Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007058
CDS Infomation

pacid=37456410 polypeptide=PGSC0003DMP400004902 locus=PGSC0003DMG400002726 ID=PGSC0003DMT400007058.v4.03 annot-version=v4.03
Sequence

ATGGAATGGGAGTGGAACTATGTTGTTTGGTCTATAATCATCATAGTACCAACAACTCTA
ATCATAGTATTTTCCAAAACAAATTCTTCTTCTTACAAGTTACCACCAGGACCACCTGGT
TTCCCAATTTTTGGCAACATGTTTGATCTTGGAACATTACCATATCAAACAATTGCAGAA
TTTAAACAAAAATATGGCCCTGTTGTATGGTTCAAAATTGGCTCTGTCAAGACCATGTCA
ATTTTATCAGCCAACACAGCTACAGAGTTTTTCAAGAACCATGATTTCGCCTTCGCAGAG
CGCAAAATCATTGACACCATGTTGGTTCATGACTACAACCTTGGGTCCTTAGCTATAGCC
CGGTATGGCACGTATTGGCGTGTGCTAAGACGGATATGCACCGTTGAAATGTTCGTGCAC
AAACGGATCAATGAAACAGTGGATATCAGGAGGAAATGTGTTGATGATATGATTCATTGG
ATTGAGAAAGAAGTGAATTCAGTGGAAGTCAAGGGAAGTGGGATTGAGGTAACGCGATTT
GTGTTCCTCTCAACGTTTAATATGTTAGGGAATTTGATGTTTTCGCGTGATTTAGTCCAT
CCAGGATCAAAGAAGGCTTCTGAGTTCTTCAATGCTATGATGAGGATCATGATTTTGTCA
GGCACTCCAAATATCTCAGACATTTTTCCACGTCTTAGGAGGTTCGATTTACAAGGTTTG
AAGAAGAAGATGCATCGCGAAATGGGAATAGCTCTTGGCATTGCCTCTACGTTTGTCAAG
GAACGGATGAAGGAGCGCGAAGATGGTGAAGAAAAAAAGAACGATTTTTTAGATGTGTTG
CTTGAATTTGAGGGTAGTGGGAAAGATGAACCAGCTAAGTTATCAGAACATCAGATCACC
ATATTCATATTGGAGATGTTTTTAGCCGGATCAGAGACGACTAGCAGCAGTGTGGAATGG
ACGTTGACAGAGCTCCTACGCCACCCTGAAGCAATGGCAAGAGTAAAAGCAGAGATATTT
CAAATTGTAGGACAAAACAAGAAGTTTGAAGAAAGTGACATTGACAATCTGCCCTATATG
CAAGCTGTGGTTAAAGAAGTGCTAAGATTACATCCTCCACTTCCTTTCTTAGTGCCAAGA
AGAGCGATGCACGACACTAACTTCATGGGGTATGACATACCAGAAGACACTCAAGTGTTT
GTGAACGTTTGGGCAATTGGAAGAGATCCTGAATACTGGGACGACCCTTTGGATTTCAAG
CCTGAGAGGTTCCTTAACTCGAAGACTGACTTCAAAGGACAGTGTTACGAGTTTTTACCA
TTTGGTGCTGGCAGGAGGATGTGTGTAGGCCTTCCTTTAGGTAATCGAATGTTACACTTT
GTTTTAGGCTCGTTGCTTCATGAATTCGATTGGGAGCTTCCTAGTAATGTCACTCCTAAA
TCAATGGACATGAAAGAGAGGATGGGAATGACAGTGAGAAAATTCAATCCTTTGACAGCA
GTACCAACAAAAACATCTGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004902
PEP Infomation

pacid=37456410 transcript=PGSC0003DMT400007058 locus=PGSC0003DMG400002726 ID=PGSC0003DMT400007058.v4.03 annot-version=v4.03
Sequence

