Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400007016
CDS Infomation

pacid=37456371 polypeptide=PGSC0003DMP400004864 locus=PGSC0003DMG400002710 ID=PGSC0003DMT400007016.v4.03 annot-version=v4.03
Sequence

ATGGAAGATCAGTATGGAATGGCAGATCTAAGACAATACATGAATGGTGGGCGTTCGATT
TTCGGTTCGATCCAACAAGTACCACCAGAGCTGTTACCTGCTACTTCTCACCAGCAACAA
CAACAACACAGGAATCTTGGGCCGGGCCATCACCAGTATGAGATGGTGATGGGACTGGCC
CAAGTTCCTTCGTCTTCATCTGGTCACGGGCTTACTACTCCACATCACCACCACCAACAT
GAGTTCCTTACGGACTCGAGTACTCCTGTAGCTGTAGCTGCTACAGCTATAGGAACTACT
ACTACGAGTGCCGGATTTAGTGGAATGGATCAGATGGAGATTGGTGGTGGTGGTGGTGGA
GACGGAAGTGGACGGTGGCCGAGACAAGAGACACTTACACTACTTGAAATCAGATCAAGA
TTGGATTCAAAGTTCAAAGAAGCTAATCAAAAAGGACCCTTATGGGATGAAGTTTCAAGG
ATTATGTCTGAGGAACATGGATACCAAAGGACTGGAAAGAAATGTAGAGAGAAATTTGAG
AACTTGTACAAGTACTACAAGAAAACTAAAGAGGGTAAAGCTGGAAGACAAGATGGAAAA
CACTATCGATTTTTTCGACAACTTGAAGCTTTATATGGTGAAACAAGCAATAATATTTCA
TCTACCTCAACGGAAGTTCTTCATCAGGGAAGTCATTTTCCTTATAATTCCGTTAATAAC
AACATGAATCAAGATCCTCATAATTTTCACCACGTCCATCAAGGTCCTAAGATATCCGAT
AGCATAAGTCTATCTAATTCATCTGAATTCAATACGACTTCCTCAGATGATAGTGATCAA
GAGAAGAAGAAGAAGAGGAGGGGGAAGAGGAGTTTAAAGGCGAAGATAAAAGATTTCATT
GATGGACAAATGAGAAAGTTGATGGAGAAACAAGAAGAATGGTTGGAGAAAATGATGAAA
ATGATTGAACATAAAGAACAAGAGAGGATATTGAGAGAAGAAGAATGGAGGAATCAAGAG
ACGATTCGTATGGAAAGGGAACATAAATTTTGGGCTAATGAGAGGGCATGGATAGAAACG
CGCGATGCTGCTTTGATGGAGGCTGTGAATAAGCTAAGTGGTAAAGATTTGAAGAGTACT
CTTGATGAAGAAATGGTTGATAATAGAAGAGGAGATGTGAGAGACAGTCTAAAAGATGAT
GATGTTGACCAGCACTGGCCTGATAGTGAAATAACTAGGTTAATACAACTTAGGACTAGC
ATGGAATCAAGATATCAACAATTGGGAATTTCATCATCAATAGATGATCATGATAATGAT
CATGATCATGTATTATGGGAAGAGATTAGTGAAAAAATGGCTATTTTGGGATATGAAAAA
AGTGCTACAATGTGCAAGAAAAGATGGGGTAGCATCAATAGTTACCTAATGAAGTGCAAC
AAGAAAAGAAAAGAACAAAATTCAACAAGTTTGTTATGTTACAATGGTAATGTACAAATC
AACAATCAATATTATGAAGCTGATGGATCATCATGTTTTAGGTACTTAATGGGAGATCAT
CATCAAAACTTATGGGAAAATTATGAATTGAAATTAAGCAAAGGTGGTGATGGTGGTGGA
AATAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004864
PEP Infomation

pacid=37456371 transcript=PGSC0003DMT400007016 locus=PGSC0003DMG400002710 ID=PGSC0003DMT400007016.v4.03 annot-version=v4.03
Sequence

