Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006913
CDS Infomation

pacid=37457079 polypeptide=PGSC0003DMP400004797 locus=PGSC0003DMG400002681 ID=PGSC0003DMT400006913.v4.03 annot-version=v4.03
Sequence

ATGGCAAAAGATAAAGTTGCAAGTTTAGGCTCTGAAGTTTTCCGGTCAAAGGAAAAATTG
GCCAAGAAAATGCAAGAGTTGAACAAAGAGCTGATAGTTGACGAGACAATTGTTCCTATT
CCTGGATCACCCTCTAATTTTATATTAGGTCCATGTTTTAAGACTATGCTTCCTACGGAG
CTCTCGTCTATTTACCCTTTGGCTGAAGGAGAGAAGCTACTTCTACACTCCGTGAAACTT
GATTGGTTCAAAGGTAAGTATCAGTATTCATGGCCTTCTTATTGTAGCTTATGGATTGAT
TGGGTAGATAGAGTTGAGAAGGCCAAAGGGGAAGTCTGGAAATCAGCTGATATATATGAT
GCCATTCAGTTGTCAAAAAATGATATCCTGATGGACAAAAATCTTCTGTATGCTGCTTTA
TGCTATTGGTCAATCTCCACAAACTCGTTCCACTTCAGATTTGGCATGATGGGGCCAACA
GTACTAGATATTGTTGCTTTGACAGGACTTAGGCCACATGGGGAGGAAGTCAGTGCCATT
CTTGGGATGGCTGGATCGACTTGTCATTTTCCTCATCATGGAACAATTTATTATAATTCC
TTAACTTACAACAAGTATCTTGATGTGTCAAAGTCAGAAACAGCTGTGACAAAGGAAGAA
CATATATCTTTTCTGTTTACATGGCTCAGTAAGCATCTGTTTTGTTACTCTTCTGTAAAC
ATGATTAAGCAATGCACAAAACTGGCATTCGCTCTTGCTGCGGGTAGAAAGCTTGCTTTG
GCACCTTTTCTCTTGTCTAATTTATATCATGGATGCACTGAAATCATTATGAGCAAGTTT
CTTTATGGAAGAGGTCCATTCTGGATCTTGCAATTCTGGCTACAGTCTTACTTTCCAGAA
CTCCAACCTGCTACTTTGGATACCTGTAATTTCCCCACCTGTGCTACTTTCGAGGAATAC
TTCCGCTTTTTTCATAAATGTGCATCTAGAACTATCAGCCAATTCACCCCGTTTTCTTCT
AGGAAGTTTGGACCTGTGTGGTTTCAGAAGTCACTTTATTCTAACTTCCAAAAACTTAAT
AAGCCAGAGCTACAAGATATTTGGGCCAGTTATCTCATTGCTCGAGACCTCCCTTACAGT
ATCCTTCTGGATGAATCTTTGAAGTGCACATATGGGGTAGAACATTATTCTCCAAATCAG
TTTGCCCGACAGTTCGGTATGACTCAGGCTGTCCCCTTCCACCAATCCGCCAATAAACTT
TCAATTAGAAGAAAAGATTTCCAGTCTGCAGATTACACTGAAGAAACTCAGTCAAGGTTT
TGCCAAACAAAAAGGAAGTTTTCATTTGTTCCATTTGATACTAATCCTAGCTCTACTGAG
TTCTTTGGTTCCTGGTGGTCCACTTATATCTATACTCGGGACAAGACTGCTATTGATGTC
CTCAGGAAGATCTCACCGCATGTCATGCCCCTCTGTCCATCTGACAGGCAAAAATTTGCT
GCTCCCCAGCCCAACAGTATTAAAGGCAATTCTGAATCTGCAGGAAAAATTGGCCAGAAT
ATGAAGAGGAAATATGAAGGGGATAGTATTCCATCGCAATCTTTGGCTCAGCAAGATGAG
CCCATACAACAAAAGAACTTGAATGAAGCAGCTGAAAAGATAGCTACAACAACATTATGC
AAGAAGACGAAGACTTACTCGAGGAAATTGTCACCAGGCTCAACTTCTGACATACCTTCT
ACATCAGCCTTCCCTACAAGTTGTACTCCTGCTAATGAAGACAGGACTGAGGCAGACATC
CAAGTTTCCGCTGTTACACCAATCTCCACTTCTGATAAAAATGTTGAGGAATGCACAGTT
TCCCCATCCTTAGATAATACCAGAAGCAAGACATCTGATATTAGTCAACCACCTGACTGT
CCTTTGAAATTTGATAATCTAGAAGGCTTCTTTTCTCGAGTTAGTGGAAAAATTAAATGT
GCTCAATCTCTCGGTTTTACTGCTGATCGATCTTCTCCCATAGATGACAAGAAATCCGCC
ACACTGAAGTCTAAACCGTCAGCAGAAATGCTTGCCACAGCTAAAGGTGATATTAAGAGA
TTACTACTCATACCTTCTCAAGTCATGCTTCTACCCGGAAACTGTTCAGCATTAAGCGCA
GCACTATCAGTACATGCTGGGGCACCGGATTTATCAGCTGAGAGAGCGCTTGCCTTGGAG
AAACTTAAAGAGAACCTTCCACACTTTTCCTTGACCATGCGTAGAGCTAAGAAGGATCAA
GAGGAGTATTATAAGAAAGTGCTCCTCATCGACGAGCTCACAAAAGATCAAGAACTCTAT
ACTAACCTCAAAGATGGAAACAACAAACTTGATAACAAAATCAGCAAGCTGGAGGCAAGC
TTGAAGGCTGCAAAGACAAAAAGAGATGCAATCAAGAAGCAACAATTGAGTTTGGCCAAT
AAGTGTTCTGGAAAGTGTAATGCTCTTGATGAAATGGAAGCTGAGTTTCCTGTCCTGAAG
GAGATGAAGGAGCTAGCTGATTGGGATTTCGCTCGATTGGAAGAAAGCTTGAGTGACTTC
AAGAGTAAGATAATCGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004797
PEP Infomation

