Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006809
CDS Infomation

pacid=37460070 polypeptide=PGSC0003DMP400004730 locus=PGSC0003DMG401002640 ID=PGSC0003DMT400006809.v4.03 annot-version=v4.03
Sequence

ATGGAGGAATTAAATGTAGTAAGACTATCACCCTTGAGGTTGAATGGTCCCGTCCCTGCG
AAGTCAACATTGTCAGGAAGATCAACTCCTAGAGGAGGATCTCCTTCCTTCAGGAGATTG
AATTCTGGACGAACACCGCGAAGAGATGGTAAAAGTAGTGCTTTTGGTTCTCAGTGGTTT
AGAAGTAACCGCATTTTACTTTGGCTGCTTCTGATTACTCTTTGGGCCTATGGAGGATTT
TATGTTCAGTCAAGATGGGCTCATGGAGACAATAAGGAAGGTATTTTTGGAGGAACTGGA
GGTGATGTTGCCAATGGAACTTCTCAACCAGAGGAAAAAAATCAACGAATTCTAGTTGCG
AATGAGGAGTCTTTAGCAGTCAAGCCTCCAAGTAATAAAACACAGGGCAATTCAATGGAC
CTGGATGTAGTCTTGGCTAAACAGGGAAACAGTGTGGTATCTGACAAGGTTTCATCTTCT
AAGAAGAAGAGCAAGAAGTCTACACGTGCTTCTCGTAGGAAGACTCATGGTAAGAAGAAG
GTGGTGGCAGAAGTAAAAACTGATGATATTGAAGTTCAAGAAGAGGAAATACCCAAGCGA
AATACTACGTATGGCCTGCTAGTTGGTCCATTTGGGTCAATAGAGGACAAAATTTTGGAG
TGGAGCCCTGAAAAGCGGTCAGGAACCTGTGATAGAAAAAGTCAGTTTGCACGTCTTGTT
TGGTCTAGGAAATTTGTGCTGATACTCCATGAACTCTCTATGACTGGAGCTCCACTTGCC
ATGTTGGAATTGGCTACGGAGCTTTTAAGCTGTGGGGCCACAGTTTATGTAGTACCTCTC
AGCAAAAGAGGGGGTTTAATGTCAGAACTATCTAGAAGAAAGATCAAAGTGCTAGAAGAC
AAATCAGACCTCAGTTTCAAAACAGCCATGAAAGCAGATCTTATTATTGCAGGTTCTGCA
GTATGTGCATCATGGATAGAACAATATGCAGCACGTACTGTGCTAGGTTCAAGTCAAATT
ACTTGGTGGATCATGGAAAACCGGCGGGAATACTTCGATCGGGCTAAACTTGCTTTCAAC
CGAGTGAAGAAACTTATCTTTCTTTCTGAATCACAGTCTAAGCGGTGGTTAGCTTGGTGT
GAGGAAGAACATATAAAGCTCAAAACTCAGCCTGCACTGGTTCCACTTTCTATTAGTGAT
GAACTGGCTTTTGTAGCAGGCATCCCGTGCTCACTGAGCACTCCGCTATTCAGTCCTGAG
AAGATGCTGGAAAAGAGGCAGCTACTAAGAGATTTTGTGAGGAAAGAAATGGGATTGACA
GACAATGATATGCTTGTCATGTCCTTGAGTAGTATAAACCCTGGAAAGGGTCAGTTTCTG
CTTCTTGAAACAACGCGCTTACTGATTGAGGGAGCTCCTCCTCTAAATGGATCTGCTGTT
AAAAGACGAGAATATCAGAAAAGGACATTGCTTTATAACTGGAAACAATTTGGTGAATGG
AAAAAAGAATCCTCCACCTTGTCAAATAACCCACAAACTGAAACATTGCAGGTACCCCAG
CTTTTCATTAAGGGGGTTAACTATACAGCTGGAATTGAAAATGATAGAGGAACTCGAAAG
CTTTTCTCCCTAACTGAAGGGAAGCAGGGAGAAAAGCTTAAGGTTCTTATTGGCTCAGTC
GGATCCAAGAGCAATAAGGTGCCTTATGTTAAAGCACTTCTCAACTTTCTAAATCAGCAT
TCTAACTTGTCAAACACAGTACTATGGACTCCATCAACCACTCGTGTCGCTGCACTTTAT
GCTGCTGCAGATGCTTATGTAATGAATTCTCAGGGACTTGGAGAAACATTTGGGAGAGTG
ACAATTGAAGCAATGGCATTTGGTCTTCCTGTGCTGGGAACAGATGCCGGAGGCACAAAG
GAGATCGTTGAACATAACGTAACAGGTCTTCTTCATACTTTGGGACGTCCAGGCACTCAA
ATCCTCGCCAACAATCTCCAGTATTTGCTGAACAATCCCTCGGAAAGGCAGCGATTGGGA
AGCAATGGAAGAAAGAAAGTAAAGGATATGTACCTAAAGAAGCACATGTACAAGAGATTC
GGAGAAGTACTATACGACTGCATGAGAATAAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400004730
PEP Infomation