MEDQYGMADLRQYMNGGRSIFGSIQQVPPELLPATSHQQQQQHRNLGPGHHQYEMVMGLA
QVPSSSSGHGLTTPHHHHQHEFLTDSSTPVAVAATAIGTTTTSAGFSGMDQMEIGGGGGG
DGSGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMSEEHGYQRTGKKCREKFE
NLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGETSNNISSTSTEVLHQGSHFPYNSVNN
NMNQDPHNFHHVHQGPKISDSISLSNSSEFNTTSSDDSDQEKKKKRRGKRSLKAKIKDFI
DGQMRKLMEKQEEWLEKMMKMIEHKEQERILREEEWRNQETIRMEREHKFWANERAWIET
RDAALMEAVNKLSGKDLKSTLDEEMVDNRRGDVRDSLKDDDVDQHWPDSEITRLIQLRTS
MESRYQQLGISSSIDDHDNDHDHVLWEEISEKMAILGYEKSATMCKKRWGSINSYLMKCN
KKRKEQNSTSLLCYNGNVQINNQYYEADGSSCFRYLMGDHHQNLWENYELKLSKGGDGGG
NN*

Transcript Sequence

Transcript ID

PGSC0003DMT400007016
Transcript Infomation

pacid=37456371 locus=PGSC0003DMG400002710 ID=PGSC0003DMT400007016.v4.03 annot-version=v4.03
Sequence

ATGGAAGATCAGTATGGAATGGCAGATCTAAGACAATACATGAATGGTGGGCGTTCGATT
TTCGGTTCGATCCAACAAGTACCACCAGAGCTGTTACCTGCTACTTCTCACCAGCAACAA
CAACAACACAGGAATCTTGGGCCGGGCCATCACCAGTATGAGATGGTGATGGGACTGGCC
CAAGTTCCTTCGTCTTCATCTGGTCACGGGCTTACTACTCCACATCACCACCACCAACAT
GAGTTCCTTACGGACTCGAGTACTCCTGTAGCTGTAGCTGCTACAGCTATAGGAACTACT
ACTACGAGTGCCGGATTTAGTGGAATGGATCAGATGGAGATTGGTGGTGGTGGTGGTGGA
GACGGAAGTGGACGGTGGCCGAGACAAGAGACACTTACACTACTTGAAATCAGATCAAGA
TTGGATTCAAAGTTCAAAGAAGCTAATCAAAAAGGACCCTTATGGGATGAAGTTTCAAGG
ATTATGTCTGAGGAACATGGATACCAAAGGACTGGAAAGAAATGTAGAGAGAAATTTGAG
AACTTGTACAAGTACTACAAGAAAACTAAAGAGGGTAAAGCTGGAAGACAAGATGGAAAA
CACTATCGATTTTTTCGACAACTTGAAGCTTTATATGGTGAAACAAGCAATAATATTTCA
TCTACCTCAACGGAAGTTCTTCATCAGGGAAGTCATTTTCCTTATAATTCCGTTAATAAC
AACATGAATCAAGATCCTCATAATTTTCACCACGTCCATCAAGGTCCTAAGATATCCGAT
AGCATAAGTCTATCTAATTCATCTGAATTCAATACGACTTCCTCAGATGATAGTGATCAA
GAGAAGAAGAAGAAGAGGAGGGGGAAGAGGAGTTTAAAGGCGAAGATAAAAGATTTCATT
GATGGACAAATGAGAAAGTTGATGGAGAAACAAGAAGAATGGTTGGAGAAAATGATGAAA
ATGATTGAACATAAAGAACAAGAGAGGATATTGAGAGAAGAAGAATGGAGGAATCAAGAG
ACGATTCGTATGGAAAGGGAACATAAATTTTGGGCTAATGAGAGGGCATGGATAGAAACG
CGCGATGCTGCTTTGATGGAGGCTGTGAATAAGCTAAGTGGTAAAGATTTGAAGAGTACT
CTTGATGAAGAAATGGTTGATAATAGAAGAGGAGATGTGAGAGACAGTCTAAAAGATGAT
GATGTTGACCAGCACTGGCCTGATAGTGAAATAACTAGGTTAATACAACTTAGGACTAGC
ATGGAATCAAGATATCAACAATTGGGAATTTCATCATCAATAGATGATCATGATAATGAT
CATGATCATGTATTATGGGAAGAGATTAGTGAAAAAATGGCTATTTTGGGATATGAAAAA
AGTGCTACAATGTGCAAGAAAAGATGGGGTAGCATCAATAGTTACCTAATGAAGTGCAAC
AAGAAAAGAAAAGAACAAAATTCAACAAGTTTGTTATGTTACAATGGTAATGTACAAATC
AACAATCAATATTATGAAGCTGATGGATCATCATGTTTTAGGTACTTAATGGGAGATCAT
CATCAAAACTTATGGGAAAATTATGAATTGAAATTAAGCAAAGGTGGTGATGGTGGTGGA
AATAATTGA