Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007020
CDS Infomation

pacid=37454640 polypeptide=PGSC0003DMP400004867 locus=PGSC0003DMG400002713 ID=PGSC0003DMT400007020.v4.03 annot-version=v4.03
Sequence

ATGGAGGACAATAACCCACACCCCACAAAACCCAGGGTGGTCTGTTGTATAGGTGATATC
CATGGCTACATAACAAAACTCCAAAATCTATGGTCAAATCTTGAATCTTGCATTAACCCA
TCTGATTTTGAGACTGCCCTTGTCATTTTCTTGGGTGATTACTGTGATAGAGGTCCAGAA
ACTAGTAAAGTTCTAGACTTTCTCATTTCTTTGCCATCAAAATACCCAAAACAATCCCAT
GTTTTCCTTTGTGGGAATCATGATTTTGCATTTGGGGCATTCTTGGGTGTACTTCCAAGT
CCACCTGATGGGTCTGAATTTTGTGAGACATGGAAAGAGTATGAGATGAATGAGGAAAGA
GAAGGGTGGTATAAAGGTGAAAGCTTTGAGAATATGCATTTGCAAGGGAGGAGGTGGGCT
GGGAATCATACTGTTAAGTTTAATGCTGTAAAGGGTATTGATTATAAAGGATCTATTTAT
GATGCTGCTCCTACTTTTGAGTCTTATGGTGTTCCTCATGGTTCTGCTGATCTTATGAAG
GTAGTTACTGATGAGCACAAGAAATTCCTTGCCAATTTGGTTTGGATCCACGAAGAGGAC
GATGTTACCATAAAAACTGAGGAAGGAATTAAAAGGTGCAAACTAATTGCTGTTCATGCT
GGCTTGGAGAAAAACAAACCTGTTGAACAGCAGATTAAAACCTTGAAAGCAAAGGACACG
AGGATTCCTAAAGTTGCCGCCCTTAGTGGAAGGAAGGACGTATGGGAAATCCCTCAGGAA
CTGACTAAAACTCCAACGATTATCGTAAGTGGCCACCATGCAAAATTACATATTGAAGGC
CTCAGACTGGTAATAGATCAAGGTGGTGGATTTGAAGATCAGCCAGTGGCTGCAATAGTG
CTTCCTTCACTGGAAATTGTAAGGGATACTGACCATTTGGTGAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400004867
PEP Infomation

pacid=37454640 transcript=PGSC0003DMT400007020 locus=PGSC0003DMG400002713 ID=PGSC0003DMT400007020.v4.03 annot-version=v4.03
Sequence

MEDNNPHPTKPRVVCCIGDIHGYITKLQNLWSNLESCINPSDFETALVIFLGDYCDRGPE
TSKVLDFLISLPSKYPKQSHVFLCGNHDFAFGAFLGVLPSPPDGSEFCETWKEYEMNEER
EGWYKGESFENMHLQGRRWAGNHTVKFNAVKGIDYKGSIYDAAPTFESYGVPHGSADLMK
VVTDEHKKFLANLVWIHEEDDVTIKTEEGIKRCKLIAVHAGLEKNKPVEQQIKTLKAKDT
RIPKVAALSGRKDVWEIPQELTKTPTIIVSGHHAKLHIEGLRLVIDQGGGFEDQPVAAIV
LPSLEIVRDTDHLVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400007020
Transcript Infomation

pacid=37454640 locus=PGSC0003DMG400002713 ID=PGSC0003DMT400007020.v4.03 annot-version=v4.03
Sequence

ATGGAGGACAATAACCCACACCCCACAAAACCCAGGGTGGTCTGTTGTATAGGTGATATC
CATGGCTACATAACAAAACTCCAAAATCTATGGTCAAATCTTGAATCTTGCATTAACCCA
TCTGATTTTGAGACTGCCCTTGTCATTTTCTTGGGTGATTACTGTGATAGAGGTCCAGAA
ACTAGTAAAGTTCTAGACTTTCTCATTTCTTTGCCATCAAAATACCCAAAACAATCCCAT
GTTTTCCTTTGTGGGAATCATGATTTTGCATTTGGGGCATTCTTGGGTGTACTTCCAAGT
CCACCTGATGGGTCTGAATTTTGTGAGACATGGAAAGAGTATGAGATGAATGAGGAAAGA
GAAGGGTGGTATAAAGGTGAAAGCTTTGAGAATATGCATTTGCAAGGGAGGAGGTGGGCT
GGGAATCATACTGTTAAGTTTAATGCTGTAAAGGGTATTGATTATAAAGGATCTATTTAT
GATGCTGCTCCTACTTTTGAGTCTTATGGTGTTCCTCATGGTTCTGCTGATCTTATGAAG
GTAGTTACTGATGAGCACAAGAAATTCCTTGCCAATTTGGTTTGGATCCACGAAGAGGAC
GATGTTACCATAAAAACTGAGGAAGGAATTAAAAGGTGCAAACTAATTGCTGTTCATGCT
GGCTTGGAGAAAAACAAACCTGTTGAACAGCAGATTAAAACCTTGAAAGCAAAGGACACG
AGGATTCCTAAAGTTGCCGCCCTTAGTGGAAGGAAGGACGTATGGGAAATCCCTCAGGAA
CTGACTAAAACTCCAACGATTATCGTAAGTGGCCACCATGCAAAATTACATATTGAAGGC
CTCAGACTGGTAATAGATCAAGGTGGTGGATTTGAAGATCAGCCAGTGGCTGCAATAGTG
CTTCCTTCACTGGAAATTGTAAGGGATACTGACCATTTGGTGAAGTAG