Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006862
CDS Infomation

pacid=37456893 polypeptide=PGSC0003DMP400004771 locus=PGSC0003DMG400002664 ID=PGSC0003DMT400006862.v4.03 annot-version=v4.03
Sequence

ATGGGTTCATATTCTGGTAGTTGTGAAATTATTGAGGCGAAAGATGAGCTGGTGATGTTC
CAACGTTCTGAAAGGTCAGGACAAGTACGAGAATCAGGCAGAAAACAGAAGCCTCCTTTG
GTTAGAAAAGGACCTAATAAATTCTTAGAAGATGATATTAATCATCTTTTTGCATCCATC
GATCTAAGATCATCAAAAAGTCTGGATTTGTCAGATCATGTGAGAAGAGATGCCTCAAAA
AGGCCAATGAGGGGCGATGGATCTCATTCTCCAGGAATTGGGTTTTCAGAGCCAGTCTCT
CTGAAGCAGGCCTTACGGGGTTTATGCATTTCACAGGCGGCAGAAATGGCGGCAATGAAG
CGGCTATCCAAGCCACCGGGTTCTCCAAGCATTACAGAAGCTGGAAGGATTACAAGCTCT
TACAGGTTTGCAGATCCAAGCGACTCTGGTTTCATTCACACAGAAAGACTAGTACAAGAT
GAAAGCACTTCAGGAACACTCGACAAAGTGCCCCATTACCGCCAAGAACTGTATGTTAAA
TCAGCAAACCATAGTCCCCATTCTTCTCCACGACTTGTCATTAAGCCATCCATCTCAATG
CGCCAAAATAACAGAATAGTGCCGGCAGAAAGCACGTCTAACTCTTCTCAGAGGCCGCCT
CAGTACATTGGAGATCCAAAGCTACAGTCACGAGGTCAAAGTACCCTTTGTTCTCCTAAA
TGTGTTAGTAAACAGACTATTAAGAGTGCGGAGTCCATTGCCAAGCAAAATGAGAGAATA
TTTCTGGAAGAAAATGTCACGAACTATGGTAAAAAGGTCTCTCAACAGCTTACACAAGCA
GAGGTGAGGTTACCAAACCAAAACACTTCACGTTCGCCTAGACTTGTTGATAAACCAGTC
ATTGTGTCTGCTGAGTCAACTGTGCAGCGAAAAGAGAGGACAATGCCAGCAGTAAGCACA
TCAAGCACTTCACAAAAGATGCCTCGATACCCCGAAGAACCCAAGATGAAGTTACCAGAC
CAAAGTGTCCTGTCTTCTCCTAGATCGGTTGAAGTACCAATTATTCAGAGTTTTAACTCC
CCTCACCTGAAAAAGGAGAATGCATCTGTGTCGAATCTTCATGAGATTAAATCACTACGA
ACTGTGTCAATTGAGGAAGAAGTCCAAACTTCAGTTGCATCCTCATCATCATTTGCCTCT
AATAATGATGTTTTGGGATCTGGACCAAAAAATTTGGAGCATAATTCCAATAGAAGTGCG
GTTGCATCATTTAGAATAGCAAGCAAAAAAGCTCCTAAGCTGAGACGGAAAGCCATATTG
CAAAATGTCTCTTCATCTACTGCCACGAGAAGCAACAAGGAGAGCAAATCAAACAAAAGC
ACCACTCAGACTGCAAAGCCAGCAGTCAAGCACAAGACCCTTGTTAAGAAGAAAGCGAAA