pacid=37457079 transcript=PGSC0003DMT400006913 locus=PGSC0003DMG400002681 ID=PGSC0003DMT400006913.v4.03 annot-version=v4.03
Sequence

MAKDKVASLGSEVFRSKEKLAKKMQELNKELIVDETIVPIPGSPSNFILGPCFKTMLPTE
LSSIYPLAEGEKLLLHSVKLDWFKGKYQYSWPSYCSLWIDWVDRVEKAKGEVWKSADIYD
AIQLSKNDILMDKNLLYAALCYWSISTNSFHFRFGMMGPTVLDIVALTGLRPHGEEVSAI
LGMAGSTCHFPHHGTIYYNSLTYNKYLDVSKSETAVTKEEHISFLFTWLSKHLFCYSSVN
MIKQCTKLAFALAAGRKLALAPFLLSNLYHGCTEIIMSKFLYGRGPFWILQFWLQSYFPE
LQPATLDTCNFPTCATFEEYFRFFHKCASRTISQFTPFSSRKFGPVWFQKSLYSNFQKLN
KPELQDIWASYLIARDLPYSILLDESLKCTYGVEHYSPNQFARQFGMTQAVPFHQSANKL
SIRRKDFQSADYTEETQSRFCQTKRKFSFVPFDTNPSSTEFFGSWWSTYIYTRDKTAIDV
LRKISPHVMPLCPSDRQKFAAPQPNSIKGNSESAGKIGQNMKRKYEGDSIPSQSLAQQDE
PIQQKNLNEAAEKIATTTLCKKTKTYSRKLSPGSTSDIPSTSAFPTSCTPANEDRTEADI
QVSAVTPISTSDKNVEECTVSPSLDNTRSKTSDISQPPDCPLKFDNLEGFFSRVSGKIKC
AQSLGFTADRSSPIDDKKSATLKSKPSAEMLATAKGDIKRLLLIPSQVMLLPGNCSALSA
ALSVHAGAPDLSAERALALEKLKENLPHFSLTMRRAKKDQEEYYKKVLLIDELTKDQELY
TNLKDGNNKLDNKISKLEASLKAAKTKRDAIKKQQLSLANKCSGKCNALDEMEAEFPVLK
EMKELADWDFARLEESLSDFKSKIIE*

Transcript Sequence

Transcript ID

PGSC0003DMT400006913
Transcript Infomation

pacid=37457079 locus=PGSC0003DMG400002681 ID=PGSC0003DMT400006913.v4.03 annot-version=v4.03
Sequence

