Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006820
CDS Infomation

pacid=37459500 polypeptide=PGSC0003DMP400004740 locus=PGSC0003DMG400002643 ID=PGSC0003DMT400006820.v4.03 annot-version=v4.03
Sequence

ATGACTTTGAATTCGATTAAAGTGGAAGATTCATCTGGAAATACAAATGACGGAGCAGAG
GCTTCGTCTTCGCAATCGAACGGTGTACATAAGGTATGTTTGCCGCCTCACCGGACGACA
TTTCAAAAACTCCGGCATAGATTGTCGGAGATATTTTTCCCAGATGATCCACTTCACAGG
TTCAAGAACCAAACGACGTTGAGGAAATTTGTTTTGGGTTTACAGTTTTTCTTCCCTGTT
TTCGAATGGGGACCTAAGTATAATCTTATGCTTTTAAGATCTGATATCATTGCCGGCATT
ACAATTGCTAGCCTTGCTATACCTCAAGGAATCAGTTATGCTAAACTTGCTAATTTGCCA
CCTATTATTGGGTTATATTCAAGCTTTGTTCCCCCATTAATATATTCAATTTTGGGAAGT
TCAAGACATTTAGCCGTTGGACCAGTATCCATAGCCTCACTTGTGATGGGAACCATGCTC
AGCCAAGCAGTTACATACAGCAAAGAGCCAGCTTTATATCTTCAACTTGCTTTCACAGCA
ACTCTTATTGCAGGATGCTTGCAAGCTGCAATGGGTTTCTTCAGGTTAGGATTCATCATT
GATTTTCTGTCTAAGGCCACTCTGCTAGGGTTCATGGCTGGTGCAGCAGTCATTGTCTCT
TTGCAACAACTGAAAGGATTGTTAGGGATAGTTCACTTCACAAACAGGATGGAAATAATT
CCTGTTTTGACCTCGGTTTTCGAAAACAGAAATGAGTGGATGTGGCAAACTGTTGTTATG
GGTGGTTGTTTCCTCATATTTCTGCTCACTGCAAGGCAAATAAGTGCAAGAAATCCAAAA
CTTTTCTGGGTTTCCGCAGCAGCTCCATTAGTATCAGTTATTCTCTCAACTGTCATAGTT
TACCTAATCAAAAATGAGACACACGCGATTCCAACTATTGGACACTTGCCCAAGGGGATA
AATCCACCATCAGTGAACAAGTTACATTTTGGTGGCCCTTTTATGTCTCTTGCTCTCAGA
GTTGGCATTATAACTGGAATCTTAGCGCTCACAGAAGGGATTGCAGTAGGAAGGACATTT
GCTGCTATGGAGAACTACCAAGTTGATGGTAACAAGGAAATGATTGCTATTGGACTCATG
AACATAGTTGGCTCTTGTGCCTCCTGCTTTGTCACCACAGGGTCATTTTCTCGATCTGCT
GTAAGTTACAACGCTGGAGGAAAATCTGTTGTTTCAAATATAGTAATGGCAACAACTGTA
CTTATCACACTGCTGTTTCTCATGCCGTTGTTCCATTACACCCCTAACGTCATCTTGGCA
GCAATTATTATAACAGCAGTGATCGGGCTAATTGATTATCAAGGTGCATTCCGTTTATGG
AAAGTTGACAAACTAGACTGCATCGCGTGCTTGTCTTCCTTTTTTGGTGTTCTTTTCATC
TCAGTGGCTATTGGCCTACTCATAGCAGTCGGTATTTCAGTTTTCAAGATCCTATTACAT
GTTACAAGGCCAAATACAAATGTCCTGGGCTACATTTCGAGTACTCGTTCATTTCAAAGC
CTAAGCAGATACACCACTGCTGTTAGGATTCCTTCTTTCCTTATCATAGCTGTTGAGGCT
CCTTTCTACTTTGCAAATTCTACCTACCTACATGAAAGGACATTGAGATGGATTCGAGAA
GAGGAAGACAGGATCAAAGCCAACCAAGAACCACCAATCAAATGTGTAATTCTTGACATG
ACAGCTGTGACAGCTATAGACACTAGTGGCATTGATACAATATGTGAACTTAGAAGAATA
CTTGAGAAAAGATCACTTAAGCTTGTGCTGGCAAATCCAGTTGGAAACGTTATGGAAAAG
CTGTTTAACTCGAATGCTCTTGAGGCTTTTGGGTTAGACGGATTATATCTAACAGTTTCT
GAAGCTGTGGACGATATTTCGTCTTCTTGGAAGCCTGAAAAGGGGCCAGCTCAACCACTA
ACTATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400004740
PEP Infomation

pacid=37459500 transcript=PGSC0003DMT400006820 locus=PGSC0003DMG400002643 ID=PGSC0003DMT400006820.v4.03 annot-version=v4.03
Sequence