CCGGAAGCAACAGCAACATCTGGCACTTTTAATCTGACCTATGAAGTAAATGGTCCAATG
GAATCACCTAAGCAACTTATCTGTCAGCAATGTCAGTGTGCTCTCAAGAATGTAGGAAAT
GAGTCTGGTAAGGGACCTACAATTCAAGGTTCTGGATGTACAGCCGCTGAAGCAAGTGAA
AATAGCAATAACTGTCATGCTACTAAACCAGGCTTCGCCAATAACGGCCATGATGACAGG
GTTACCCCTGTCTTGAAATTCAACAAGGCATCAAAATCTAGAGAGCCAGGGGACTTTTCA
CAGAGCTCAAAGAGTAGTATTGGTGATTACAGTTGTAGCACAACCATCAGTGACGAGAGC
AATCTAAGTGGGTCTAGTACTGGGAATAGGCCACACATGTCTAAAGATGGCAGGTGGGAG
GCTATCAATCAGGTGAGGAAACATCACGGGTTCTTGGGGTTAAGTCATTTCAATTTATTG
AAGAAGCTTGGTTGTGGAGACATTGGCACAGTGTATCTTGCTGAGCTGCTGGAAACTAAT
TGCTTCTTTGCAATAAAAGTTATGGATAATGAATTTTTGGCAAGAAGGAAAAAGTTGCCA
AGGGCCCAAACTGAAAGAGAGATTTTGAGAATGCTAGATCACCCTTTTCTACCTACGCTC
TATGCGCAGTTTACATCGGACAACTTATCATGCTTAGTTATGGAGTTTTGTCCAGGTGGT
GATTTGCATGTCCTCAGGCAGAAGCAGCCTTGCAGAAATTTTCCTGAACCAGCAGCACGG
TTTTATGTGGCTGAAGTCCTCCTTGCTCTGGAGTATTTGCATATGCTTGGAGTTGTATAT
CGGGATTTGAAACCTGAAAACATACTGGTCCGGGAAGATGGTCACATCATGCTTACAGAT
TTTGACCTCTCACTCAGATGTTCAGTTAATCCCACTCTTCTAAAATCATCTTCATTGGGG
GTTGAAGCTCCCAGGATTTCTGGTCCTTGTGCGGGCTCTAATTGTATTGATCCATTTTGT
TCTGGACCGTCCTGTCAAGTTTCTTGCTTTAGCCCCAGAATTTTACCTGCCGCCGCACGA
GCAAGAAGGCTGAAAGCAGAAGCTGCAGCCTTTAACAGATCATTGCCTCAGCTTGTGGTA
GAGCCAACAGAAGCACGGTCCAACTCATTTGTTGGTACACATGAATATTTGGCTCCCGAG
ATCATTAAAGGTGAGGGCCATGGGAGTGCTGTTGATTGGTGGACTTTAGGTGTTTTTCTT
TACGAGCTTCTATATGGGAAGACACCATTTAAAGGTGCTGGAAATGAAGAAACTTTGGCC
AATGTGGTCATGCAGAACCTCAGATTTCCCGATAGCCCGCTTGTCAGTCTTCAGGCAAGG
GATCTAATCAGAAGACTTCTTGTGAAGGAGCCTGAGAATCGATTGGGAACAGAAACAGGG
GCTGCTGAGATTAAACGACACCCTTTCTTCGATGGTATGAACTGGGCATTGATAAGGTGT
GCCATTCCACCAGAAGTACCTGATCTTTGTGACATTGGATTTACAAAACTAGCTTATAAG
GAGAAGAGCAACATGTTTTTAGAGTATAGTTCAAAAGAGCATTTAGAATTTGAGTTGTTC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400004771
PEP Infomation

