Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006999
CDS Infomation

pacid=37456833 polypeptide=PGSC0003DMP400004853 locus=PGSC0003DMG400002703 ID=PGSC0003DMT400006999.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGAAATCATTCAAATATGTGATCGTCGGTGGCGGTGTTTCTGCTGGGTATGCT
GCTAGAGAATTTGCAAAACAGGGAGTTAATCCTGGGGAACTGGCTATTATTTCCAAAGAG
GCAGAGCTGCTAGACTCCCAGGGTTTCATGTGTGTGTTGGAAGTGGAGGAGAGAGACAGC
TTCCTGAGTGGTATCTCGTTGATCCTGAGTACTGAAATAGTGAAAGCAGATCTTGCTTCA
AAGACTCTTGTTAGTGCAGCTGGGGAATCTTTTAAATATCAAACACTTGTTATTGCAACA
GGATCCACCGTTTTGAAGTTGTCAGATTTTGGTGTACAAGGTGCTGATTCCAAGAACATC
TTTTACTTGAGAGAAATTGATGATGCTGATCAACTTGTGGAAGCATTAAAAGCTAAGAAA
AATGGTAAAGCTGTTATTGTTGGGGGAGGGTACATCGGTCTCGAGCTTAGTGCTGTACTG
AGACTGAACAACATTGAAGTCAATATGGTTTACCCAGAACCATGGTGCATGCCTCGGCTT
TTCACAGAGGGCATAGCTGCATTCTATGAAGGTTATTATCAAAACAAGGGAGTCAATATT
ATCAAGGGTACAGTGGCTGTTGGGTTTGATACCCATCCAAATGGAGAGGTGAAGGAAGTC
AAACTTAAAGATGGCAGAGTTTTGGAAGCTGACATAGTAGTCGTAGGAGTTGGAGCAAAA
CCACTCACGACTCTATTCAAAGGGCAAGTTGAAGAGGAGAAGGGTGGAATTAAGACAGAT
GCATTCTTCAAAACAAGCGTACCTGATGTATATGCTGTGGGTGATGTTGCCACTTTTCCT
TTGAAAATGTACAATGAGATTAGAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCT
GAGCAGGCTGTCAAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGAC
TACCTTCCATACTTCTATTCCCGTGCATTCGATTTGTCTTGGCAATTCTACGGTGATAAT
GTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGA
CAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAA
GAGAACAAGGCAATTGCTAAAGTCGCAAAAGTCCAACCCCCTGCTACCTTGGATCAATTG
GCACAGGAGGGCATCAGCTTTGCCTCAAAGATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004853
PEP Infomation

pacid=37456833 transcript=PGSC0003DMT400006999 locus=PGSC0003DMG400002703 ID=PGSC0003DMT400006999.v4.03 annot-version=v4.03
Sequence

MAEKSFKYVIVGGGVSAGYAAREFAKQGVNPGELAIISKEAELLDSQGFMCVLEVEERDS
FLSGISLILSTEIVKADLASKTLVSAAGESFKYQTLVIATGSTVLKLSDFGVQGADSKNI
FYLREIDDADQLVEALKAKKNGKAVIVGGGYIGLELSAVLRLNNIEVNMVYPEPWCMPRL
FTEGIAAFYEGYYQNKGVNIIKGTVAVGFDTHPNGEVKEVKLKDGRVLEADIVVVGVGAK
PLTTLFKGQVEEEKGGIKTDAFFKTSVPDVYAVGDVATFPLKMYNEIRRVEHVDHSRKSA
EQAVKAIFASEQGKSVDEYDYLPYFYSRAFDLSWQFYGDNVGETVLFGDADPNSATHKFG
QYWIKDGKIVGAFLESGSPEENKAIAKVAKVQPPATLDQLAQEGISFASKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400006999
Transcript Infomation

pacid=37456833 locus=PGSC0003DMG400002703 ID=PGSC0003DMT400006999.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGAAATCATTCAAATATGTGATCGTCGGTGGCGGTGTTTCTGCTGGGTATGCT
GCTAGAGAATTTGCAAAACAGGGAGTTAATCCTGGGGAACTGGCTATTATTTCCAAAGAG
GCAGAGCTGCTAGACTCCCAGGGTTTCATGTGTGTGTTGGAAGTGGAGGAGAGAGACAGC
TTCCTGAGTGGTATCTCGTTGATCCTGAGTACTGAAATAGTGAAAGCAGATCTTGCTTCA
AAGACTCTTGTTAGTGCAGCTGGGGAATCTTTTAAATATCAAACACTTGTTATTGCAACA
GGATCCACCGTTTTGAAGTTGTCAGATTTTGGTGTACAAGGTGCTGATTCCAAGAACATC
TTTTACTTGAGAGAAATTGATGATGCTGATCAACTTGTGGAAGCATTAAAAGCTAAGAAA
AATGGTAAAGCTGTTATTGTTGGGGGAGGGTACATCGGTCTCGAGCTTAGTGCTGTACTG
AGACTGAACAACATTGAAGTCAATATGGTTTACCCAGAACCATGGTGCATGCCTCGGCTT
TTCACAGAGGGCATAGCTGCATTCTATGAAGGTTATTATCAAAACAAGGGAGTCAATATT
ATCAAGGGTACAGTGGCTGTTGGGTTTGATACCCATCCAAATGGAGAGGTGAAGGAAGTC
AAACTTAAAGATGGCAGAGTTTTGGAAGCTGACATAGTAGTCGTAGGAGTTGGAGCAAAA
CCACTCACGACTCTATTCAAAGGGCAAGTTGAAGAGGAGAAGGGTGGAATTAAGACAGAT
GCATTCTTCAAAACAAGCGTACCTGATGTATATGCTGTGGGTGATGTTGCCACTTTTCCT
TTGAAAATGTACAATGAGATTAGAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCT
GAGCAGGCTGTCAAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGAC
TACCTTCCATACTTCTATTCCCGTGCATTCGATTTGTCTTGGCAATTCTACGGTGATAAT
GTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGA
CAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAA
GAGAACAAGGCAATTGCTAAAGTCGCAAAAGTCCAACCCCCTGCTACCTTGGATCAATTG
GCACAGGAGGGCATCAGCTTTGCCTCAAAGATCTAA