MEWEWNYVVWSIIIIVPTTLIIVFSKTNSSSYKLPPGPPGFPIFGNMFDLGTLPYQTIAE
FKQKYGPVVWFKIGSVKTMSILSANTATEFFKNHDFAFAERKIIDTMLVHDYNLGSLAIA
RYGTYWRVLRRICTVEMFVHKRINETVDIRRKCVDDMIHWIEKEVNSVEVKGSGIEVTRF
VFLSTFNMLGNLMFSRDLVHPGSKKASEFFNAMMRIMILSGTPNISDIFPRLRRFDLQGL
KKKMHREMGIALGIASTFVKERMKEREDGEEKKNDFLDVLLEFEGSGKDEPAKLSEHQIT
IFILEMFLAGSETTSSSVEWTLTELLRHPEAMARVKAEIFQIVGQNKKFEESDIDNLPYM
QAVVKEVLRLHPPLPFLVPRRAMHDTNFMGYDIPEDTQVFVNVWAIGRDPEYWDDPLDFK
PERFLNSKTDFKGQCYEFLPFGAGRRMCVGLPLGNRMLHFVLGSLLHEFDWELPSNVTPK
SMDMKERMGMTVRKFNPLTAVPTKTSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400007058
Transcript Infomation

pacid=37456410 locus=PGSC0003DMG400002726 ID=PGSC0003DMT400007058.v4.03 annot-version=v4.03
Sequence

ATGGAATGGGAGTGGAACTATGTTGTTTGGTCTATAATCATCATAGTACCAACAACTCTA
ATCATAGTATTTTCCAAAACAAATTCTTCTTCTTACAAGTTACCACCAGGACCACCTGGT
TTCCCAATTTTTGGCAACATGTTTGATCTTGGAACATTACCATATCAAACAATTGCAGAA
TTTAAACAAAAATATGGCCCTGTTGTATGGTTCAAAATTGGCTCTGTCAAGACCATGTCA
ATTTTATCAGCCAACACAGCTACAGAGTTTTTCAAGAACCATGATTTCGCCTTCGCAGAG
CGCAAAATCATTGACACCATGTTGGTTCATGACTACAACCTTGGGTCCTTAGCTATAGCC
CGGTATGGCACGTATTGGCGTGTGCTAAGACGGATATGCACCGTTGAAATGTTCGTGCAC
AAACGGATCAATGAAACAGTGGATATCAGGAGGAAATGTGTTGATGATATGATTCATTGG
ATTGAGAAAGAAGTGAATTCAGTGGAAGTCAAGGGAAGTGGGATTGAGGTAACGCGATTT
GTGTTCCTCTCAACGTTTAATATGTTAGGGAATTTGATGTTTTCGCGTGATTTAGTCCAT
CCAGGATCAAAGAAGGCTTCTGAGTTCTTCAATGCTATGATGAGGATCATGATTTTGTCA
GGCACTCCAAATATCTCAGACATTTTTCCACGTCTTAGGAGGTTCGATTTACAAGGTTTG
AAGAAGAAGATGCATCGCGAAATGGGAATAGCTCTTGGCATTGCCTCTACGTTTGTCAAG
GAACGGATGAAGGAGCGCGAAGATGGTGAAGAAAAAAAGAACGATTTTTTAGATGTGTTG
CTTGAATTTGAGGGTAGTGGGAAAGATGAACCAGCTAAGTTATCAGAACATCAGATCACC
ATATTCATATTGGAGATGTTTTTAGCCGGATCAGAGACGACTAGCAGCAGTGTGGAATGG
ACGTTGACAGAGCTCCTACGCCACCCTGAAGCAATGGCAAGAGTAAAAGCAGAGATATTT
CAAATTGTAGGACAAAACAAGAAGTTTGAAGAAAGTGACATTGACAATCTGCCCTATATG
CAAGCTGTGGTTAAAGAAGTGCTAAGATTACATCCTCCACTTCCTTTCTTAGTGCCAAGA
AGAGCGATGCACGACACTAACTTCATGGGGTATGACATACCAGAAGACACTCAAGTGTTT
GTGAACGTTTGGGCAATTGGAAGAGATCCTGAATACTGGGACGACCCTTTGGATTTCAAG
CCTGAGAGGTTCCTTAACTCGAAGACTGACTTCAAAGGACAGTGTTACGAGTTTTTACCA
TTTGGTGCTGGCAGGAGGATGTGTGTAGGCCTTCCTTTAGGTAATCGAATGTTACACTTT
GTTTTAGGCTCGTTGCTTCATGAATTCGATTGGGAGCTTCCTAGTAATGTCACTCCTAAA
TCAATGGACATGAAAGAGAGGATGGGAATGACAGTGAGAAAATTCAATCCTTTGACAGCA
GTACCAACAAAAACATCTGGTTAA