pacid=37456893 transcript=PGSC0003DMT400006862 locus=PGSC0003DMG400002664 ID=PGSC0003DMT400006862.v4.03 annot-version=v4.03
Sequence

MGSYSGSCEIIEAKDELVMFQRSERSGQVRESGRKQKPPLVRKGPNKFLEDDINHLFASI
DLRSSKSLDLSDHVRRDASKRPMRGDGSHSPGIGFSEPVSLKQALRGLCISQAAEMAAMK
RLSKPPGSPSITEAGRITSSYRFADPSDSGFIHTERLVQDESTSGTLDKVPHYRQELYVK
SANHSPHSSPRLVIKPSISMRQNNRIVPAESTSNSSQRPPQYIGDPKLQSRGQSTLCSPK
CVSKQTIKSAESIAKQNERIFLEENVTNYGKKVSQQLTQAEVRLPNQNTSRSPRLVDKPV
IVSAESTVQRKERTMPAVSTSSTSQKMPRYPEEPKMKLPDQSVLSSPRSVEVPIIQSFNS
PHLKKENASVSNLHEIKSLRTVSIEEEVQTSVASSSSFASNNDVLGSGPKNLEHNSNRSA
VASFRIASKKAPKLRRKAILQNVSSSTATRSNKESKSNKSTTQTAKPAVKHKTLVKKKAK
PEATATSGTFNLTYEVNGPMESPKQLICQQCQCALKNVGNESGKGPTIQGSGCTAAEASE
NSNNCHATKPGFANNGHDDRVTPVLKFNKASKSREPGDFSQSSKSSIGDYSCSTTISDES
NLSGSSTGNRPHMSKDGRWEAINQVRKHHGFLGLSHFNLLKKLGCGDIGTVYLAELLETN
CFFAIKVMDNEFLARRKKLPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEFCPGG
DLHVLRQKQPCRNFPEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTD
FDLSLRCSVNPTLLKSSSLGVEAPRISGPCAGSNCIDPFCSGPSCQVSCFSPRILPAAAR
ARRLKAEAAAFNRSLPQLVVEPTEARSNSFVGTHEYLAPEIIKGEGHGSAVDWWTLGVFL
YELLYGKTPFKGAGNEETLANVVMQNLRFPDSPLVSLQARDLIRRLLVKEPENRLGTETG
AAEIKRHPFFDGMNWALIRCAIPPEVPDLCDIGFTKLAYKEKSNMFLEYSSKEHLEFELF
*

Transcript Sequence

Transcript ID

PGSC0003DMT400006862
Transcript Infomation

pacid=37456893 locus=PGSC0003DMG400002664 ID=PGSC0003DMT400006862.v4.03 annot-version=v4.03
Sequence