MTLNSIKVEDSSGNTNDGAEASSSQSNGVHKVCLPPHRTTFQKLRHRLSEIFFPDDPLHR
FKNQTTLRKFVLGLQFFFPVFEWGPKYNLMLLRSDIIAGITIASLAIPQGISYAKLANLP
PIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGTMLSQAVTYSKEPALYLQLAFTA
TLIAGCLQAAMGFFRLGFIIDFLSKATLLGFMAGAAVIVSLQQLKGLLGIVHFTNRMEII
PVLTSVFENRNEWMWQTVVMGGCFLIFLLTARQISARNPKLFWVSAAAPLVSVILSTVIV
YLIKNETHAIPTIGHLPKGINPPSVNKLHFGGPFMSLALRVGIITGILALTEGIAVGRTF
AAMENYQVDGNKEMIAIGLMNIVGSCASCFVTTGSFSRSAVSYNAGGKSVVSNIVMATTV
LITLLFLMPLFHYTPNVILAAIIITAVIGLIDYQGAFRLWKVDKLDCIACLSSFFGVLFI
SVAIGLLIAVGISVFKILLHVTRPNTNVLGYISSTRSFQSLSRYTTAVRIPSFLIIAVEA
PFYFANSTYLHERTLRWIREEEDRIKANQEPPIKCVILDMTAVTAIDTSGIDTICELRRI
LEKRSLKLVLANPVGNVMEKLFNSNALEAFGLDGLYLTVSEAVDDISSSWKPEKGPAQPL
TI*

Transcript Sequence

Transcript ID

PGSC0003DMT400006820
Transcript Infomation

pacid=37459500 locus=PGSC0003DMG400002643 ID=PGSC0003DMT400006820.v4.03 annot-version=v4.03
Sequence

ATGACTTTGAATTCGATTAAAGTGGAAGATTCATCTGGAAATACAAATGACGGAGCAGAG
GCTTCGTCTTCGCAATCGAACGGTGTACATAAGGTATGTTTGCCGCCTCACCGGACGACA
TTTCAAAAACTCCGGCATAGATTGTCGGAGATATTTTTCCCAGATGATCCACTTCACAGG
TTCAAGAACCAAACGACGTTGAGGAAATTTGTTTTGGGTTTACAGTTTTTCTTCCCTGTT
TTCGAATGGGGACCTAAGTATAATCTTATGCTTTTAAGATCTGATATCATTGCCGGCATT
ACAATTGCTAGCCTTGCTATACCTCAAGGAATCAGTTATGCTAAACTTGCTAATTTGCCA
CCTATTATTGGGTTATATTCAAGCTTTGTTCCCCCATTAATATATTCAATTTTGGGAAGT
TCAAGACATTTAGCCGTTGGACCAGTATCCATAGCCTCACTTGTGATGGGAACCATGCTC
AGCCAAGCAGTTACATACAGCAAAGAGCCAGCTTTATATCTTCAACTTGCTTTCACAGCA
ACTCTTATTGCAGGATGCTTGCAAGCTGCAATGGGTTTCTTCAGGTTAGGATTCATCATT
GATTTTCTGTCTAAGGCCACTCTGCTAGGGTTCATGGCTGGTGCAGCAGTCATTGTCTCT
TTGCAACAACTGAAAGGATTGTTAGGGATAGTTCACTTCACAAACAGGATGGAAATAATT
CCTGTTTTGACCTCGGTTTTCGAAAACAGAAATGAGTGGATGTGGCAAACTGTTGTTATG
GGTGGTTGTTTCCTCATATTTCTGCTCACTGCAAGGCAAATAAGTGCAAGAAATCCAAAA
CTTTTCTGGGTTTCCGCAGCAGCTCCATTAGTATCAGTTATTCTCTCAACTGTCATAGTT
TACCTAATCAAAAATGAGACACACGCGATTCCAACTATTGGACACTTGCCCAAGGGGATA
AATCCACCATCAGTGAACAAGTTACATTTTGGTGGCCCTTTTATGTCTCTTGCTCTCAGA
GTTGGCATTATAACTGGAATCTTAGCGCTCACAGAAGGGATTGCAGTAGGAAGGACATTT
GCTGCTATGGAGAACTACCAAGTTGATGGTAACAAGGAAATGATTGCTATTGGACTCATG
AACATAGTTGGCTCTTGTGCCTCCTGCTTTGTCACCACAGGGTCATTTTCTCGATCTGCT
GTAAGTTACAACGCTGGAGGAAAATCTGTTGTTTCAAATATAGTAATGGCAACAACTGTA
CTTATCACACTGCTGTTTCTCATGCCGTTGTTCCATTACACCCCTAACGTCATCTTGGCA
GCAATTATTATAACAGCAGTGATCGGGCTAATTGATTATCAAGGTGCATTCCGTTTATGG
AAAGTTGACAAACTAGACTGCATCGCGTGCTTGTCTTCCTTTTTTGGTGTTCTTTTCATC
TCAGTGGCTATTGGCCTACTCATAGCAGTCGGTATTTCAGTTTTCAAGATCCTATTACAT
GTTACAAGGCCAAATACAAATGTCCTGGGCTACATTTCGAGTACTCGTTCATTTCAAAGC
CTAAGCAGATACACCACTGCTGTTAGGATTCCTTCTTTCCTTATCATAGCTGTTGAGGCT
CCTTTCTACTTTGCAAATTCTACCTACCTACATGAAAGGACATTGAGATGGATTCGAGAA
GAGGAAGACAGGATCAAAGCCAACCAAGAACCACCAATCAAATGTGTAATTCTTGACATG
ACAGCTGTGACAGCTATAGACACTAGTGGCATTGATACAATATGTGAACTTAGAAGAATA
CTTGAGAAAAGATCACTTAAGCTTGTGCTGGCAAATCCAGTTGGAAACGTTATGGAAAAG
CTGTTTAACTCGAATGCTCTTGAGGCTTTTGGGTTAGACGGATTATATCTAACAGTTTCT
GAAGCTGTGGACGATATTTCGTCTTCTTGGAAGCCTGAAAAGGGGCCAGCTCAACCACTA
ACTATATGA