pacid=37460070 transcript=PGSC0003DMT400006809 locus=PGSC0003DMG401002640 ID=PGSC0003DMT400006809.v4.03 annot-version=v4.03
Sequence

MEELNVVRLSPLRLNGPVPAKSTLSGRSTPRGGSPSFRRLNSGRTPRRDGKSSAFGSQWF
RSNRILLWLLLITLWAYGGFYVQSRWAHGDNKEGIFGGTGGDVANGTSQPEEKNQRILVA
NEESLAVKPPSNKTQGNSMDLDVVLAKQGNSVVSDKVSSSKKKSKKSTRASRRKTHGKKK
VVAEVKTDDIEVQEEEIPKRNTTYGLLVGPFGSIEDKILEWSPEKRSGTCDRKSQFARLV
WSRKFVLILHELSMTGAPLAMLELATELLSCGATVYVVPLSKRGGLMSELSRRKIKVLED
KSDLSFKTAMKADLIIAGSAVCASWIEQYAARTVLGSSQITWWIMENRREYFDRAKLAFN
RVKKLIFLSESQSKRWLAWCEEEHIKLKTQPALVPLSISDELAFVAGIPCSLSTPLFSPE
KMLEKRQLLRDFVRKEMGLTDNDMLVMSLSSINPGKGQFLLLETTRLLIEGAPPLNGSAV
KRREYQKRTLLYNWKQFGEWKKESSTLSNNPQTETLQVPQLFIKGVNYTAGIENDRGTRK
LFSLTEGKQGEKLKVLIGSVGSKSNKVPYVKALLNFLNQHSNLSNTVLWTPSTTRVAALY
AAADAYVMNSQGLGETFGRVTIEAMAFGLPVLGTDAGGTKEIVEHNVTGLLHTLGRPGTQ
ILANNLQYLLNNPSERQRLGSNGRKKVKDMYLKKHMYKRFGEVLYDCMRIK*

Transcript Sequence

Transcript ID

PGSC0003DMT400006809
Transcript Infomation

pacid=37460070 locus=PGSC0003DMG401002640 ID=PGSC0003DMT400006809.v4.03 annot-version=v4.03
Sequence