ATGGCAAAAGATAAAGTTGCAAGTTTAGGCTCTGAAGTTTTCCGGTCAAAGGAAAAATTG
GCCAAGAAAATGCAAGAGTTGAACAAAGAGCTGATAGTTGACGAGACAATTGTTCCTATT
CCTGGATCACCCTCTAATTTTATATTAGGTCCATGTTTTAAGACTATGCTTCCTACGGAG
CTCTCGTCTATTTACCCTTTGGCTGAAGGAGAGAAGCTACTTCTACACTCCGTGAAACTT
GATTGGTTCAAAGGTAAGTATCAGTATTCATGGCCTTCTTATTGTAGCTTATGGATTGAT
TGGGTAGATAGAGTTGAGAAGGCCAAAGGGGAAGTCTGGAAATCAGCTGATATATATGAT
GCCATTCAGTTGTCAAAAAATGATATCCTGATGGACAAAAATCTTCTGTATGCTGCTTTA
TGCTATTGGTCAATCTCCACAAACTCGTTCCACTTCAGATTTGGCATGATGGGGCCAACA
GTACTAGATATTGTTGCTTTGACAGGACTTAGGCCACATGGGGAGGAAGTCAGTGCCATT
CTTGGGATGGCTGGATCGACTTGTCATTTTCCTCATCATGGAACAATTTATTATAATTCC
TTAACTTACAACAAGTATCTTGATGTGTCAAAGTCAGAAACAGCTGTGACAAAGGAAGAA
CATATATCTTTTCTGTTTACATGGCTCAGTAAGCATCTGTTTTGTTACTCTTCTGTAAAC
ATGATTAAGCAATGCACAAAACTGGCATTCGCTCTTGCTGCGGGTAGAAAGCTTGCTTTG
GCACCTTTTCTCTTGTCTAATTTATATCATGGATGCACTGAAATCATTATGAGCAAGTTT
CTTTATGGAAGAGGTCCATTCTGGATCTTGCAATTCTGGCTACAGTCTTACTTTCCAGAA
CTCCAACCTGCTACTTTGGATACCTGTAATTTCCCCACCTGTGCTACTTTCGAGGAATAC
TTCCGCTTTTTTCATAAATGTGCATCTAGAACTATCAGCCAATTCACCCCGTTTTCTTCT
AGGAAGTTTGGACCTGTGTGGTTTCAGAAGTCACTTTATTCTAACTTCCAAAAACTTAAT
AAGCCAGAGCTACAAGATATTTGGGCCAGTTATCTCATTGCTCGAGACCTCCCTTACAGT
ATCCTTCTGGATGAATCTTTGAAGTGCACATATGGGGTAGAACATTATTCTCCAAATCAG
TTTGCCCGACAGTTCGGTATGACTCAGGCTGTCCCCTTCCACCAATCCGCCAATAAACTT
TCAATTAGAAGAAAAGATTTCCAGTCTGCAGATTACACTGAAGAAACTCAGTCAAGGTTT
TGCCAAACAAAAAGGAAGTTTTCATTTGTTCCATTTGATACTAATCCTAGCTCTACTGAG
TTCTTTGGTTCCTGGTGGTCCACTTATATCTATACTCGGGACAAGACTGCTATTGATGTC
CTCAGGAAGATCTCACCGCATGTCATGCCCCTCTGTCCATCTGACAGGCAAAAATTTGCT
GCTCCCCAGCCCAACAGTATTAAAGGCAATTCTGAATCTGCAGGAAAAATTGGCCAGAAT
ATGAAGAGGAAATATGAAGGGGATAGTATTCCATCGCAATCTTTGGCTCAGCAAGATGAG
CCCATACAACAAAAGAACTTGAATGAAGCAGCTGAAAAGATAGCTACAACAACATTATGC
AAGAAGACGAAGACTTACTCGAGGAAATTGTCACCAGGCTCAACTTCTGACATACCTTCT
ACATCAGCCTTCCCTACAAGTTGTACTCCTGCTAATGAAGACAGGACTGAGGCAGACATC
CAAGTTTCCGCTGTTACACCAATCTCCACTTCTGATAAAAATGTTGAGGAATGCACAGTT
TCCCCATCCTTAGATAATACCAGAAGCAAGACATCTGATATTAGTCAACCACCTGACTGT
CCTTTGAAATTTGATAATCTAGAAGGCTTCTTTTCTCGAGTTAGTGGAAAAATTAAATGT
GCTCAATCTCTCGGTTTTACTGCTGATCGATCTTCTCCCATAGATGACAAGAAATCCGCC
ACACTGAAGTCTAAACCGTCAGCAGAAATGCTTGCCACAGCTAAAGGTGATATTAAGAGA
TTACTACTCATACCTTCTCAAGTCATGCTTCTACCCGGAAACTGTTCAGCATTAAGCGCA
GCACTATCAGTACATGCTGGGGCACCGGATTTATCAGCTGAGAGAGCGCTTGCCTTGGAG
AAACTTAAAGAGAACCTTCCACACTTTTCCTTGACCATGCGTAGAGCTAAGAAGGATCAA
GAGGAGTATTATAAGAAAGTGCTCCTCATCGACGAGCTCACAAAAGATCAAGAACTCTAT
ACTAACCTCAAAGATGGAAACAACAAACTTGATAACAAAATCAGCAAGCTGGAGGCAAGC
TTGAAGGCTGCAAAGACAAAAAGAGATGCAATCAAGAAGCAACAATTGAGTTTGGCCAAT
AAGTGTTCTGGAAAGTGTAATGCTCTTGATGAAATGGAAGCTGAGTTTCCTGTCCTGAAG
GAGATGAAGGAGCTAGCTGATTGGGATTTCGCTCGATTGGAAGAAAGCTTGAGTGACTTC
AAGAGTAAGATAATCGAGTGA