGGCATCGGATGAGTAACGGCGGC
TTAACGATTAGTCATTGGCCATGGTTCAAGCAAATGGAACAGATTGTTGGGAATTCGGTA
TCAGTAAAAGCTACATCTGAGGAAGACAAAGCCATTGTTCCAGTGAACAACTCCAGCACT
GGCAGGCAATCGAAAAGATATGGAACAGCGGTGCCTAGTCCCAGCGGACAGATTGTGAAG
GCGAAATCTTCTATGAGTCCAAGGTGGAGAAGGGTAGTTCTTAAAATTAGTGGTGCTGCA
CTAGCTGGAATGACACCAAACACTAATGATGCAAACAACATCGATCCAAAGGTGGCCACG
CTAGTTGCTACAGAAGTCTCAATAGCTTGTCGTCTTGGTATAGAGGTGGCAATAGTTGTT
GGCGGACGCAATTTCTTTTGCGGAGACACATGGGTAACTTCAACTGGATTGGATAGATGT
ACTGCCTATCAAATTGGAATGATGGCAACTCTGATGAACTCCATACTGCTGCAGTCGGCA
TTAGAGAAGGTTGGTGTGCAAACTCGTGTGCAAAGTGCATTTAACATGCCCGAGCTTACT
GAGCCATACAGCAGGCAACGAGCTATGCGGCATCTTGAAAAAGGTAGAGTTGTGATCTTT
GGTGGTATTGGAGCTGGCACAGGGAATCCACTCTTCTCTACGGATACAGTTGCAGCACTC
AGAGCTTCTGAAATTCATGCTGATGCCGTACTCAAGGCTACAAATGTAGATGGTGTCTAT
GTCTGTGACGCCCAAAATAATAATGTTGTTGCTGAGCATATTTCCTTCAGGGAGCTGGTT
TCCGGAGGAGATTCCCCATTGGACCTAATGGCTGTTACATTATGCGAGGAGAATGCAATT
CCTGTTGTTATTTTCAATCTTCATGGGCCTGGAAATATATCAAGAGCGTTATGTGGAGAG
CAGGTGGGTACACTGATCGATCAGACAGGACGTGTTAGCTAG