ATGGAGGAATTAAATGTAGTAAGACTATCACCCTTGAGGTTGAATGGTCCCGTCCCTGCG
AAGTCAACATTGTCAGGAAGATCAACTCCTAGAGGAGGATCTCCTTCCTTCAGGAGATTG
AATTCTGGACGAACACCGCGAAGAGATGGTAAAAGTAGTGCTTTTGGTTCTCAGTGGTTT
AGAAGTAACCGCATTTTACTTTGGCTGCTTCTGATTACTCTTTGGGCCTATGGAGGATTT
TATGTTCAGTCAAGATGGGCTCATGGAGACAATAAGGAAGGTATTTTTGGAGGAACTGGA
GGTGATGTTGCCAATGGAACTTCTCAACCAGAGGAAAAAAATCAACGAATTCTAGTTGCG
AATGAGGAGTCTTTAGCAGTCAAGCCTCCAAGTAATAAAACACAGGGCAATTCAATGGAC
CTGGATGTAGTCTTGGCTAAACAGGGAAACAGTGTGGTATCTGACAAGGTTTCATCTTCT
AAGAAGAAGAGCAAGAAGTCTACACGTGCTTCTCGTAGGAAGACTCATGGTAAGAAGAAG
GTGGTGGCAGAAGTAAAAACTGATGATATTGAAGTTCAAGAAGAGGAAATACCCAAGCGA
AATACTACGTATGGCCTGCTAGTTGGTCCATTTGGGTCAATAGAGGACAAAATTTTGGAG
TGGAGCCCTGAAAAGCGGTCAGGAACCTGTGATAGAAAAAGTCAGTTTGCACGTCTTGTT
TGGTCTAGGAAATTTGTGCTGATACTCCATGAACTCTCTATGACTGGAGCTCCACTTGCC
ATGTTGGAATTGGCTACGGAGCTTTTAAGCTGTGGGGCCACAGTTTATGTAGTACCTCTC
AGCAAAAGAGGGGGTTTAATGTCAGAACTATCTAGAAGAAAGATCAAAGTGCTAGAAGAC
AAATCAGACCTCAGTTTCAAAACAGCCATGAAAGCAGATCTTATTATTGCAGGTTCTGCA
GTATGTGCATCATGGATAGAACAATATGCAGCACGTACTGTGCTAGGTTCAAGTCAAATT
ACTTGGTGGATCATGGAAAACCGGCGGGAATACTTCGATCGGGCTAAACTTGCTTTCAAC
CGAGTGAAGAAACTTATCTTTCTTTCTGAATCACAGTCTAAGCGGTGGTTAGCTTGGTGT
GAGGAAGAACATATAAAGCTCAAAACTCAGCCTGCACTGGTTCCACTTTCTATTAGTGAT
GAACTGGCTTTTGTAGCAGGCATCCCGTGCTCACTGAGCACTCCGCTATTCAGTCCTGAG
AAGATGCTGGAAAAGAGGCAGCTACTAAGAGATTTTGTGAGGAAAGAAATGGGATTGACA
GACAATGATATGCTTGTCATGTCCTTGAGTAGTATAAACCCTGGAAAGGGTCAGTTTCTG
CTTCTTGAAACAACGCGCTTACTGATTGAGGGAGCTCCTCCTCTAAATGGATCTGCTGTT
AAAAGACGAGAATATCAGAAAAGGACATTGCTTTATAACTGGAAACAATTTGGTGAATGG
AAAAAAGAATCCTCCACCTTGTCAAATAACCCACAAACTGAAACATTGCAGGTACCCCAG
CTTTTCATTAAGGGGGTTAACTATACAGCTGGAATTGAAAATGATAGAGGAACTCGAAAG
CTTTTCTCCCTAACTGAAGGGAAGCAGGGAGAAAAGCTTAAGGTTCTTATTGGCTCAGTC
GGATCCAAGAGCAATAAGGTGCCTTATGTTAAAGCACTTCTCAACTTTCTAAATCAGCAT
TCTAACTTGTCAAACACAGTACTATGGACTCCATCAACCACTCGTGTCGCTGCACTTTAT
GCTGCTGCAGATGCTTATGTAATGAATTCTCAGGGACTTGGAGAAACATTTGGGAGAGTG
ACAATTGAAGCAATGGCATTTGGTCTTCCTGTGCTGGGAACAGATGCCGGAGGCACAAAG
GAGATCGTTGAACATAACGTAACAGGTCTTCTTCATACTTTGGGACGTCCAGGCACTCAA
ATCCTCGCCAACAATCTCCAGTATTTGCTGAACAATCCCTCGGAAAGGCAGCGATTGGGA
AGCAATGGAAGAAAGAAAGTAAAGGATATGTACCTAAAGAAGCACATGTACAAGAGATTC
GGAGAAGTACTATACGACTGCATGAGAATAAAATAA