ATGGGTTCATATTCTGGTAGTTGTGAAATTATTGAGGCGAAAGATGAGCTGGTGATGTTC
CAACGTTCTGAAAGGTCAGGACAAGTACGAGAATCAGGCAGAAAACAGAAGCCTCCTTTG
GTTAGAAAAGGACCTAATAAATTCTTAGAAGATGATATTAATCATCTTTTTGCATCCATC
GATCTAAGATCATCAAAAAGTCTGGATTTGTCAGATCATGTGAGAAGAGATGCCTCAAAA
AGGCCAATGAGGGGCGATGGATCTCATTCTCCAGGAATTGGGTTTTCAGAGCCAGTCTCT
CTGAAGCAGGCCTTACGGGGTTTATGCATTTCACAGGCGGCAGAAATGGCGGCAATGAAG
CGGCTATCCAAGCCACCGGGTTCTCCAAGCATTACAGAAGCTGGAAGGATTACAAGCTCT
TACAGGTTTGCAGATCCAAGCGACTCTGGTTTCATTCACACAGAAAGACTAGTACAAGAT
GAAAGCACTTCAGGAACACTCGACAAAGTGCCCCATTACCGCCAAGAACTGTATGTTAAA
TCAGCAAACCATAGTCCCCATTCTTCTCCACGACTTGTCATTAAGCCATCCATCTCAATG
CGCCAAAATAACAGAATAGTGCCGGCAGAAAGCACGTCTAACTCTTCTCAGAGGCCGCCT
CAGTACATTGGAGATCCAAAGCTACAGTCACGAGGTCAAAGTACCCTTTGTTCTCCTAAA
TGTGTTAGTAAACAGACTATTAAGAGTGCGGAGTCCATTGCCAAGCAAAATGAGAGAATA
TTTCTGGAAGAAAATGTCACGAACTATGGTAAAAAGGTCTCTCAACAGCTTACACAAGCA
GAGGTGAGGTTACCAAACCAAAACACTTCACGTTCGCCTAGACTTGTTGATAAACCAGTC
ATTGTGTCTGCTGAGTCAACTGTGCAGCGAAAAGAGAGGACAATGCCAGCAGTAAGCACA
TCAAGCACTTCACAAAAGATGCCTCGATACCCCGAAGAACCCAAGATGAAGTTACCAGAC
CAAAGTGTCCTGTCTTCTCCTAGATCGGTTGAAGTACCAATTATTCAGAGTTTTAACTCC
CCTCACCTGAAAAAGGAGAATGCATCTGTGTCGAATCTTCATGAGATTAAATCACTACGA
ACTGTGTCAATTGAGGAAGAAGTCCAAACTTCAGTTGCATCCTCATCATCATTTGCCTCT
AATAATGATGTTTTGGGATCTGGACCAAAAAATTTGGAGCATAATTCCAATAGAAGTGCG
GTTGCATCATTTAGAATAGCAAGCAAAAAAGCTCCTAAGCTGAGACGGAAAGCCATATTG
CAAAATGTCTCTTCATCTACTGCCACGAGAAGCAACAAGGAGAGCAAATCAAACAAAAGC
ACCACTCAGACTGCAAAGCCAGCAGTCAAGCACAAGACCCTTGTTAAGAAGAAAGCGAAA
CCGGAAGCAACAGCAACATCTGGCACTTTTAATCTGACCTATGAAGTAAATGGTCCAATG
GAATCACCTAAGCAACTTATCTGTCAGCAATGTCAGTGTGCTCTCAAGAATGTAGGAAAT
GAGTCTGGTAAGGGACCTACAATTCAAGGTTCTGGATGTACAGCCGCTGAAGCAAGTGAA
AATAGCAATAACTGTCATGCTACTAAACCAGGCTTCGCCAATAACGGCCATGATGACAGG
GTTACCCCTGTCTTGAAATTCAACAAGGCATCAAAATCTAGAGAGCCAGGGGACTTTTCA
CAGAGCTCAAAGAGTAGTATTGGTGATTACAGTTGTAGCACAACCATCAGTGACGAGAGC
AATCTAAGTGGGTCTAGTACTGGGAATAGGCCACACATGTCTAAAGATGGCAGGTGGGAG
GCTATCAATCAGGTGAGGAAACATCACGGGTTCTTGGGGTTAAGTCATTTCAATTTATTG
AAGAAGCTTGGTTGTGGAGACATTGGCACAGTGTATCTTGCTGAGCTGCTGGAAACTAAT
TGCTTCTTTGCAATAAAAGTTATGGATAATGAATTTTTGGCAAGAAGGAAAAAGTTGCCA
AGGGCCCAAACTGAAAGAGAGATTTTGAGAATGCTAGATCACCCTTTTCTACCTACGCTC
TATGCGCAGTTTACATCGGACAACTTATCATGCTTAGTTATGGAGTTTTGTCCAGGTGGT
GATTTGCATGTCCTCAGGCAGAAGCAGCCTTGCAGAAATTTTCCTGAACCAGCAGCACGG
TTTTATGTGGCTGAAGTCCTCCTTGCTCTGGAGTATTTGCATATGCTTGGAGTTGTATAT
CGGGATTTGAAACCTGAAAACATACTGGTCCGGGAAGATGGTCACATCATGCTTACAGAT
TTTGACCTCTCACTCAGATGTTCAGTTAATCCCACTCTTCTAAAATCATCTTCATTGGGG
GTTGAAGCTCCCAGGATTTCTGGTCCTTGTGCGGGCTCTAATTGTATTGATCCATTTTGT
TCTGGACCGTCCTGTCAAGTTTCTTGCTTTAGCCCCAGAATTTTACCTGCCGCCGCACGA
GCAAGAAGGCTGAAAGCAGAAGCTGCAGCCTTTAACAGATCATTGCCTCAGCTTGTGGTA
GAGCCAACAGAAGCACGGTCCAACTCATTTGTTGGTACACATGAATATTTGGCTCCCGAG
ATCATTAAAGGTGAGGGCCATGGGAGTGCTGTTGATTGGTGGACTTTAGGTGTTTTTCTT
TACGAGCTTCTATATGGGAAGACACCATTTAAAGGTGCTGGAAATGAAGAAACTTTGGCC
AATGTGGTCATGCAGAACCTCAGATTTCCCGATAGCCCGCTTGTCAGTCTTCAGGCAAGG
GATCTAATCAGAAGACTTCTTGTGAAGGAGCCTGAGAATCGATTGGGAACAGAAACAGGG
GCTGCTGAGATTAAACGACACCCTTTCTTCGATGGTATGAACTGGGCATTGATAAGGTGT
GCCATTCCACCAGAAGTACCTGATCTTTGTGACATTGGATTTACAAAACTAGCTTATAAG
GAGAAGAGCAACATGTTTTTAGAGTATAGTTCAAAAGAGCATTTAGAATTTGAGTTGTTC
TAG